RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 TNS2Q63HR2 1409 aa15.22■□□□□ 0.03
NEK9-202ENST00000553823 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
NEK9-202ENST00000553823 MIS18AQ9NYP9 233 aa15.21■□□□□ 0.03
NEK9-202ENST00000553823 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
NEK9-202ENST00000553823 ATRNO75882 1429 aa15.2■□□□□ 0.02
NEK9-202ENST00000553823 DDB1Q16531 1140 aa15.2■□□□□ 0.02
NEK9-202ENST00000553823 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
NEK9-202ENST00000553823 GJD4Q96KN9 370 aaPredicted RBP15.19■□□□□ 0.02
NEK9-202ENST00000553823 SLC52A2Q9HAB3 445 aa15.19■□□□□ 0.02
NEK9-202ENST00000553823 MRC1P22897 1456 aa15.19■□□□□ 0.02
NEK9-202ENST00000553823 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
NEK9-202ENST00000553823 BTBD11A6QL63 1104 aa15.18■□□□□ 0.02
NEK9-202ENST00000553823 ERVV-2B6SEH9 535 aa15.18■□□□□ 0.02
NEK9-202ENST00000553823 GLI3P10071 1580 aa15.18■□□□□ 0.02
NEK9-202ENST00000553823 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
NEK9-202ENST00000553823 CABP4P57796 275 aa15.17■□□□□ 0.02
NEK9-202ENST00000553823 C8orf58Q8NAV2 365 aa15.17■□□□□ 0.02
NEK9-202ENST00000553823 QTRT2Q9H974 415 aaKnown RBP15.17■□□□□ 0.02
NEK9-202ENST00000553823 RARSP54136 660 aaKnown RBP15.16■□□□□ 0.02
NEK9-202ENST00000553823 TWISTNBQ3B726 338 aaPredicted RBP15.16■□□□□ 0.02
NEK9-202ENST00000553823 TSPYL6Q8N831 410 aa15.16■□□□□ 0.02
NEK9-202ENST00000553823 NFATC2IPQ8NCF5 419 aa15.16■□□□□ 0.02
NEK9-202ENST00000553823 ZNF428Q96B54 188 aa15.16■□□□□ 0.02
NEK9-202ENST00000553823 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
NEK9-202ENST00000553823 ITGB4P16144 1822 aa15.15■□□□□ 0.02
NEK9-202ENST00000553823 TOGARAM1Q9Y4F4 1720 aa15.15■□□□□ 0.02
NEK9-202ENST00000553823 A0A0G2JS52 829 aa15.15■□□□□ 0.02
NEK9-202ENST00000553823 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
NEK9-202ENST00000553823 VAMP4O75379 141 aa15.15■□□□□ 0.02
NEK9-202ENST00000553823 NEFLP07196 543 aa15.15■□□□□ 0.02
NEK9-202ENST00000553823 MYT1Q01538 1121 aa15.15■□□□□ 0.02
NEK9-202ENST00000553823 ZNF772Q68DY9 489 aaPredicted RBP15.15■□□□□ 0.02
NEK9-202ENST00000553823 KCNA4P22459 653 aa15.14■□□□□ 0.01
NEK9-202ENST00000553823 RRP1P56182 461 aaKnown RBP15.14■□□□□ 0.01
NEK9-202ENST00000553823 KRT24Q2M2I5 525 aa15.14■□□□□ 0.01
NEK9-202ENST00000553823 KCNQ3O43525 872 aa15.13■□□□□ 0.01
NEK9-202ENST00000553823 ONECUT3O60422 494 aaPredicted RBP15.13■□□□□ 0.01
NEK9-202ENST00000553823 BCAR3O75815 825 aa15.13■□□□□ 0.01
NEK9-202ENST00000553823 EIF4A1P60842 406 aaKnown RBP15.13■□□□□ 0.01
NEK9-202ENST00000553823 ALDH1L2Q3SY69 923 aa15.13■□□□□ 0.01
NEK9-202ENST00000553823 MARCH10Q8NA82 808 aaPredicted RBP15.13■□□□□ 0.01
NEK9-202ENST00000553823 SOS1Q07889 1333 aaPredicted RBP15.13■□□□□ 0.01
NEK9-202ENST00000553823 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
NEK9-202ENST00000553823 ZNF790Q6PG37 636 aa15.12■□□□□ 0.01
NEK9-202ENST00000553823 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.12■□□□□ 0.01
NEK9-202ENST00000553823 SLC39A6Q13433 755 aa15.11■□□□□ 0.01
NEK9-202ENST00000553823 SSH1Q8WYL5 1049 aa15.11■□□□□ 0.01
NEK9-202ENST00000553823 BCL2L13Q9BXK5 485 aa15.11■□□□□ 0.01
NEK9-202ENST00000553823 SMC4Q9NTJ3 1288 aa15.11■□□□□ 0.01
NEK9-202ENST00000553823 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
NEK9-202ENST00000553823 DOT1LQ8TEK3 1739 aa15.1■□□□□ 0.01
NEK9-202ENST00000553823 TTC5Q8N0Z6 440 aa15.1■□□□□ 0.01
NEK9-202ENST00000553823 HOXB7P09629 217 aa15.09■□□□□ 0.01
NEK9-202ENST00000553823 GTF3C3Q9Y5Q9 886 aa15.09■□□□□ 0.01
NEK9-202ENST00000553823 PAPPAQ13219 1627 aa15.09■□□□□ 0.01
NEK9-202ENST00000553823 HEG1Q9ULI3 1381 aa15.09■□□□□ 0.01
NEK9-202ENST00000553823 PLIN1O60240 522 aa15.08■□□□□ 0
NEK9-202ENST00000553823 BRPF1P55201 1214 aaPredicted RBP15.08■□□□□ 0
NEK9-202ENST00000553823 RBM6P78332 1123 aaKnown RBP15.08■□□□□ 0
NEK9-202ENST00000553823 SEPT12Q8IYM1 358 aa15.08■□□□□ 0
NEK9-202ENST00000553823 PIGBQ92521 554 aa15.08■□□□□ 0
NEK9-202ENST00000553823 CHMP4AQ9BY43 222 aa15.08■□□□□ 0
NEK9-202ENST00000553823 UBR2Q8IWV8 1755 aa15.08■□□□□ 0
NEK9-202ENST00000553823 BCL9O00512 1426 aa15.08■□□□□ 0
NEK9-202ENST00000553823 GIGYF1O75420 1035 aaPredicted RBP15.07■□□□□ 0
NEK9-202ENST00000553823 CANXP27824 592 aaKnown RBP15.07■□□□□ 0
NEK9-202ENST00000553823 PRIM1P49642 420 aaKnown RBP15.07■□□□□ 0
NEK9-202ENST00000553823 FKBP8Q14318 412 aa15.07■□□□□ 0
NEK9-202ENST00000553823 CCDC30Q5VVM6 783 aa15.07■□□□□ 0
NEK9-202ENST00000553823 MRPL50Q8N5N7 158 aaKnown RBP15.07■□□□□ 0
NEK9-202ENST00000553823 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
NEK9-202ENST00000553823 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
NEK9-202ENST00000553823 FMNL2Q96PY5 1086 aa15.07■□□□□ 0
NEK9-202ENST00000553823 KIF16BQ96L93 1317 aa15.07■□□□□ 0
NEK9-202ENST00000553823 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
NEK9-202ENST00000553823 IRX6P78412 446 aaPredicted RBP15.06■□□□□ 0
NEK9-202ENST00000553823 FRAT1Q92837 279 aaPredicted RBP15.06■□□□□ 0
NEK9-202ENST00000553823 BRWD3Q6RI45 1802 aa15.06■□□□□ 0
NEK9-202ENST00000553823 HDGFL1Q5TGJ6 251 aa15.05■□□□□ -0
NEK9-202ENST00000553823 ACSBG1Q96GR2 724 aa15.05■□□□□ -0
NEK9-202ENST00000553823 STK31Q9BXU1 1019 aa15.05■□□□□ -0
NEK9-202ENST00000553823 C5P01031 1676 aa15.04■□□□□ -0
NEK9-202ENST00000553823 KCPQ6ZWJ8 1503 aa15.04■□□□□ -0
NEK9-202ENST00000553823 IPO8O15397 1037 aaKnown RBP15.04■□□□□ -0
NEK9-202ENST00000553823 SNRPA1P09661 255 aaKnown RBP15.04■□□□□ -0
NEK9-202ENST00000553823 EIF2S2P20042 333 aaKnown RBP15.04■□□□□ -0
NEK9-202ENST00000553823 ZKSCAN2Q63HK3 967 aa15.04■□□□□ -0
NEK9-202ENST00000553823 ATG3Q9NT62 314 aa15.04■□□□□ -0
NEK9-202ENST00000553823 ASAP1Q9ULH1 1129 aa15.04■□□□□ -0
NEK9-202ENST00000553823 NOB1Q9ULX3 412 aaKnown RBP15.04■□□□□ -0
NEK9-202ENST00000553823 SLC4A2P04920 1241 aa15.03■□□□□ -0
NEK9-202ENST00000553823 RXRBP28702 533 aa15.03■□□□□ -0
NEK9-202ENST00000553823 PDE3AQ14432 1141 aa15.03■□□□□ -0
NEK9-202ENST00000553823 NECTIN2Q92692 538 aa15.03■□□□□ -0
NEK9-202ENST00000553823 RGS17Q9UGC6 210 aaPredicted RBP15.03■□□□□ -0
NEK9-202ENST00000553823 SBF2Q86WG5 1849 aa15.03■□□□□ -0
NEK9-202ENST00000553823 PRAMEF22A3QJZ6 481 aa15.02■□□□□ -0
NEK9-202ENST00000553823 PTCD1O75127 700 aaKnown RBP15.02■□□□□ -0
NEK9-202ENST00000553823 MS4A1P11836 297 aa15.02■□□□□ -0
NEK9-202ENST00000553823 LAMB4A4D0S4 1761 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms