RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 MCM5P33992 734 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 ESCO1Q5FWF5 840 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 FERMT3Q86UX7 667 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 THEMISQ8N1K5 641 aaPredicted RBP9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 DNAJC2Q99543 621 aaKnown RBP9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 CEBPZQ03701 1054 aaKnown RBP9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 LRSAM1Q6UWE0 723 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 HOMER1Q86YM7 354 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 PDCL3Q9H2J4 239 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 PPP6R1Q9UPN7 881 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 SAMD9LQ8IVG5 1584 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 ACEP12821 1306 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 APPP05067 770 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 PRPF40BQ6NWY9 871 aaKnown RBP9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 ZGPATQ8N5A5 531 aaKnown RBP9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 LARP6Q9BRS8 491 aaKnown RBP9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 NAT10Q9H0A0 1025 aaKnown RBP9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 USP25Q9UHP3 1055 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 EIF4A2Q14240 407 aaKnown RBP9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 TPD52L1Q16890 204 aaPredicted RBP9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 ESYT1Q9BSJ8 1104 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 NUP62CLQ9H1M0 184 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 NPHP1O15259 732 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 ANAPC15P60006 121 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 PPP1R42Q7Z4L9 355 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 RALYLQ86SE5 291 aaKnown RBP9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 SPG7Q9UQ90 795 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 ATP10AO60312 1499 aa9.76□□□□□ -0.85
PRKAB1-207ENST00000542698 PRDM15P57071 1507 aaPredicted RBP9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 TRIM29Q14134 588 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 WASHC4Q2M389 1173 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 DDX54Q8TDD1 881 aaKnown RBP9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 SH2B1Q9NRF2 756 aaPredicted RBP9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 STX6O43752 255 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 ERVK-7P63135 1459 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 PREX2Q70Z35 1606 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 GLI2P10070 1586 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 ATP8B2P98198 1209 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 MAP3K11Q16584 847 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 ZNF771Q7L3S4 317 aaPredicted RBP9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 CREBRFQ8IUR6 639 aa9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 CFAP65Q6ZU64 1925 aaKnown RBP9.75□□□□□ -0.85
PRKAB1-207ENST00000542698 ZFYVE9O95405 1425 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 IL13P35225 146 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 BCL11BQ9C0K0 894 aaPredicted RBP9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 KRT32Q14532 448 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 OTUD7AQ8TE49 926 aaPredicted RBP9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 CFAP45Q9UL16 551 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 USP19O94966 1318 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 CDC42BPBQ9Y5S2 1711 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 RHPN1Q8TCX5 695 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 FMNL2Q96PY5 1086 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 AMOTL2Q9Y2J4 779 aa9.74□□□□□ -0.85
PRKAB1-207ENST00000542698 PI4KAP2A4QPH2 592 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 PI4KAP1Q8N8J0 262 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 ZNF396Q96N95 335 aaPredicted RBP9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 PLEKHF1Q96S99 279 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 SCAND2PQ9GZW5 306 aaPredicted RBP9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 BOLA2Q9H3K6 86 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 ECHDC1Q9NTX5 307 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 MYL6BP14649 208 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 UBE2HP62256 183 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 CAMK4Q16566 473 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 CCAR2Q8N163 923 aaKnown RBP9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 USHBP1Q8N6Y0 703 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 ATP7AQ04656 1500 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 PPIP5K1Q6PFW1 1433 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 ME1P48163 572 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 HS1BP3Q53T59 392 aa9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 YTHDC2Q9H6S0 1430 aaKnown RBP9.73□□□□□ -0.85
PRKAB1-207ENST00000542698 HCLS1P14317 486 aaPredicted RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 AKAP17AQ02040 695 aaKnown RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 UBE2Q2Q8WVN8 375 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 DBF4Q9UBU7 674 aaPredicted RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 ZKSCAN5Q9Y2L8 839 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 ADCY5O95622 1261 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 UVSSAQ2YD98 709 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 SYNMO15061 1565 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 NCKAP5LQ9HCH0 1330 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 NPATQ14207 1427 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 CHL1O00533 1208 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 DHX16O60231 1041 aaKnown RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 INTS4Q96HW7 963 aaKnown RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 PKNOX2Q96KN3 472 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 CCDC8Q9H0W5 538 aaPredicted RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 HOOK1Q9UJC3 728 aaKnown RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 KDM5AP29375 1690 aaKnown RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 STK38Q15208 465 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 MTHFSDQ2M296 383 aaKnown RBP9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 NFXL1Q6ZNB6 911 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 CCDC112Q8NEF3 446 aa9.72□□□□□ -0.85
PRKAB1-207ENST00000542698 TTC37Q6PGP7 1564 aa9.71□□□□□ -0.85
PRKAB1-207ENST00000542698 GJB2P29033 226 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms