RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SALL2Q9Y467 1007 aaPredicted RBP21.48■■□□□ 1.03
SPTLC2-203ENST00000554901 ITGB4P16144 1822 aa21.48■■□□□ 1.03
SPTLC2-203ENST00000554901 EP400Q96L91 3159 aa21.47■■□□□ 1.03
SPTLC2-203ENST00000554901 TRIM37O94972 964 aa21.47■■□□□ 1.03
SPTLC2-203ENST00000554901 CCDC125Q86Z20 511 aa21.47■■□□□ 1.03
SPTLC2-203ENST00000554901 SIPA1L3O60292 1781 aaPredicted RBP21.47■■□□□ 1.03
SPTLC2-203ENST00000554901 CFAP44Q96MT7 982 aa21.46■■□□□ 1.03
SPTLC2-203ENST00000554901 IFT57Q9NWB7 429 aa21.46■■□□□ 1.03
SPTLC2-203ENST00000554901 KAT6BQ8WYB5 2073 aa21.46■■□□□ 1.03
SPTLC2-203ENST00000554901 ZBED9Q6R2W3 1325 aa21.46■■□□□ 1.03
SPTLC2-203ENST00000554901 SENP3-EIF4A1A0A087X0R7 540 aa21.45■■□□□ 1.02
SPTLC2-203ENST00000554901 GNAI1P63096 354 aa21.45■■□□□ 1.02
SPTLC2-203ENST00000554901 SMARCC1Q92922 1105 aaPredicted RBP21.45■■□□□ 1.02
SPTLC2-203ENST00000554901 BTBD11A6QL63 1104 aa21.45■■□□□ 1.02
SPTLC2-203ENST00000554901 CHL1O00533 1208 aa21.44■■□□□ 1.02
SPTLC2-203ENST00000554901 ZNF853P0CG23 659 aa21.44■■□□□ 1.02
SPTLC2-203ENST00000554901 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
SPTLC2-203ENST00000554901 ILDR2Q71H61 639 aa21.43■■□□□ 1.02
SPTLC2-203ENST00000554901 ZNF790Q6PG37 636 aa21.42■■□□□ 1.02
SPTLC2-203ENST00000554901 BTAF1O14981 1849 aa21.41■■□□□ 1.02
SPTLC2-203ENST00000554901 PTF1AQ7RTS3 328 aa21.41■■□□□ 1.02
SPTLC2-203ENST00000554901 TTC5Q8N0Z6 440 aa21.41■■□□□ 1.02
SPTLC2-203ENST00000554901 ATG3Q9NT62 314 aa21.41■■□□□ 1.02
SPTLC2-203ENST00000554901 TSPYL4Q9UJ04 414 aa21.41■■□□□ 1.02
SPTLC2-203ENST00000554901 PAPPAQ13219 1627 aa21.41■■□□□ 1.02
SPTLC2-203ENST00000554901 PLSCR1O15162 318 aa21.4■■□□□ 1.02
SPTLC2-203ENST00000554901 SF3B2Q13435 895 aaKnown RBP21.4■■□□□ 1.02
SPTLC2-203ENST00000554901 ASAP1Q9ULH1 1129 aa21.4■■□□□ 1.02
SPTLC2-203ENST00000554901 MYH16Q9H6N6 1097 aa21.39■■□□□ 1.02
SPTLC2-203ENST00000554901 TNS1Q9HBL0 1735 aaKnown RBP21.39■■□□□ 1.02
SPTLC2-203ENST00000554901 E9PSI1 815 aa21.39■■□□□ 1.01
SPTLC2-203ENST00000554901 PALLDQ8WX93 1383 aa21.38■■□□□ 1.01
SPTLC2-203ENST00000554901 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
SPTLC2-203ENST00000554901 APBA3O96018 575 aa21.38■■□□□ 1.01
SPTLC2-203ENST00000554901 HMGB2P26583 209 aaKnown RBP21.38■■□□□ 1.01
SPTLC2-203ENST00000554901 LAS1LQ9Y4W2 734 aaKnown RBP21.38■■□□□ 1.01
SPTLC2-203ENST00000554901 SLC39A6Q13433 755 aa21.37■■□□□ 1.01
SPTLC2-203ENST00000554901 MBIPQ9NS73 344 aa21.37■■□□□ 1.01
SPTLC2-203ENST00000554901 MIS18AQ9NYP9 233 aa21.37■■□□□ 1.01
SPTLC2-203ENST00000554901 VSIG10Q8N0Z9 540 aa21.36■■□□□ 1.01
SPTLC2-203ENST00000554901 FMNL2Q96PY5 1086 aa21.36■■□□□ 1.01
SPTLC2-203ENST00000554901 RGPD3A6NKT7 1758 aaPredicted RBP21.36■■□□□ 1.01
SPTLC2-203ENST00000554901 RGPD4Q7Z3J3 1758 aa21.36■■□□□ 1.01
SPTLC2-203ENST00000554901 UBR2Q8IWV8 1755 aa21.36■■□□□ 1.01
SPTLC2-203ENST00000554901 BAG6P46379 1132 aa21.35■■□□□ 1.01
SPTLC2-203ENST00000554901 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
SPTLC2-203ENST00000554901 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
SPTLC2-203ENST00000554901 EIF4A1P60842 406 aaKnown RBP21.34■■□□□ 1.01
SPTLC2-203ENST00000554901 UPF1Q92900 1129 aaKnown RBP eCLIP21.34■■□□□ 1.01
SPTLC2-203ENST00000554901 LOC102724428A0A0B4J2F2 783 aa21.34■■□□□ 1.01
SPTLC2-203ENST00000554901 SIK1P57059 783 aa21.34■■□□□ 1.01
SPTLC2-203ENST00000554901 TRMT2AQ8IZ69 625 aaKnown RBP21.34■■□□□ 1.01
SPTLC2-203ENST00000554901 ZNF496Q96IT1 587 aaPredicted RBP21.34■■□□□ 1.01
SPTLC2-203ENST00000554901 SPINK5Q9NQ38 1064 aaPredicted RBP21.34■■□□□ 1.01
SPTLC2-203ENST00000554901 HEG1Q9ULI3 1381 aa21.34■■□□□ 1.01
SPTLC2-203ENST00000554901 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1.01
SPTLC2-203ENST00000554901 KCNQ3O43525 872 aa21.33■■□□□ 1
SPTLC2-203ENST00000554901 SLC27A3Q5K4L6 730 aa21.33■■□□□ 1
SPTLC2-203ENST00000554901 FANCIQ9NVI1 1328 aa21.33■■□□□ 1
SPTLC2-203ENST00000554901 LY75O60449 1722 aa21.32■■□□□ 1
SPTLC2-203ENST00000554901 PTCD1O75127 700 aaKnown RBP21.32■■□□□ 1
SPTLC2-203ENST00000554901 SOS1Q07889 1333 aaPredicted RBP21.32■■□□□ 1
SPTLC2-203ENST00000554901 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
SPTLC2-203ENST00000554901 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
SPTLC2-203ENST00000554901 RBM42Q9BTD8 480 aaKnown RBP21.31■■□□□ 1
SPTLC2-203ENST00000554901 TEX13AQ9BXU3 409 aaPredicted RBP21.31■■□□□ 1
SPTLC2-203ENST00000554901 CICQ96RK0 1608 aaPredicted RBP21.31■■□□□ 1
SPTLC2-203ENST00000554901 HOXB7P09629 217 aa21.3■■□□□ 1
SPTLC2-203ENST00000554901 SNRPA1P09661 255 aaKnown RBP21.3■■□□□ 1
SPTLC2-203ENST00000554901 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
SPTLC2-203ENST00000554901 TXNRD1Q16881 649 aa21.29■■□□□ 1
SPTLC2-203ENST00000554901 CAMKK2Q96RR4 588 aa21.29■■□□□ 1
SPTLC2-203ENST00000554901 CCNL1Q9UK58 526 aaPredicted RBP21.29■■□□□ 1
SPTLC2-203ENST00000554901 GIGYF1O75420 1035 aaPredicted RBP21.29■■□□□ 1
SPTLC2-203ENST00000554901 DUSP27Q5VZP5 1158 aa21.29■■□□□ 1
SPTLC2-203ENST00000554901 CHMP4AQ9BY43 222 aa21.29■■□□□ 1
SPTLC2-203ENST00000554901 ATP6V1AP38606 617 aa21.28■■□□□ 1
SPTLC2-203ENST00000554901 SLC4A9Q96Q91 983 aa21.28■■□□□ 1
SPTLC2-203ENST00000554901 EN1Q05925 392 aaPredicted RBP21.27■■□□□ 1
SPTLC2-203ENST00000554901 PROM2Q8N271 834 aa21.26■□□□□ 0.99
SPTLC2-203ENST00000554901 STARD3NLO95772 234 aa21.24■□□□□ 0.99
SPTLC2-203ENST00000554901 CT47B1P0C2W7 299 aaPredicted RBP21.24■□□□□ 0.99
SPTLC2-203ENST00000554901 EXOSC9Q06265 439 aaKnown RBP21.24■□□□□ 0.99
SPTLC2-203ENST00000554901 DEFB132Q7Z7B7 95 aa21.24■□□□□ 0.99
SPTLC2-203ENST00000554901 ITPK1Q13572 414 aa21.24■□□□□ 0.99
SPTLC2-203ENST00000554901 EZH2Q15910 746 aaKnown RBP21.24■□□□□ 0.99
SPTLC2-203ENST00000554901 C8orf58Q8NAV2 365 aa21.24■□□□□ 0.99
SPTLC2-203ENST00000554901 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
SPTLC2-203ENST00000554901 TWISTNBQ3B726 338 aaPredicted RBP21.23■□□□□ 0.99
SPTLC2-203ENST00000554901 DNAJC10Q8IXB1 793 aa21.23■□□□□ 0.99
SPTLC2-203ENST00000554901 TJP1Q07157 1748 aa21.22■□□□□ 0.99
SPTLC2-203ENST00000554901 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
SPTLC2-203ENST00000554901 ZNF428Q96B54 188 aa21.22■□□□□ 0.99
SPTLC2-203ENST00000554901 C5P01031 1676 aa21.22■□□□□ 0.99
SPTLC2-203ENST00000554901 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
SPTLC2-203ENST00000554901 CYP19A1P11511 503 aaPredicted RBP21.21■□□□□ 0.99
SPTLC2-203ENST00000554901 RC3H1Q5TC82 1133 aaKnown RBP21.21■□□□□ 0.99
SPTLC2-203ENST00000554901 USP16Q9Y5T5 823 aa21.21■□□□□ 0.99
SPTLC2-203ENST00000554901 CNTNAP4Q9C0A0 1308 aa21.21■□□□□ 0.99
SPTLC2-203ENST00000554901 RREB1Q92766 1687 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms