RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 UBR3Q6ZT12 1888 aa14.64□□□□□ -0.07
GCN1-202ENST00000547263 RNMTO43148 476 aaKnown RBP14.64□□□□□ -0.07
GCN1-202ENST00000547263 PRKAR2BP31323 418 aa14.64□□□□□ -0.07
GCN1-202ENST00000547263 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
GCN1-202ENST00000547263 TJP1Q07157 1748 aa14.63□□□□□ -0.07
GCN1-202ENST00000547263 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
GCN1-202ENST00000547263 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.07
GCN1-202ENST00000547263 ZNF827Q17R98 1081 aa14.63□□□□□ -0.07
GCN1-202ENST00000547263 LGR6Q9HBX8 967 aa14.63□□□□□ -0.07
GCN1-202ENST00000547263 ASAP1Q9ULH1 1129 aa14.63□□□□□ -0.07
GCN1-202ENST00000547263 KCPQ6ZWJ8 1503 aa14.62□□□□□ -0.07
GCN1-202ENST00000547263 SLC52A2Q9HAB3 445 aa14.62□□□□□ -0.07
GCN1-202ENST00000547263 CCNL1Q9UK58 526 aaPredicted RBP14.62□□□□□ -0.07
GCN1-202ENST00000547263 LOC102724428A0A0B4J2F2 783 aa14.61□□□□□ -0.07
GCN1-202ENST00000547263 HMGB2P26583 209 aaKnown RBP14.61□□□□□ -0.07
GCN1-202ENST00000547263 SIK1P57059 783 aa14.61□□□□□ -0.07
GCN1-202ENST00000547263 IL17REQ8NFR9 667 aa14.61□□□□□ -0.07
GCN1-202ENST00000547263 SLC4A9Q96Q91 983 aa14.61□□□□□ -0.07
GCN1-202ENST00000547263 STK32BQ9NY57 414 aa14.61□□□□□ -0.07
GCN1-202ENST00000547263 GNAT3A8MTJ3 354 aa14.6□□□□□ -0.07
GCN1-202ENST00000547263 KCNQ4P56696 695 aa14.6□□□□□ -0.07
GCN1-202ENST00000547263 CABP4P57796 275 aa14.6□□□□□ -0.07
GCN1-202ENST00000547263 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
GCN1-202ENST00000547263 HTATSF1O43719 755 aaKnown RBP14.59□□□□□ -0.07
GCN1-202ENST00000547263 ITPK1Q13572 414 aa14.59□□□□□ -0.07
GCN1-202ENST00000547263 PDGFDQ9GZP0 370 aaPredicted RBP14.59□□□□□ -0.07
GCN1-202ENST00000547263 MYH14Q7Z406 1995 aaKnown RBP14.59□□□□□ -0.07
GCN1-202ENST00000547263 PNPLA7Q6ZV29 1317 aa14.59□□□□□ -0.07
GCN1-202ENST00000547263 SGIP1Q9BQI5 828 aa14.57□□□□□ -0.08
GCN1-202ENST00000547263 LINC00116Q8NCU8 138 aa14.56□□□□□ -0.08
GCN1-202ENST00000547263 SLC16A10Q8TF71 515 aa14.56□□□□□ -0.08
GCN1-202ENST00000547263 KDM3BQ7LBC6 1761 aa14.55□□□□□ -0.08
GCN1-202ENST00000547263 PNNQ9H307 717 aaKnown RBP14.55□□□□□ -0.08
GCN1-202ENST00000547263 CNTNAP4Q9C0A0 1308 aa14.55□□□□□ -0.08
GCN1-202ENST00000547263 PTGER2P43116 358 aa14.54□□□□□ -0.08
GCN1-202ENST00000547263 NFE2L2Q16236 605 aa14.54□□□□□ -0.08
GCN1-202ENST00000547263 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
GCN1-202ENST00000547263 AMIGO3Q86WK7 504 aa14.54□□□□□ -0.08
GCN1-202ENST00000547263 C4AP0C0L4 1744 aa14.53□□□□□ -0.08
GCN1-202ENST00000547263 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
GCN1-202ENST00000547263 VSIG10Q8N0Z9 540 aa14.53□□□□□ -0.08
GCN1-202ENST00000547263 MTFR1LQ9H019 292 aa14.53□□□□□ -0.08
GCN1-202ENST00000547263 SPON1Q9HCB6 807 aa14.53□□□□□ -0.08
GCN1-202ENST00000547263 COL23A1Q86Y22 540 aaPredicted RBP14.52□□□□□ -0.09
GCN1-202ENST00000547263 SSFA2P28290 1259 aa14.51□□□□□ -0.09
GCN1-202ENST00000547263 SLC39A6Q13433 755 aa14.51□□□□□ -0.09
GCN1-202ENST00000547263 CCDC184Q52MB2 194 aa14.51□□□□□ -0.09
GCN1-202ENST00000547263 ZNF790Q6PG37 636 aa14.51□□□□□ -0.09
GCN1-202ENST00000547263 FLAD1Q8NFF5 587 aa14.51□□□□□ -0.09
GCN1-202ENST00000547263 TFCP2L1Q9NZI6 479 aa14.51□□□□□ -0.09
GCN1-202ENST00000547263 ADAMTS8Q9UP79 889 aa14.51□□□□□ -0.09
GCN1-202ENST00000547263 TMPOP42166 694 aaKnown RBP14.5□□□□□ -0.09
GCN1-202ENST00000547263 TEFQ10587 303 aa14.5□□□□□ -0.09
GCN1-202ENST00000547263 MCM10Q7L590 875 aa14.5□□□□□ -0.09
GCN1-202ENST00000547263 RUNDC1Q96C34 613 aa14.5□□□□□ -0.09
GCN1-202ENST00000547263 HEG1Q9ULI3 1381 aa14.49□□□□□ -0.09
GCN1-202ENST00000547263 PTCD1O75127 700 aaKnown RBP14.49□□□□□ -0.09
GCN1-202ENST00000547263 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
GCN1-202ENST00000547263 SRCAPQ6ZRS2 3230 aa14.49□□□□□ -0.09
GCN1-202ENST00000547263 MAPK8IP3Q9UPT6 1336 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 LAMB4A4D0S4 1761 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 RPS6KA4O75676 772 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 ZBTB7AO95365 584 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 NEFMP07197 916 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 CYP19A1P11511 503 aaPredicted RBP14.48□□□□□ -0.09
GCN1-202ENST00000547263 ADRA2BP18089 450 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 DCTN1Q14203 1278 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 INTS5Q6P9B9 1019 aaKnown RBP14.48□□□□□ -0.09
GCN1-202ENST00000547263 DNAJC10Q8IXB1 793 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 RTF1Q92541 710 aaKnown RBP14.48□□□□□ -0.09
GCN1-202ENST00000547263 ZNF496Q96IT1 587 aaPredicted RBP14.48□□□□□ -0.09
GCN1-202ENST00000547263 AK7Q96M32 723 aa14.48□□□□□ -0.09
GCN1-202ENST00000547263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.47□□□□□ -0.09
GCN1-202ENST00000547263 ANP32CO43423 234 aa14.47□□□□□ -0.09
GCN1-202ENST00000547263 CRKLP46109 303 aaKnown RBP14.47□□□□□ -0.09
GCN1-202ENST00000547263 WDR43Q15061 677 aaKnown RBP eCLIP14.47□□□□□ -0.09
GCN1-202ENST00000547263 TAF7Q15545 349 aaPredicted RBP14.47□□□□□ -0.09
GCN1-202ENST00000547263 PNISRQ8TF01 805 aaKnown RBP14.47□□□□□ -0.09
GCN1-202ENST00000547263 BTBD11A6QL63 1104 aa14.46□□□□□ -0.09
GCN1-202ENST00000547263 GNPATO15228 680 aa14.46□□□□□ -0.09
GCN1-202ENST00000547263 KCNQ3O43525 872 aa14.46□□□□□ -0.09
GCN1-202ENST00000547263 TRIM35Q9UPQ4 493 aa14.46□□□□□ -0.09
GCN1-202ENST00000547263 BABAM1Q9NWV8 329 aa14.45□□□□□ -0.1
GCN1-202ENST00000547263 SOS1Q07889 1333 aaPredicted RBP14.44□□□□□ -0.1
GCN1-202ENST00000547263 RIPK4P57078 832 aa14.44□□□□□ -0.1
GCN1-202ENST00000547263 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
GCN1-202ENST00000547263 TTC5Q8N0Z6 440 aa14.44□□□□□ -0.1
GCN1-202ENST00000547263 FMNL2Q96PY5 1086 aa14.44□□□□□ -0.1
GCN1-202ENST00000547263 TEX13AQ9BXU3 409 aaPredicted RBP14.44□□□□□ -0.1
GCN1-202ENST00000547263 CCDC87Q9NVE4 849 aa14.44□□□□□ -0.1
GCN1-202ENST00000547263 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
GCN1-202ENST00000547263 RTCBQ9Y3I0 505 aaKnown RBP14.44□□□□□ -0.1
GCN1-202ENST00000547263 KIF13BQ9NQT8 1826 aa14.43□□□□□ -0.1
GCN1-202ENST00000547263 LMOD3Q0VAK6 560 aa14.43□□□□□ -0.1
GCN1-202ENST00000547263 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
GCN1-202ENST00000547263 CCDC146Q8IYE0 955 aa14.43□□□□□ -0.1
GCN1-202ENST00000547263 THUMPD2Q9BTF0 503 aaKnown RBP14.43□□□□□ -0.1
GCN1-202ENST00000547263 SCN7AQ01118 1682 aa14.42□□□□□ -0.1
GCN1-202ENST00000547263 ARHGEF1Q92888 912 aaKnown RBP14.42□□□□□ -0.1
GCN1-202ENST00000547263 EIF5P55010 431 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms