RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 RNF135Q8IUD6 432 aa7.76□□□□□ -1.17
ATXN3-220ENST00000553491 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 SLC35F4A4IF30 521 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 PIK3CDO00329 1044 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 VSIG8P0DPA2 414 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 ARID3AQ99856 593 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 HRH3Q9Y5N1 445 aa7.75□□□□□ -1.17
ATXN3-220ENST00000553491 CLN3Q13286 438 aa7.74□□□□□ -1.17
ATXN3-220ENST00000553491 PLPP7Q8NBV4 271 aa7.74□□□□□ -1.17
ATXN3-220ENST00000553491 SLC16A10Q8TF71 515 aa7.74□□□□□ -1.17
ATXN3-220ENST00000553491 GNRH1P01148 92 aa7.73□□□□□ -1.17
ATXN3-220ENST00000553491 GPC1P35052 558 aa7.73□□□□□ -1.17
ATXN3-220ENST00000553491 MAP7D1Q3KQU3 841 aa7.73□□□□□ -1.17
ATXN3-220ENST00000553491 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-220ENST00000553491 GRIP2Q9C0E4 1043 aa7.73□□□□□ -1.17
ATXN3-220ENST00000553491 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
ATXN3-220ENST00000553491 MAGI1Q96QZ7 1491 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-220ENST00000553491 IL2RAP01589 272 aa7.72□□□□□ -1.17
ATXN3-220ENST00000553491 GMPRP36959 345 aa7.72□□□□□ -1.17
ATXN3-220ENST00000553491 USP4Q13107 963 aa7.72□□□□□ -1.17
ATXN3-220ENST00000553491 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
ATXN3-220ENST00000553491 CCDC82Q8N4S0 544 aa7.72□□□□□ -1.17
ATXN3-220ENST00000553491 CCDC155Q8N6L0 562 aa7.72□□□□□ -1.17
ATXN3-220ENST00000553491 IRF7Q92985 503 aa7.72□□□□□ -1.17
ATXN3-220ENST00000553491 KIF27Q86VH2 1401 aa7.71□□□□□ -1.17
ATXN3-220ENST00000553491 SYNJ2O15056 1496 aa7.71□□□□□ -1.18
ATXN3-220ENST00000553491 MEN1O00255 615 aa7.71□□□□□ -1.18
ATXN3-220ENST00000553491 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
ATXN3-220ENST00000553491 MYCP01106 439 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-220ENST00000553491 CYB5RLQ6IPT4 315 aa7.71□□□□□ -1.18
ATXN3-220ENST00000553491 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
ATXN3-220ENST00000553491 XAGE2Q96GT9 111 aa7.71□□□□□ -1.18
ATXN3-220ENST00000553491 RAB6BQ9NRW1 208 aa7.71□□□□□ -1.18
ATXN3-220ENST00000553491 RIMBP3CA6NJZ7 1639 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 RIMBP3BA6NNM3 1639 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 RIMBP3Q9UFD9 1639 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-220ENST00000553491 OXLD1Q5BKU9 147 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 WWC1Q8IX03 1113 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 NANOS1Q8WY41 292 aaKnown RBP7.7□□□□□ -1.18
ATXN3-220ENST00000553491 UCN2Q96RP3 112 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 ESYT1Q9BSJ8 1104 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 ETNK1Q9HBU6 452 aa7.7□□□□□ -1.18
ATXN3-220ENST00000553491 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-220ENST00000553491 ERICH3Q5RHP9 1530 aa7.69□□□□□ -1.18
ATXN3-220ENST00000553491 RUSC2Q8N2Y8 1516 aa7.69□□□□□ -1.18
ATXN3-220ENST00000553491 SCNN1DP51172 638 aa7.69□□□□□ -1.18
ATXN3-220ENST00000553491 CENPCQ03188 943 aa7.69□□□□□ -1.18
ATXN3-220ENST00000553491 HDGFL1Q5TGJ6 251 aa7.69□□□□□ -1.18
ATXN3-220ENST00000553491 GPR161Q8N6U8 529 aaKnown RBP7.69□□□□□ -1.18
ATXN3-220ENST00000553491 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
ATXN3-220ENST00000553491 FHDC1Q9C0D6 1143 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-220ENST00000553491 ADAMTS12P58397 1594 aa7.68□□□□□ -1.18
ATXN3-220ENST00000553491 SPATA31C2B4DYI2 1134 aa7.68□□□□□ -1.18
ATXN3-220ENST00000553491 ITGA6P23229 1130 aa7.68□□□□□ -1.18
ATXN3-220ENST00000553491 NLRP3Q96P20 1036 aa7.68□□□□□ -1.18
ATXN3-220ENST00000553491 ESF1Q9H501 851 aaKnown RBP7.68□□□□□ -1.18
ATXN3-220ENST00000553491 PCDHGA11Q9Y5H2 935 aa7.68□□□□□ -1.18
ATXN3-220ENST00000553491 FHAD1B1AJZ9 1412 aa7.68□□□□□ -1.18
ATXN3-220ENST00000553491 CUL7Q14999 1698 aa7.67□□□□□ -1.18
ATXN3-220ENST00000553491 SKIP12755 728 aa7.67□□□□□ -1.18
ATXN3-220ENST00000553491 RHOQP17081 205 aa7.67□□□□□ -1.18
ATXN3-220ENST00000553491 POU4F2Q12837 409 aa7.67□□□□□ -1.18
ATXN3-220ENST00000553491 SIRT1Q96EB6 747 aa7.67□□□□□ -1.18
ATXN3-220ENST00000553491 GRIN2AQ12879 1464 aa7.67□□□□□ -1.18
ATXN3-220ENST00000553491 TBC1D9Q6ZT07 1266 aa7.66□□□□□ -1.18
ATXN3-220ENST00000553491 CUEDC1Q9NWM3 386 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-220ENST00000553491 IGF1RP08069 1367 aa7.66□□□□□ -1.18
ATXN3-220ENST00000553491 TMEM229AB2RXF0 380 aa7.65□□□□□ -1.18
ATXN3-220ENST00000553491 WASLO00401 505 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-220ENST00000553491 ARHGEF11O15085 1522 aa7.65□□□□□ -1.18
ATXN3-220ENST00000553491 LZTS3O60299 673 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-220ENST00000553491 RANGAP1P46060 587 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-220ENST00000553491 KRT76Q01546 638 aa7.65□□□□□ -1.18
ATXN3-220ENST00000553491 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
ATXN3-220ENST00000553491 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
ATXN3-220ENST00000553491 CEP170Q5SW79 1584 aa7.65□□□□□ -1.18
ATXN3-220ENST00000553491 CARMIL1Q5VZK9 1371 aa7.65□□□□□ -1.18
ATXN3-220ENST00000553491 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.18
ATXN3-220ENST00000553491 NBPF15Q8N660 670 aa7.65□□□□□ -1.18
ATXN3-220ENST00000553491 USP17L5A8MUK1 530 aa7.64□□□□□ -1.19
ATXN3-220ENST00000553491 INHAP05111 366 aa7.64□□□□□ -1.19
ATXN3-220ENST00000553491 NCOA4Q13772 614 aa7.64□□□□□ -1.19
ATXN3-220ENST00000553491 ESCO1Q5FWF5 840 aa7.64□□□□□ -1.19
ATXN3-220ENST00000553491 PLEKHM2Q8IWE5 1019 aa7.64□□□□□ -1.19
ATXN3-220ENST00000553491 GLMNQ92990 594 aa7.64□□□□□ -1.19
ATXN3-220ENST00000553491 SERPINA10Q9UK55 444 aa7.64□□□□□ -1.19
ATXN3-220ENST00000553491 GDF10P55107 478 aa7.63□□□□□ -1.19
ATXN3-220ENST00000553491 EML3Q32P44 896 aa7.63□□□□□ -1.19
ATXN3-220ENST00000553491 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
ATXN3-220ENST00000553491 CCDC97Q96F63 343 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-220ENST00000553491 CALR3Q96L12 384 aaKnown RBP7.63□□□□□ -1.19
ATXN3-220ENST00000553491 DYRK1BQ9Y463 629 aa7.63□□□□□ -1.19
ATXN3-220ENST00000553491 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
ATXN3-220ENST00000553491 ZBTB7BO15156 539 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms