RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
LETMD1-221ENST00000550100 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
LETMD1-221ENST00000550100 SCN11AQ9UI33 1791 aa15.9■□□□□ 0.14
LETMD1-221ENST00000550100 RNMTO43148 476 aaKnown RBP15.9■□□□□ 0.14
LETMD1-221ENST00000550100 ATP6V1AP38606 617 aa15.9■□□□□ 0.14
LETMD1-221ENST00000550100 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
LETMD1-221ENST00000550100 C4BP0C0L5 1744 aa15.9■□□□□ 0.14
LETMD1-221ENST00000550100 PPP1R1BQ9UD71 204 aaPredicted RBP15.89■□□□□ 0.13
LETMD1-221ENST00000550100 UTRNP46939 3433 aa15.88■□□□□ 0.13
LETMD1-221ENST00000550100 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
LETMD1-221ENST00000550100 COL24A1Q17RW2 1714 aa15.88■□□□□ 0.13
LETMD1-221ENST00000550100 PTCD1O75127 700 aaKnown RBP15.87■□□□□ 0.13
LETMD1-221ENST00000550100 MSL1Q68DK7 614 aa15.87■□□□□ 0.13
LETMD1-221ENST00000550100 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
LETMD1-221ENST00000550100 UBR3Q6ZT12 1888 aa15.87■□□□□ 0.13
LETMD1-221ENST00000550100 IL17REQ8NFR9 667 aa15.87■□□□□ 0.13
LETMD1-221ENST00000550100 FHDC1Q9C0D6 1143 aaPredicted RBP15.87■□□□□ 0.13
LETMD1-221ENST00000550100 MSH5O43196 834 aa15.86■□□□□ 0.13
LETMD1-221ENST00000550100 PRKAR2BP31323 418 aa15.86■□□□□ 0.13
LETMD1-221ENST00000550100 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
LETMD1-221ENST00000550100 SLC16A10Q8TF71 515 aa15.86■□□□□ 0.13
LETMD1-221ENST00000550100 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
LETMD1-221ENST00000550100 SLC52A2Q9HAB3 445 aa15.86■□□□□ 0.13
LETMD1-221ENST00000550100 ADAMTS7Q9UKP4 1686 aa15.86■□□□□ 0.13
LETMD1-221ENST00000550100 MYH14Q7Z406 1995 aaKnown RBP15.85■□□□□ 0.13
LETMD1-221ENST00000550100 PHF14O94880 888 aa15.85■□□□□ 0.13
LETMD1-221ENST00000550100 ARXQ96QS3 562 aa15.85■□□□□ 0.13
LETMD1-221ENST00000550100 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.84■□□□□ 0.13
LETMD1-221ENST00000550100 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
LETMD1-221ENST00000550100 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
LETMD1-221ENST00000550100 AK7Q96M32 723 aa15.84■□□□□ 0.13
LETMD1-221ENST00000550100 SYT17Q9BSW7 474 aa15.84■□□□□ 0.13
LETMD1-221ENST00000550100 GOLGB1Q14789 3259 aaKnown RBP15.84■□□□□ 0.13
LETMD1-221ENST00000550100 MRC1P22897 1456 aa15.83■□□□□ 0.13
LETMD1-221ENST00000550100 GNPATO15228 680 aa15.83■□□□□ 0.12
LETMD1-221ENST00000550100 NUDCQ9Y266 331 aa15.82■□□□□ 0.12
LETMD1-221ENST00000550100 MAP3K5Q99683 1374 aa15.81■□□□□ 0.12
LETMD1-221ENST00000550100 COL5A3P25940 1745 aaPredicted RBP15.81■□□□□ 0.12
LETMD1-221ENST00000550100 ZNF831Q5JPB2 1677 aa15.81■□□□□ 0.12
LETMD1-221ENST00000550100 GNAT3A8MTJ3 354 aa15.81■□□□□ 0.12
LETMD1-221ENST00000550100 FCHSD2O94868 740 aa15.81■□□□□ 0.12
LETMD1-221ENST00000550100 TJP1Q07157 1748 aa15.81■□□□□ 0.12
LETMD1-221ENST00000550100 INTS5Q6P9B9 1019 aaKnown RBP15.8■□□□□ 0.12
LETMD1-221ENST00000550100 DNAJC10Q8IXB1 793 aa15.8■□□□□ 0.12
LETMD1-221ENST00000550100 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
LETMD1-221ENST00000550100 KCPQ6ZWJ8 1503 aa15.8■□□□□ 0.12
LETMD1-221ENST00000550100 KCNQ3O43525 872 aa15.79■□□□□ 0.12
LETMD1-221ENST00000550100 SSFA2P28290 1259 aa15.79■□□□□ 0.12
LETMD1-221ENST00000550100 RC3H1Q5TC82 1133 aaKnown RBP15.79■□□□□ 0.12
LETMD1-221ENST00000550100 FLAD1Q8NFF5 587 aa15.79■□□□□ 0.12
LETMD1-221ENST00000550100 PLEKHF1Q96S99 279 aa15.79■□□□□ 0.12
LETMD1-221ENST00000550100 CRKLP46109 303 aaKnown RBP15.78■□□□□ 0.12
LETMD1-221ENST00000550100 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
LETMD1-221ENST00000550100 NLGN2Q8NFZ4 835 aa15.78■□□□□ 0.12
LETMD1-221ENST00000550100 ARHGEF1Q92888 912 aaKnown RBP15.78■□□□□ 0.12
LETMD1-221ENST00000550100 CEMIPQ8WUJ3 1361 aa15.78■□□□□ 0.12
LETMD1-221ENST00000550100 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
LETMD1-221ENST00000550100 RPS6KA4O75676 772 aa15.78■□□□□ 0.12
LETMD1-221ENST00000550100 POLD1P28340 1107 aa15.78■□□□□ 0.12
LETMD1-221ENST00000550100 RALBP1Q15311 655 aa15.78■□□□□ 0.12
LETMD1-221ENST00000550100 MCM10Q7L590 875 aa15.78■□□□□ 0.12
LETMD1-221ENST00000550100 SIPA1L3O60292 1781 aaPredicted RBP15.77■□□□□ 0.12
LETMD1-221ENST00000550100 CYP19A1P11511 503 aaPredicted RBP15.76■□□□□ 0.11
LETMD1-221ENST00000550100 TRAPPC3LQ5T215 181 aa15.76■□□□□ 0.11
LETMD1-221ENST00000550100 KLHL34Q8N239 644 aa15.76■□□□□ 0.11
LETMD1-221ENST00000550100 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
LETMD1-221ENST00000550100 RTCBQ9Y3I0 505 aaKnown RBP15.76■□□□□ 0.11
LETMD1-221ENST00000550100 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
LETMD1-221ENST00000550100 CICQ96RK0 1608 aaPredicted RBP15.74■□□□□ 0.11
LETMD1-221ENST00000550100 HMGB2P26583 209 aaKnown RBP15.74■□□□□ 0.11
LETMD1-221ENST00000550100 ZNF790Q6PG37 636 aa15.74■□□□□ 0.11
LETMD1-221ENST00000550100 SRP68Q9UHB9 627 aaKnown RBP15.74■□□□□ 0.11
LETMD1-221ENST00000550100 GYS1P13807 737 aa15.73■□□□□ 0.11
LETMD1-221ENST00000550100 ZEB1P37275 1124 aaPredicted RBP15.73■□□□□ 0.11
LETMD1-221ENST00000550100 TEFQ10587 303 aa15.73■□□□□ 0.11
LETMD1-221ENST00000550100 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
LETMD1-221ENST00000550100 CCDC87Q9NVE4 849 aa15.72■□□□□ 0.11
LETMD1-221ENST00000550100 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
LETMD1-221ENST00000550100 C4AP0C0L4 1744 aa15.72■□□□□ 0.11
LETMD1-221ENST00000550100 DLG5Q8TDM6 1919 aa15.72■□□□□ 0.11
LETMD1-221ENST00000550100 PRAMEF22A3QJZ6 481 aa15.71■□□□□ 0.11
LETMD1-221ENST00000550100 THUMPD2Q9BTF0 503 aaKnown RBP15.71■□□□□ 0.11
LETMD1-221ENST00000550100 MIS18AQ9NYP9 233 aa15.71■□□□□ 0.11
LETMD1-221ENST00000550100 ZBTB1Q9Y2K1 713 aa15.71■□□□□ 0.11
LETMD1-221ENST00000550100 BTBD11A6QL63 1104 aa15.71■□□□□ 0.1
LETMD1-221ENST00000550100 MMP10P09238 476 aa15.71■□□□□ 0.1
LETMD1-221ENST00000550100 ADRA2BP18089 450 aa15.71■□□□□ 0.1
LETMD1-221ENST00000550100 VSIG10Q8N0Z9 540 aa15.71■□□□□ 0.1
LETMD1-221ENST00000550100 SOS1Q07889 1333 aaPredicted RBP15.7■□□□□ 0.1
LETMD1-221ENST00000550100 RFC4P35249 363 aa15.7■□□□□ 0.1
LETMD1-221ENST00000550100 FKBP8Q14318 412 aa15.7■□□□□ 0.1
LETMD1-221ENST00000550100 HEG1Q9ULI3 1381 aa15.69■□□□□ 0.1
LETMD1-221ENST00000550100 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
LETMD1-221ENST00000550100 YBX3P16989 372 aaKnown RBP eCLIP15.69■□□□□ 0.15e-13■■□□□ 14.4
LETMD1-221ENST00000550100 NFE2L2Q16236 605 aa15.69■□□□□ 0.1
LETMD1-221ENST00000550100 TTC5Q8N0Z6 440 aa15.69■□□□□ 0.1
LETMD1-221ENST00000550100 A1BGP04217 495 aa15.68■□□□□ 0.1
LETMD1-221ENST00000550100 CANXP27824 592 aaKnown RBP15.68■□□□□ 0.1
LETMD1-221ENST00000550100 CCDC184Q52MB2 194 aa15.68■□□□□ 0.1
LETMD1-221ENST00000550100 RTF1Q92541 710 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms