RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 IL21Q9HBE4 155 aa11.38□□□□□ -0.59
RAP1B-230ENST00000543697 CLTCQ00610 1675 aaKnown RBP11.38□□□□□ -0.59
RAP1B-230ENST00000543697 JCADQ9P266 1359 aa11.38□□□□□ -0.59
RAP1B-230ENST00000543697 DEPDC5O75140 1603 aa11.38□□□□□ -0.59
RAP1B-230ENST00000543697 CAMSAP2Q08AD1 1489 aa11.38□□□□□ -0.59
RAP1B-230ENST00000543697 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
RAP1B-230ENST00000543697 KCNH2Q12809 1159 aa11.37□□□□□ -0.59
RAP1B-230ENST00000543697 PDXDC2PQ6P474 469 aa11.37□□□□□ -0.59
RAP1B-230ENST00000543697 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
RAP1B-230ENST00000543697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.37□□□□□ -0.596e-8■□□□□ 11.2
RAP1B-230ENST00000543697 MLH3Q9UHC1 1453 aa11.37□□□□□ -0.59
RAP1B-230ENST00000543697 IQGAP1P46940 1657 aa11.36□□□□□ -0.59
RAP1B-230ENST00000543697 PTK2Q05397 1052 aa11.36□□□□□ -0.59
RAP1B-230ENST00000543697 TRAIPQ9BWF2 469 aa11.36□□□□□ -0.59
RAP1B-230ENST00000543697 PPP1R12CQ9BZL4 782 aa11.36□□□□□ -0.59
RAP1B-230ENST00000543697 CTHP32929 405 aa11.35□□□□□ -0.59
RAP1B-230ENST00000543697 ADAMTS19Q8TE59 1207 aa11.35□□□□□ -0.59
RAP1B-230ENST00000543697 MIA2Q96PC5 1412 aa11.35□□□□□ -0.59
RAP1B-230ENST00000543697 COPS2P61201 443 aa11.34□□□□□ -0.59
RAP1B-230ENST00000543697 FAM50AQ14320 339 aaKnown RBP11.34□□□□□ -0.59
RAP1B-230ENST00000543697 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
RAP1B-230ENST00000543697 KCTD17Q8N5Z5 321 aa11.34□□□□□ -0.59
RAP1B-230ENST00000543697 FAM160A2Q8N612 972 aaPredicted RBP11.34□□□□□ -0.59
RAP1B-230ENST00000543697 MTRQ99707 1265 aa11.34□□□□□ -0.59
RAP1B-230ENST00000543697 PHLPP1O60346 1717 aa11.34□□□□□ -0.59
RAP1B-230ENST00000543697 PTPN23Q9H3S7 1636 aa11.34□□□□□ -0.59
RAP1B-230ENST00000543697 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
RAP1B-230ENST00000543697 KIAA1107Q9UPP5 1409 aa11.33□□□□□ -0.6
RAP1B-230ENST00000543697 SPAG9O60271 1321 aaKnown RBP11.33□□□□□ -0.6
RAP1B-230ENST00000543697 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
RAP1B-230ENST00000543697 FBXO45P0C2W1 286 aa11.32□□□□□ -0.6
RAP1B-230ENST00000543697 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
RAP1B-230ENST00000543697 COL16A1Q07092 1604 aaPredicted RBP11.31□□□□□ -0.6
RAP1B-230ENST00000543697 KIDINS220Q9ULH0 1771 aa11.31□□□□□ -0.6
RAP1B-230ENST00000543697 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
RAP1B-230ENST00000543697 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
RAP1B-230ENST00000543697 SLC6A16Q9GZN6 736 aa11.31□□□□□ -0.6
RAP1B-230ENST00000543697 USTQ9Y2C2 406 aa11.31□□□□□ -0.6
RAP1B-230ENST00000543697 CCDC141Q6ZP82 1450 aa11.31□□□□□ -0.6
RAP1B-230ENST00000543697 ATAD2Q6PL18 1390 aa11.3□□□□□ -0.6
RAP1B-230ENST00000543697 SENP3-EIF4A1A0A087X0R7 540 aa11.3□□□□□ -0.6
RAP1B-230ENST00000543697 ZBTB7CA1YPR0 619 aa11.3□□□□□ -0.6
RAP1B-230ENST00000543697 PALM3A6NDB9 673 aaPredicted RBP11.3□□□□□ -0.6
RAP1B-230ENST00000543697 LZTS3O60299 673 aaPredicted RBP11.3□□□□□ -0.6
RAP1B-230ENST00000543697 MEX3CQ5U5Q3 659 aaKnown RBP11.3□□□□□ -0.6
RAP1B-230ENST00000543697 SPATA31A6Q5VVP1 1343 aa11.3□□□□□ -0.6
RAP1B-230ENST00000543697 TJAP1Q5JTD0 557 aa11.29□□□□□ -0.6
RAP1B-230ENST00000543697 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
RAP1B-230ENST00000543697 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
RAP1B-230ENST00000543697 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
RAP1B-230ENST00000543697 ZC3H13Q5T200 1668 aaKnown RBP11.29□□□□□ -0.6
RAP1B-230ENST00000543697 ATP7AQ04656 1500 aa11.29□□□□□ -0.6
RAP1B-230ENST00000543697 ARHGEF5Q12774 1597 aa11.28□□□□□ -0.6
RAP1B-230ENST00000543697 NHSL1Q5SYE7 1610 aa11.28□□□□□ -0.6
RAP1B-230ENST00000543697 ATP9BO43861 1147 aa11.28□□□□□ -0.6
RAP1B-230ENST00000543697 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
RAP1B-230ENST00000543697 ITGAEP38570 1179 aa11.27□□□□□ -0.61
RAP1B-230ENST00000543697 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.61
RAP1B-230ENST00000543697 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
RAP1B-230ENST00000543697 MAFBQ9Y5Q3 323 aaPredicted RBP11.26□□□□□ -0.61
RAP1B-230ENST00000543697 KDM5DQ9BY66 1539 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 CROCC2H7BZ55 1655 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 SHPRHQ149N8 1683 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 CSB-PGBD3P0DP91 1061 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 RBM6P78332 1123 aaKnown RBP11.25□□□□□ -0.61
RAP1B-230ENST00000543697 UCN2Q96RP3 112 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
RAP1B-230ENST00000543697 CHIC2Q9UKJ5 165 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 AFF2P51816 1311 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 DAPK1P53355 1430 aa11.25□□□□□ -0.61
RAP1B-230ENST00000543697 ADGBQ8N7X0 1667 aa11.24□□□□□ -0.61
RAP1B-230ENST00000543697 PTPN5P54829 565 aa11.24□□□□□ -0.61
RAP1B-230ENST00000543697 PLEKHM2Q8IWE5 1019 aa11.24□□□□□ -0.61
RAP1B-230ENST00000543697 RETREG2Q8NC44 543 aa11.24□□□□□ -0.61
RAP1B-230ENST00000543697 CDV3Q9UKY7 258 aaKnown RBP11.24□□□□□ -0.61
RAP1B-230ENST00000543697 RTEL1-TNFRSF6BF6WH68 1400 aa11.24□□□□□ -0.61
RAP1B-230ENST00000543697 POTEMA6NI47 508 aa11.23□□□□□ -0.61
RAP1B-230ENST00000543697 TLL1O43897 1013 aa11.23□□□□□ -0.61
RAP1B-230ENST00000543697 ATG7O95352 703 aa11.23□□□□□ -0.61
RAP1B-230ENST00000543697 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
RAP1B-230ENST00000543697 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
RAP1B-230ENST00000543697 BPHLQ86WA6 291 aaPredicted RBP11.23□□□□□ -0.61
RAP1B-230ENST00000543697 ARHGAP9Q9BRR9 750 aa11.23□□□□□ -0.61
RAP1B-230ENST00000543697 PRDM9Q9NQV7 894 aa11.23□□□□□ -0.61
RAP1B-230ENST00000543697 HCSTQ9UBK5 93 aa11.23□□□□□ -0.61
RAP1B-230ENST00000543697 ABCC5O15440 1437 aa11.22□□□□□ -0.61
RAP1B-230ENST00000543697 A2MP01023 1474 aa11.22□□□□□ -0.61
RAP1B-230ENST00000543697 GGCXP38435 758 aa11.22□□□□□ -0.61
RAP1B-230ENST00000543697 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
RAP1B-230ENST00000543697 SLFNL1Q499Z3 407 aa11.22□□□□□ -0.61
RAP1B-230ENST00000543697 SH3BP5LQ7L8J4 393 aa11.22□□□□□ -0.61
RAP1B-230ENST00000543697 ZBTB33Q86T24 672 aa11.22□□□□□ -0.61
RAP1B-230ENST00000543697 THEMISQ8N1K5 641 aaPredicted RBP11.22□□□□□ -0.61
RAP1B-230ENST00000543697 TNRQ92752 1358 aa11.22□□□□□ -0.61
RAP1B-230ENST00000543697 MAST1Q9Y2H9 1570 aa11.22□□□□□ -0.61
RAP1B-230ENST00000543697 MAP7D1Q3KQU3 841 aa11.21□□□□□ -0.61
RAP1B-230ENST00000543697 QTRT2Q9H974 415 aaKnown RBP11.21□□□□□ -0.61
RAP1B-230ENST00000543697 UGGT1Q9NYU2 1555 aa11.2□□□□□ -0.62
RAP1B-230ENST00000543697 BCL9LQ86UU0 1499 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms