RNA–Protein interactions for RNA: ENST00000554182.5

GSKIP-203, Transcript of GSK3B interacting protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GSKIP, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-203ENST00000554182 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
GSKIP-203ENST00000554182 BCL11BQ9C0K0 894 aaPredicted RBP16.42■□□□□ 0.22
GSKIP-203ENST00000554182 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
GSKIP-203ENST00000554182 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
GSKIP-203ENST00000554182 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
GSKIP-203ENST00000554182 DCTN1Q14203 1278 aa16.41■□□□□ 0.22
GSKIP-203ENST00000554182 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
GSKIP-203ENST00000554182 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
GSKIP-203ENST00000554182 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
GSKIP-203ENST00000554182 ZNF853P0CG23 659 aa16.4■□□□□ 0.22
GSKIP-203ENST00000554182 GNAI1P63096 354 aa16.4■□□□□ 0.22
GSKIP-203ENST00000554182 NFATC2IPQ8NCF5 419 aa16.4■□□□□ 0.22
GSKIP-203ENST00000554182 CHL1O00533 1208 aa16.39■□□□□ 0.21
GSKIP-203ENST00000554182 FAM182BQ5T319 152 aa16.39■□□□□ 0.21
GSKIP-203ENST00000554182 PIGBQ92521 554 aa16.39■□□□□ 0.21
GSKIP-203ENST00000554182 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
GSKIP-203ENST00000554182 CAPN15O75808 1086 aa16.38■□□□□ 0.21
GSKIP-203ENST00000554182 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
GSKIP-203ENST00000554182 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
GSKIP-203ENST00000554182 SALL2Q9Y467 1007 aaPredicted RBP16.38■□□□□ 0.21
GSKIP-203ENST00000554182 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
GSKIP-203ENST00000554182 E9PSI1 815 aa16.37■□□□□ 0.21
GSKIP-203ENST00000554182 CCDC125Q86Z20 511 aa16.37■□□□□ 0.21
GSKIP-203ENST00000554182 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
GSKIP-203ENST00000554182 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
GSKIP-203ENST00000554182 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
GSKIP-203ENST00000554182 KCNQ2O43526 872 aa16.36■□□□□ 0.21
GSKIP-203ENST00000554182 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
GSKIP-203ENST00000554182 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
GSKIP-203ENST00000554182 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
GSKIP-203ENST00000554182 TRIM37O94972 964 aa16.34■□□□□ 0.21
GSKIP-203ENST00000554182 HMGB2P26583 209 aaKnown RBP16.34■□□□□ 0.21
GSKIP-203ENST00000554182 TTC5Q8N0Z6 440 aa16.34■□□□□ 0.21
GSKIP-203ENST00000554182 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
GSKIP-203ENST00000554182 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
GSKIP-203ENST00000554182 TRMT2AQ8IZ69 625 aaKnown RBP16.33■□□□□ 0.2
GSKIP-203ENST00000554182 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
GSKIP-203ENST00000554182 PLSCR1O15162 318 aa16.32■□□□□ 0.2
GSKIP-203ENST00000554182 SOS1Q07889 1333 aaPredicted RBP16.32■□□□□ 0.2
GSKIP-203ENST00000554182 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
GSKIP-203ENST00000554182 VSIG10Q8N0Z9 540 aa16.32■□□□□ 0.2
GSKIP-203ENST00000554182 MBIPQ9NS73 344 aa16.32■□□□□ 0.2
GSKIP-203ENST00000554182 TOGARAM1Q9Y4F4 1720 aa16.31■□□□□ 0.2
GSKIP-203ENST00000554182 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
GSKIP-203ENST00000554182 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
GSKIP-203ENST00000554182 ASAP1Q9ULH1 1129 aa16.31■□□□□ 0.2
GSKIP-203ENST00000554182 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
GSKIP-203ENST00000554182 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
GSKIP-203ENST00000554182 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
GSKIP-203ENST00000554182 HOXB7P09629 217 aa16.3■□□□□ 0.2
GSKIP-203ENST00000554182 EIF4A1P60842 406 aaKnown RBP16.3■□□□□ 0.2
GSKIP-203ENST00000554182 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
GSKIP-203ENST00000554182 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
GSKIP-203ENST00000554182 MIS18AQ9NYP9 233 aa16.3■□□□□ 0.2
GSKIP-203ENST00000554182 BRWD3Q6RI45 1802 aa16.3■□□□□ 0.2
GSKIP-203ENST00000554182 SCN11AQ9UI33 1791 aa16.3■□□□□ 0.2
GSKIP-203ENST00000554182 DOT1LQ8TEK3 1739 aa16.29■□□□□ 0.2
GSKIP-203ENST00000554182 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
GSKIP-203ENST00000554182 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
GSKIP-203ENST00000554182 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
GSKIP-203ENST00000554182 APBA3O96018 575 aa16.28■□□□□ 0.2
GSKIP-203ENST00000554182 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
GSKIP-203ENST00000554182 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
GSKIP-203ENST00000554182 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
GSKIP-203ENST00000554182 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
GSKIP-203ENST00000554182 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
GSKIP-203ENST00000554182 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
GSKIP-203ENST00000554182 SIK1P57059 783 aa16.27■□□□□ 0.2
GSKIP-203ENST00000554182 DUSP27Q5VZP5 1158 aa16.27■□□□□ 0.2
GSKIP-203ENST00000554182 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
GSKIP-203ENST00000554182 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
GSKIP-203ENST00000554182 KCPQ6ZWJ8 1503 aa16.26■□□□□ 0.19
GSKIP-203ENST00000554182 KCNQ3O43525 872 aa16.26■□□□□ 0.19
GSKIP-203ENST00000554182 GIGYF1O75420 1035 aaPredicted RBP16.26■□□□□ 0.19
GSKIP-203ENST00000554182 BAG6P46379 1132 aa16.26■□□□□ 0.19
GSKIP-203ENST00000554182 ILDR2Q71H61 639 aa16.26■□□□□ 0.19
GSKIP-203ENST00000554182 PTCD1O75127 700 aaKnown RBP16.25■□□□□ 0.19
GSKIP-203ENST00000554182 PAPPAQ13219 1627 aa16.25■□□□□ 0.19
GSKIP-203ENST00000554182 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
GSKIP-203ENST00000554182 DLG5Q8TDM6 1919 aa16.24■□□□□ 0.19
GSKIP-203ENST00000554182 UPF1Q92900 1129 aaKnown RBP eCLIP16.24■□□□□ 0.19
GSKIP-203ENST00000554182 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
GSKIP-203ENST00000554182 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
GSKIP-203ENST00000554182 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
GSKIP-203ENST00000554182 TXNRD1Q16881 649 aa16.23■□□□□ 0.19
GSKIP-203ENST00000554182 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
GSKIP-203ENST00000554182 CAMKK2Q96RR4 588 aa16.23■□□□□ 0.19
GSKIP-203ENST00000554182 STARD3NLO95772 234 aa16.22■□□□□ 0.19
GSKIP-203ENST00000554182 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
GSKIP-203ENST00000554182 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
GSKIP-203ENST00000554182 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
GSKIP-203ENST00000554182 EP400Q96L91 3159 aa16.22■□□□□ 0.19
GSKIP-203ENST00000554182 ERBB4Q15303 1308 aa16.21■□□□□ 0.19
GSKIP-203ENST00000554182 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
GSKIP-203ENST00000554182 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.18
GSKIP-203ENST00000554182 RC3H1Q5TC82 1133 aaKnown RBP16.2■□□□□ 0.18
GSKIP-203ENST00000554182 PROM2Q8N271 834 aa16.2■□□□□ 0.18
GSKIP-203ENST00000554182 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
GSKIP-203ENST00000554182 ZNF831Q5JPB2 1677 aa16.19■□□□□ 0.18
GSKIP-203ENST00000554182 VAMP4O75379 141 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms