RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 PNPLA7Q6ZV29 1317 aa15.98■□□□□ 0.15
AC007540.1-201ENST00000548473 FCHSD2O94868 740 aa15.98■□□□□ 0.15
AC007540.1-201ENST00000548473 HMGB2P26583 209 aaKnown RBP15.98■□□□□ 0.15
AC007540.1-201ENST00000548473 ITPK1Q13572 414 aa15.98■□□□□ 0.15
AC007540.1-201ENST00000548473 LINC00116Q8NCU8 138 aa15.98■□□□□ 0.15
AC007540.1-201ENST00000548473 MTFR1LQ9H019 292 aa15.98■□□□□ 0.15
AC007540.1-201ENST00000548473 SLC52A2Q9HAB3 445 aa15.98■□□□□ 0.15
AC007540.1-201ENST00000548473 PPP1R1BQ9UD71 204 aaPredicted RBP15.98■□□□□ 0.15
AC007540.1-201ENST00000548473 MSH5O43196 834 aa15.97■□□□□ 0.15
AC007540.1-201ENST00000548473 SLC4A9Q96Q91 983 aa15.97■□□□□ 0.15
AC007540.1-201ENST00000548473 GNAT3A8MTJ3 354 aa15.96■□□□□ 0.15
AC007540.1-201ENST00000548473 PTCD1O75127 700 aaKnown RBP15.96■□□□□ 0.15
AC007540.1-201ENST00000548473 PTGER2P43116 358 aa15.96■□□□□ 0.15
AC007540.1-201ENST00000548473 COL23A1Q86Y22 540 aaPredicted RBP15.96■□□□□ 0.15
AC007540.1-201ENST00000548473 AK7Q96M32 723 aa15.96■□□□□ 0.15
AC007540.1-201ENST00000548473 ZNF316A6NFI3 1004 aaPredicted RBP15.95■□□□□ 0.14
AC007540.1-201ENST00000548473 SMIM5Q71RC9 77 aa15.95■□□□□ 0.14
AC007540.1-201ENST00000548473 IL17REQ8NFR9 667 aa15.95■□□□□ 0.14
AC007540.1-201ENST00000548473 SLC16A10Q8TF71 515 aa15.95■□□□□ 0.14
AC007540.1-201ENST00000548473 MAP3K5Q99683 1374 aa15.95■□□□□ 0.14
AC007540.1-201ENST00000548473 SCN11AQ9UI33 1791 aa15.95■□□□□ 0.14
AC007540.1-201ENST00000548473 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
AC007540.1-201ENST00000548473 SLC39A6Q13433 755 aa15.94■□□□□ 0.14
AC007540.1-201ENST00000548473 C5P01031 1676 aa15.94■□□□□ 0.14
AC007540.1-201ENST00000548473 PHF14O94880 888 aa15.93■□□□□ 0.14
AC007540.1-201ENST00000548473 AMIGO3Q86WK7 504 aa15.93■□□□□ 0.14
AC007540.1-201ENST00000548473 TAF1LQ8IZX4 1826 aa15.93■□□□□ 0.14
AC007540.1-201ENST00000548473 C4BP0C0L5 1744 aa15.92■□□□□ 0.14
AC007540.1-201ENST00000548473 GNPATO15228 680 aa15.92■□□□□ 0.14
AC007540.1-201ENST00000548473 TEFQ10587 303 aa15.92■□□□□ 0.14
AC007540.1-201ENST00000548473 FLAD1Q8NFF5 587 aa15.92■□□□□ 0.14
AC007540.1-201ENST00000548473 SGIP1Q9BQI5 828 aa15.92■□□□□ 0.14
AC007540.1-201ENST00000548473 PRKRIP1Q9H875 184 aaPredicted RBP15.92■□□□□ 0.14
AC007540.1-201ENST00000548473 TUBGCP6Q96RT7 1819 aa15.91■□□□□ 0.14
AC007540.1-201ENST00000548473 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.91■□□□□ 0.14
AC007540.1-201ENST00000548473 NEFMP07197 916 aa15.91■□□□□ 0.14
AC007540.1-201ENST00000548473 QSER1Q2KHR3 1735 aa15.91■□□□□ 0.14
AC007540.1-201ENST00000548473 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
AC007540.1-201ENST00000548473 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
AC007540.1-201ENST00000548473 MRC1P22897 1456 aa15.9■□□□□ 0.14
AC007540.1-201ENST00000548473 POLD1P28340 1107 aa15.89■□□□□ 0.13
AC007540.1-201ENST00000548473 DCTN1Q14203 1278 aa15.89■□□□□ 0.13
AC007540.1-201ENST00000548473 RC3H1Q5TC82 1133 aaKnown RBP15.89■□□□□ 0.13
AC007540.1-201ENST00000548473 MCM10Q7L590 875 aa15.89■□□□□ 0.13
AC007540.1-201ENST00000548473 ARXQ96QS3 562 aa15.89■□□□□ 0.13
AC007540.1-201ENST00000548473 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
AC007540.1-201ENST00000548473 ADAMTS7Q9UKP4 1686 aa15.89■□□□□ 0.13
AC007540.1-201ENST00000548473 SSFA2P28290 1259 aa15.88■□□□□ 0.13
AC007540.1-201ENST00000548473 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
AC007540.1-201ENST00000548473 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
AC007540.1-201ENST00000548473 PNNQ9H307 717 aaKnown RBP15.88■□□□□ 0.13
AC007540.1-201ENST00000548473 RTCBQ9Y3I0 505 aaKnown RBP15.88■□□□□ 0.13
AC007540.1-201ENST00000548473 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
AC007540.1-201ENST00000548473 CNTNAP4Q9C0A0 1308 aa15.87■□□□□ 0.13
AC007540.1-201ENST00000548473 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
AC007540.1-201ENST00000548473 BTBD11A6QL63 1104 aa15.86■□□□□ 0.13
AC007540.1-201ENST00000548473 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
AC007540.1-201ENST00000548473 RPS6KA4O75676 772 aa15.86■□□□□ 0.13
AC007540.1-201ENST00000548473 CRKLP46109 303 aaKnown RBP15.86■□□□□ 0.13
AC007540.1-201ENST00000548473 TRAPPC3LQ5T215 181 aa15.86■□□□□ 0.13
AC007540.1-201ENST00000548473 ZNF790Q6PG37 636 aa15.86■□□□□ 0.13
AC007540.1-201ENST00000548473 FHDC1Q9C0D6 1143 aaPredicted RBP15.86■□□□□ 0.13
AC007540.1-201ENST00000548473 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
AC007540.1-201ENST00000548473 UBR3Q6ZT12 1888 aa15.85■□□□□ 0.13
AC007540.1-201ENST00000548473 KCNQ3O43525 872 aa15.85■□□□□ 0.13
AC007540.1-201ENST00000548473 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
AC007540.1-201ENST00000548473 ZNF831Q5JPB2 1677 aa15.84■□□□□ 0.13
AC007540.1-201ENST00000548473 WDR43Q15061 677 aaKnown RBP eCLIP15.84■□□□□ 0.13
AC007540.1-201ENST00000548473 INTS5Q6P9B9 1019 aaKnown RBP15.84■□□□□ 0.13
AC007540.1-201ENST00000548473 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
AC007540.1-201ENST00000548473 ARHGEF1Q92888 912 aaKnown RBP15.84■□□□□ 0.13
AC007540.1-201ENST00000548473 ZNF496Q96IT1 587 aaPredicted RBP15.84■□□□□ 0.13
AC007540.1-201ENST00000548473 SYT17Q9BSW7 474 aa15.84■□□□□ 0.13
AC007540.1-201ENST00000548473 KCPQ6ZWJ8 1503 aa15.84■□□□□ 0.13
AC007540.1-201ENST00000548473 CYP19A1P11511 503 aaPredicted RBP15.83■□□□□ 0.12
AC007540.1-201ENST00000548473 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
AC007540.1-201ENST00000548473 VSIG10Q8N0Z9 540 aa15.83■□□□□ 0.12
AC007540.1-201ENST00000548473 ADRA2BP18089 450 aa15.82■□□□□ 0.12
AC007540.1-201ENST00000548473 RFC4P35249 363 aa15.82■□□□□ 0.12
AC007540.1-201ENST00000548473 FMNL2Q96PY5 1086 aa15.82■□□□□ 0.12
AC007540.1-201ENST00000548473 CCDC87Q9NVE4 849 aa15.82■□□□□ 0.12
AC007540.1-201ENST00000548473 ADAMTS8Q9UP79 889 aa15.82■□□□□ 0.12
AC007540.1-201ENST00000548473 COL5A3P25940 1745 aaPredicted RBP15.82■□□□□ 0.12
AC007540.1-201ENST00000548473 TJP1Q07157 1748 aa15.82■□□□□ 0.12
AC007540.1-201ENST00000548473 RIPK4P57078 832 aa15.81■□□□□ 0.12
AC007540.1-201ENST00000548473 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
AC007540.1-201ENST00000548473 MYH14Q7Z406 1995 aaKnown RBP15.81■□□□□ 0.12
AC007540.1-201ENST00000548473 THUMPD2Q9BTF0 503 aaKnown RBP15.81■□□□□ 0.12
AC007540.1-201ENST00000548473 MIS18AQ9NYP9 233 aa15.81■□□□□ 0.12
AC007540.1-201ENST00000548473 HEG1Q9ULI3 1381 aa15.8■□□□□ 0.12
AC007540.1-201ENST00000548473 STARD3NLO95772 234 aa15.8■□□□□ 0.12
AC007540.1-201ENST00000548473 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
AC007540.1-201ENST00000548473 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
AC007540.1-201ENST00000548473 TMPOP42166 694 aaKnown RBP15.79■□□□□ 0.12
AC007540.1-201ENST00000548473 NEUROD2Q15784 382 aa15.79■□□□□ 0.12
AC007540.1-201ENST00000548473 SRP68Q9UHB9 627 aaKnown RBP15.79■□□□□ 0.12
AC007540.1-201ENST00000548473 ZBTB1Q9Y2K1 713 aa15.79■□□□□ 0.12
AC007540.1-201ENST00000548473 RRP7AQ9Y3A4 280 aaKnown RBP15.79■□□□□ 0.12
AC007540.1-201ENST00000548473 COL24A1Q17RW2 1714 aa15.79■□□□□ 0.12
AC007540.1-201ENST00000548473 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms