RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 SLC52A2Q9HAB3 445 aa17.74■□□□□ 0.43
SCARB1-209ENST00000545305 DDB1Q16531 1140 aa17.73■□□□□ 0.43
SCARB1-209ENST00000545305 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
SCARB1-209ENST00000545305 CABP4P57796 275 aa17.72■□□□□ 0.43
SCARB1-209ENST00000545305 FKBP8Q14318 412 aa17.72■□□□□ 0.43
SCARB1-209ENST00000545305 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
SCARB1-209ENST00000545305 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
SCARB1-209ENST00000545305 SMC4Q9NTJ3 1288 aa17.72■□□□□ 0.43
SCARB1-209ENST00000545305 TRPC5Q9UL62 973 aaPredicted RBP17.72■□□□□ 0.43
SCARB1-209ENST00000545305 ATRNO75882 1429 aa17.72■□□□□ 0.43
SCARB1-209ENST00000545305 SOS1Q07889 1333 aaPredicted RBP17.72■□□□□ 0.43
SCARB1-209ENST00000545305 ERVV-2B6SEH9 535 aa17.71■□□□□ 0.43
SCARB1-209ENST00000545305 ELL2O00472 640 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-209ENST00000545305 BCAR3O75815 825 aa17.71■□□□□ 0.43
SCARB1-209ENST00000545305 FAM98CQ17RN3 349 aaKnown RBP17.71■□□□□ 0.43
SCARB1-209ENST00000545305 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
SCARB1-209ENST00000545305 A0A0G2JS52 829 aa17.7■□□□□ 0.42
SCARB1-209ENST00000545305 VAMP4O75379 141 aa17.7■□□□□ 0.42
SCARB1-209ENST00000545305 MYT1Q01538 1121 aa17.7■□□□□ 0.42
SCARB1-209ENST00000545305 IRX6P78412 446 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-209ENST00000545305 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
SCARB1-209ENST00000545305 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
SCARB1-209ENST00000545305 GLI3P10071 1580 aa17.68■□□□□ 0.42
SCARB1-209ENST00000545305 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
SCARB1-209ENST00000545305 NFATC2IPQ8NCF5 419 aa17.68■□□□□ 0.42
SCARB1-209ENST00000545305 SSH1Q8WYL5 1049 aa17.68■□□□□ 0.42
SCARB1-209ENST00000545305 GJD4Q96KN9 370 aaPredicted RBP17.68■□□□□ 0.42
SCARB1-209ENST00000545305 TOGARAM1Q9Y4F4 1720 aa17.68■□□□□ 0.42
SCARB1-209ENST00000545305 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
SCARB1-209ENST00000545305 PLIN1O60240 522 aa17.67■□□□□ 0.42
SCARB1-209ENST00000545305 EIF4A1P60842 406 aaKnown RBP17.67■□□□□ 0.42
SCARB1-209ENST00000545305 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
SCARB1-209ENST00000545305 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
SCARB1-209ENST00000545305 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
SCARB1-209ENST00000545305 HOXB7P09629 217 aa17.66■□□□□ 0.42
SCARB1-209ENST00000545305 TMOD3Q9NYL9 352 aa17.66■□□□□ 0.42
SCARB1-209ENST00000545305 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
SCARB1-209ENST00000545305 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
SCARB1-209ENST00000545305 DOT1LQ8TEK3 1739 aa17.64■□□□□ 0.41
SCARB1-209ENST00000545305 IPO8O15397 1037 aaKnown RBP17.64■□□□□ 0.41
SCARB1-209ENST00000545305 KCNQ3O43525 872 aa17.64■□□□□ 0.41
SCARB1-209ENST00000545305 MS4A1P11836 297 aa17.64■□□□□ 0.41
SCARB1-209ENST00000545305 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.41
SCARB1-209ENST00000545305 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
SCARB1-209ENST00000545305 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
SCARB1-209ENST00000545305 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
SCARB1-209ENST00000545305 PAPPAQ13219 1627 aa17.64■□□□□ 0.41
SCARB1-209ENST00000545305 BRPF1P55201 1214 aaPredicted RBP17.63■□□□□ 0.41
SCARB1-209ENST00000545305 SLC39A6Q13433 755 aa17.63■□□□□ 0.41
SCARB1-209ENST00000545305 CCDC30Q5VVM6 783 aa17.63■□□□□ 0.41
SCARB1-209ENST00000545305 MRPL50Q8N5N7 158 aaKnown RBP17.63■□□□□ 0.41
SCARB1-209ENST00000545305 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
SCARB1-209ENST00000545305 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
SCARB1-209ENST00000545305 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
SCARB1-209ENST00000545305 ITGB4P16144 1822 aa17.62■□□□□ 0.41
SCARB1-209ENST00000545305 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
SCARB1-209ENST00000545305 PDE3AQ14432 1141 aa17.61■□□□□ 0.41
SCARB1-209ENST00000545305 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
SCARB1-209ENST00000545305 NOB1Q9ULX3 412 aaKnown RBP17.6■□□□□ 0.41
SCARB1-209ENST00000545305 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
SCARB1-209ENST00000545305 UBR2Q8IWV8 1755 aa17.6■□□□□ 0.41
SCARB1-209ENST00000545305 BCL9O00512 1426 aa17.59■□□□□ 0.41
SCARB1-209ENST00000545305 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-209ENST00000545305 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-209ENST00000545305 SNRPA1P09661 255 aaKnown RBP17.58■□□□□ 0.4
SCARB1-209ENST00000545305 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
SCARB1-209ENST00000545305 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.4
SCARB1-209ENST00000545305 PIGBQ92521 554 aa17.58■□□□□ 0.4
SCARB1-209ENST00000545305 ARHGAP45Q92619 1136 aa17.58■□□□□ 0.4
SCARB1-209ENST00000545305 ZNF496Q96IT1 587 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-209ENST00000545305 C5P01031 1676 aa17.58■□□□□ 0.4
SCARB1-209ENST00000545305 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
SCARB1-209ENST00000545305 CACNA1FO60840 1977 aa17.57■□□□□ 0.4
SCARB1-209ENST00000545305 ONECUT3O60422 494 aaPredicted RBP17.57■□□□□ 0.4
SCARB1-209ENST00000545305 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
SCARB1-209ENST00000545305 C20orf194Q5TEA3 1177 aa17.57■□□□□ 0.4
SCARB1-209ENST00000545305 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
SCARB1-209ENST00000545305 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
SCARB1-209ENST00000545305 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
SCARB1-209ENST00000545305 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
SCARB1-209ENST00000545305 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
SCARB1-209ENST00000545305 LAMB4A4D0S4 1761 aa17.57■□□□□ 0.4
SCARB1-209ENST00000545305 PTPRCP08575 1304 aa17.56■□□□□ 0.4
SCARB1-209ENST00000545305 PRIM1P49642 420 aaKnown RBP17.56■□□□□ 0.4
SCARB1-209ENST00000545305 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
SCARB1-209ENST00000545305 TRIM27P14373 513 aa17.55■□□□□ 0.4
SCARB1-209ENST00000545305 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
SCARB1-209ENST00000545305 EXOC6Q8TAG9 804 aa17.55■□□□□ 0.4
SCARB1-209ENST00000545305 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
SCARB1-209ENST00000545305 CLUAP1Q96AJ1 413 aa17.55■□□□□ 0.4
SCARB1-209ENST00000545305 ACSBG1Q96GR2 724 aa17.55■□□□□ 0.4
SCARB1-209ENST00000545305 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
SCARB1-209ENST00000545305 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
SCARB1-209ENST00000545305 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-209ENST00000545305 PTCD1O75127 700 aaKnown RBP17.53■□□□□ 0.4
SCARB1-209ENST00000545305 CHPF2Q9P2E5 772 aa17.53■□□□□ 0.4
SCARB1-209ENST00000545305 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
SCARB1-209ENST00000545305 PRAMEF22A3QJZ6 481 aa17.52■□□□□ 0.4
SCARB1-209ENST00000545305 TNNQ9UQP3 1299 aa17.52■□□□□ 0.4
SCARB1-209ENST00000545305 COG6Q9Y2V7 657 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms