RNA–Protein interactions for RNA: ENST00000543178.5

CELF1-221, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-221ENST00000543178 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
CELF1-221ENST00000543178 LRRC4BQ9NT99 713 aa12.59□□□□□ -0.39
CELF1-221ENST00000543178 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
CELF1-221ENST00000543178 C5P01031 1676 aa12.58□□□□□ -0.4
CELF1-221ENST00000543178 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
CELF1-221ENST00000543178 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
CELF1-221ENST00000543178 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
CELF1-221ENST00000543178 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
CELF1-221ENST00000543178 SLC15A2Q16348 729 aa12.57□□□□□ -0.4
CELF1-221ENST00000543178 CCNL1Q9UK58 526 aaPredicted RBP12.57□□□□□ -0.4
CELF1-221ENST00000543178 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
CELF1-221ENST00000543178 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
CELF1-221ENST00000543178 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
CELF1-221ENST00000543178 SIK1P57059 783 aa12.56□□□□□ -0.4
CELF1-221ENST00000543178 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
CELF1-221ENST00000543178 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
CELF1-221ENST00000543178 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
CELF1-221ENST00000543178 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
CELF1-221ENST00000543178 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
CELF1-221ENST00000543178 COL5A3P25940 1745 aaPredicted RBP12.55□□□□□ -0.4
CELF1-221ENST00000543178 TEFQ10587 303 aa12.55□□□□□ -0.4
CELF1-221ENST00000543178 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
CELF1-221ENST00000543178 CCDC184Q52MB2 194 aa12.55□□□□□ -0.4
CELF1-221ENST00000543178 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
CELF1-221ENST00000543178 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
CELF1-221ENST00000543178 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
CELF1-221ENST00000543178 TUBGCP6Q96RT7 1819 aa12.54□□□□□ -0.4
CELF1-221ENST00000543178 KCPQ6ZWJ8 1503 aa12.53□□□□□ -0.4
CELF1-221ENST00000543178 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
CELF1-221ENST00000543178 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
CELF1-221ENST00000543178 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
CELF1-221ENST00000543178 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
CELF1-221ENST00000543178 MRS2Q9HD23 443 aa12.53□□□□□ -0.4
CELF1-221ENST00000543178 TJP1Q07157 1748 aa12.52□□□□□ -0.41
CELF1-221ENST00000543178 PSDA5PKW4 1024 aaPredicted RBP12.52□□□□□ -0.41
CELF1-221ENST00000543178 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
CELF1-221ENST00000543178 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
CELF1-221ENST00000543178 ITPK1Q13572 414 aa12.52□□□□□ -0.41
CELF1-221ENST00000543178 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
CELF1-221ENST00000543178 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
CELF1-221ENST00000543178 RC3H1Q5TC82 1133 aaKnown RBP12.52□□□□□ -0.41
CELF1-221ENST00000543178 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.41
CELF1-221ENST00000543178 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
CELF1-221ENST00000543178 KCNQ4P56696 695 aa12.51□□□□□ -0.41
CELF1-221ENST00000543178 RIPK4P57078 832 aa12.51□□□□□ -0.41
CELF1-221ENST00000543178 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
CELF1-221ENST00000543178 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
CELF1-221ENST00000543178 MCM10Q7L590 875 aa12.51□□□□□ -0.41
CELF1-221ENST00000543178 LRP5O75197 1615 aa12.51□□□□□ -0.41
CELF1-221ENST00000543178 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
CELF1-221ENST00000543178 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 CCDC146Q8IYE0 955 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 TTC5Q8N0Z6 440 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 LINC00116Q8NCU8 138 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
CELF1-221ENST00000543178 BABAM1Q9NWV8 329 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 CNTNAP4Q9C0A0 1308 aa12.5□□□□□ -0.41
CELF1-221ENST00000543178 PTCD1O75127 700 aaKnown RBP12.49□□□□□ -0.41
CELF1-221ENST00000543178 SLC39A6Q13433 755 aa12.49□□□□□ -0.41
CELF1-221ENST00000543178 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
CELF1-221ENST00000543178 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
CELF1-221ENST00000543178 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
CELF1-221ENST00000543178 CCER2I3L3R5 266 aa12.48□□□□□ -0.41
CELF1-221ENST00000543178 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
CELF1-221ENST00000543178 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
CELF1-221ENST00000543178 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
CELF1-221ENST00000543178 APAF1O14727 1248 aa12.47□□□□□ -0.41
CELF1-221ENST00000543178 SSFA2P28290 1259 aa12.47□□□□□ -0.41
CELF1-221ENST00000543178 ZNF496Q96IT1 587 aaPredicted RBP12.47□□□□□ -0.41
CELF1-221ENST00000543178 AK7Q96M32 723 aa12.47□□□□□ -0.41
CELF1-221ENST00000543178 CYP19A1P11511 503 aaPredicted RBP12.46□□□□□ -0.41
CELF1-221ENST00000543178 ADRA2BP18089 450 aa12.46□□□□□ -0.41
CELF1-221ENST00000543178 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
CELF1-221ENST00000543178 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.41
CELF1-221ENST00000543178 PDGFDQ9GZP0 370 aaPredicted RBP12.46□□□□□ -0.41
CELF1-221ENST00000543178 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
CELF1-221ENST00000543178 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
CELF1-221ENST00000543178 DNAJC10Q8IXB1 793 aa12.45□□□□□ -0.42
CELF1-221ENST00000543178 MTFR1LQ9H019 292 aa12.45□□□□□ -0.42
CELF1-221ENST00000543178 SPON1Q9HCB6 807 aa12.45□□□□□ -0.42
CELF1-221ENST00000543178 RRP7AQ9Y3A4 280 aaKnown RBP12.45□□□□□ -0.42
CELF1-221ENST00000543178 GNPATO15228 680 aa12.44□□□□□ -0.42
CELF1-221ENST00000543178 KCNQ3O43525 872 aa12.44□□□□□ -0.42
CELF1-221ENST00000543178 STARD3NLO95772 234 aa12.44□□□□□ -0.42
CELF1-221ENST00000543178 CRKLP46109 303 aaKnown RBP12.44□□□□□ -0.42
CELF1-221ENST00000543178 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
CELF1-221ENST00000543178 INTS5Q6P9B9 1019 aaKnown RBP12.44□□□□□ -0.42
CELF1-221ENST00000543178 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
CELF1-221ENST00000543178 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
CELF1-221ENST00000543178 RTCBQ9Y3I0 505 aaKnown RBP12.44□□□□□ -0.42
CELF1-221ENST00000543178 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
CELF1-221ENST00000543178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.43□□□□□ -0.42
CELF1-221ENST00000543178 CHL1O00533 1208 aa12.43□□□□□ -0.42
CELF1-221ENST00000543178 SNRPA1P09661 255 aaKnown RBP12.43□□□□□ -0.42
CELF1-221ENST00000543178 CALD1Q05682 793 aaKnown RBP12.43□□□□□ -0.42
CELF1-221ENST00000543178 AMIGO3Q86WK7 504 aa12.43□□□□□ -0.42
CELF1-221ENST00000543178 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms