RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CABP4P57796 275 aa25.68■■□□□ 1.7
DDX55-207ENST00000540763 SMARCC1Q92922 1105 aaPredicted RBP25.68■■□□□ 1.7
DDX55-207ENST00000540763 SLC52A2Q9HAB3 445 aa25.68■■□□□ 1.7
DDX55-207ENST00000540763 CICQ96RK0 1608 aaPredicted RBP25.67■■□□□ 1.7
DDX55-207ENST00000540763 RTF1Q92541 710 aaKnown RBP25.67■■□□□ 1.7
DDX55-207ENST00000540763 LGR6Q9HBX8 967 aa25.67■■□□□ 1.7
DDX55-207ENST00000540763 TAF1LQ8IZX4 1826 aa25.67■■□□□ 1.7
DDX55-207ENST00000540763 UBR2Q8IWV8 1755 aa25.67■■□□□ 1.7
DDX55-207ENST00000540763 PALLDQ8WX93 1383 aa25.66■■□□□ 1.7
DDX55-207ENST00000540763 IL17REQ8NFR9 667 aa25.65■■□□□ 1.7
DDX55-207ENST00000540763 TMPOP42166 694 aaKnown RBP25.64■■□□□ 1.7
DDX55-207ENST00000540763 SLC27A3Q5K4L6 730 aa25.64■■□□□ 1.7
DDX55-207ENST00000540763 CCDC146Q8IYE0 955 aa25.64■■□□□ 1.7
DDX55-207ENST00000540763 C5P01031 1676 aa25.64■■□□□ 1.69
DDX55-207ENST00000540763 LMOD3Q0VAK6 560 aa25.63■■□□□ 1.69
DDX55-207ENST00000540763 TXNRD1Q16881 649 aa25.63■■□□□ 1.69
DDX55-207ENST00000540763 NFATC2IPQ8NCF5 419 aa25.63■■□□□ 1.69
DDX55-207ENST00000540763 HMGB2P26583 209 aaKnown RBP25.62■■□□□ 1.69
DDX55-207ENST00000540763 TEFQ10587 303 aa25.62■■□□□ 1.69
DDX55-207ENST00000540763 PROM2Q8N271 834 aa25.61■■□□□ 1.69
DDX55-207ENST00000540763 ATG3Q9NT62 314 aa25.6■■□□□ 1.69
DDX55-207ENST00000540763 KDM3BQ7LBC6 1761 aa25.59■■□□□ 1.69
DDX55-207ENST00000540763 RIPK4P57078 832 aa25.59■■□□□ 1.69
DDX55-207ENST00000540763 ASAP1Q9ULH1 1129 aa25.59■■□□□ 1.69
DDX55-207ENST00000540763 QSER1Q2KHR3 1735 aa25.59■■□□□ 1.69
DDX55-207ENST00000540763 COL5A3P25940 1745 aaPredicted RBP25.58■■□□□ 1.69
DDX55-207ENST00000540763 NBPF14Q5TI25 921 aa25.58■■□□□ 1.69
DDX55-207ENST00000540763 MCM10Q7L590 875 aa25.58■■□□□ 1.69
DDX55-207ENST00000540763 KCPQ6ZWJ8 1503 aa25.57■■□□□ 1.68
DDX55-207ENST00000540763 NCBP3Q53F19 620 aaKnown RBP25.56■■□□□ 1.68
DDX55-207ENST00000540763 CCNL1Q9UK58 526 aaPredicted RBP25.56■■□□□ 1.68
DDX55-207ENST00000540763 TJP1Q07157 1748 aa25.56■■□□□ 1.68
DDX55-207ENST00000540763 LOC102724428A0A0B4J2F2 783 aa25.54■■□□□ 1.68
DDX55-207ENST00000540763 APAF1O14727 1248 aa25.54■■□□□ 1.68
DDX55-207ENST00000540763 SIK1P57059 783 aa25.54■■□□□ 1.68
DDX55-207ENST00000540763 DCTN1Q14203 1278 aa25.54■■□□□ 1.68
DDX55-207ENST00000540763 MIER1Q8N108 512 aa25.54■■□□□ 1.68
DDX55-207ENST00000540763 LRRC4BQ9NT99 713 aa25.54■■□□□ 1.68
DDX55-207ENST00000540763 C4BP0C0L5 1744 aa25.54■■□□□ 1.68
DDX55-207ENST00000540763 FAM9BQ8IZU0 186 aa25.53■■□□□ 1.68
DDX55-207ENST00000540763 TUBGCP6Q96RT7 1819 aa25.52■■□□□ 1.68
DDX55-207ENST00000540763 TRIM35Q9UPQ4 493 aa25.52■■□□□ 1.68
DDX55-207ENST00000540763 RRP7AQ9Y3A4 280 aaKnown RBP25.52■■□□□ 1.68
DDX55-207ENST00000540763 TAF7Q15545 349 aaPredicted RBP25.51■■□□□ 1.67
DDX55-207ENST00000540763 BTBD11A6QL63 1104 aa25.5■■□□□ 1.67
DDX55-207ENST00000540763 NEUROD2Q15784 382 aa25.5■■□□□ 1.67
DDX55-207ENST00000540763 ZNF790Q6PG37 636 aa25.5■■□□□ 1.67
DDX55-207ENST00000540763 TTC5Q8N0Z6 440 aa25.5■■□□□ 1.67
DDX55-207ENST00000540763 CCDC27Q2M243 656 aa25.49■■□□□ 1.67
DDX55-207ENST00000540763 NGEFQ8N5V2 710 aa25.49■■□□□ 1.67
DDX55-207ENST00000540763 BABAM1Q9NWV8 329 aa25.49■■□□□ 1.67
DDX55-207ENST00000540763 SLC39A6Q13433 755 aa25.48■■□□□ 1.67
DDX55-207ENST00000540763 VSIG10Q8N0Z9 540 aa25.48■■□□□ 1.67
DDX55-207ENST00000540763 UBR3Q6ZT12 1888 aa25.48■■□□□ 1.67
DDX55-207ENST00000540763 LAMB4A4D0S4 1761 aa25.47■■□□□ 1.67
DDX55-207ENST00000540763 ATP6V1AP38606 617 aa25.47■■□□□ 1.67
DDX55-207ENST00000540763 RBM42Q9BTD8 480 aaKnown RBP25.47■■□□□ 1.67
DDX55-207ENST00000540763 THUMPD2Q9BTF0 503 aaKnown RBP25.47■■□□□ 1.67
DDX55-207ENST00000540763 SLC4A9Q96Q91 983 aa25.46■■□□□ 1.67
DDX55-207ENST00000540763 ANO8Q9HCE9 1232 aaPredicted RBP25.46■■□□□ 1.67
DDX55-207ENST00000540763 STK32BQ9NY57 414 aa25.46■■□□□ 1.67
DDX55-207ENST00000540763 PTCD1O75127 700 aaKnown RBP25.45■■□□□ 1.66
DDX55-207ENST00000540763 CALD1Q05682 793 aaKnown RBP25.45■■□□□ 1.66
DDX55-207ENST00000540763 CASZ1Q86V15 1759 aa25.45■■□□□ 1.66
DDX55-207ENST00000540763 HEG1Q9ULI3 1381 aa25.44■■□□□ 1.66
DDX55-207ENST00000540763 KCNQ4P56696 695 aa25.44■■□□□ 1.66
DDX55-207ENST00000540763 SLC15A2Q16348 729 aa25.44■■□□□ 1.66
DDX55-207ENST00000540763 AKT1S1Q96B36 256 aa25.44■■□□□ 1.66
DDX55-207ENST00000540763 SPON1Q9HCB6 807 aa25.44■■□□□ 1.66
DDX55-207ENST00000540763 MYH14Q7Z406 1995 aaKnown RBP25.44■■□□□ 1.66
DDX55-207ENST00000540763 ITPK1Q13572 414 aa25.43■■□□□ 1.66
DDX55-207ENST00000540763 FMNL2Q96PY5 1086 aa25.43■■□□□ 1.66
DDX55-207ENST00000540763 CNTNAP4Q9C0A0 1308 aa25.41■■□□□ 1.66
DDX55-207ENST00000540763 ZNF827Q17R98 1081 aa25.41■■□□□ 1.66
DDX55-207ENST00000540763 LINC00116Q8NCU8 138 aa25.41■■□□□ 1.66
DDX55-207ENST00000540763 ZNF496Q96IT1 587 aaPredicted RBP25.41■■□□□ 1.66
DDX55-207ENST00000540763 PPP1R1BQ9UD71 204 aaPredicted RBP25.41■■□□□ 1.66
DDX55-207ENST00000540763 RC3H1Q5TC82 1133 aaKnown RBP25.39■■□□□ 1.66
DDX55-207ENST00000540763 WWC1Q8IX03 1113 aa25.39■■□□□ 1.66
DDX55-207ENST00000540763 CFAP44Q96MT7 982 aa25.39■■□□□ 1.66
DDX55-207ENST00000540763 TEX13AQ9BXU3 409 aaPredicted RBP25.39■■□□□ 1.66
DDX55-207ENST00000540763 CHL1O00533 1208 aa25.38■■□□□ 1.65
DDX55-207ENST00000540763 KCNQ3O43525 872 aa25.38■■□□□ 1.65
DDX55-207ENST00000540763 TSPYL4Q9UJ04 414 aa25.38■■□□□ 1.65
DDX55-207ENST00000540763 AK7Q96M32 723 aa25.37■■□□□ 1.65
DDX55-207ENST00000540763 IFT57Q9NWB7 429 aa25.37■■□□□ 1.65
DDX55-207ENST00000540763 IL16Q14005 1332 aa25.37■■□□□ 1.65
DDX55-207ENST00000540763 DNAJC10Q8IXB1 793 aa25.36■■□□□ 1.65
DDX55-207ENST00000540763 MIS18AQ9NYP9 233 aa25.36■■□□□ 1.65
DDX55-207ENST00000540763 ZNF853P0CG23 659 aa25.35■■□□□ 1.65
DDX55-207ENST00000540763 EIF4A1P60842 406 aaKnown RBP25.35■■□□□ 1.65
DDX55-207ENST00000540763 GNAI1P63096 354 aa25.35■■□□□ 1.65
DDX55-207ENST00000540763 TFCP2L1Q9NZI6 479 aa25.35■■□□□ 1.65
DDX55-207ENST00000540763 C4AP0C0L4 1744 aa25.34■■□□□ 1.65
DDX55-207ENST00000540763 SNRPA1P09661 255 aaKnown RBP25.34■■□□□ 1.65
DDX55-207ENST00000540763 CYP19A1P11511 503 aaPredicted RBP25.34■■□□□ 1.65
DDX55-207ENST00000540763 FLAD1Q8NFF5 587 aa25.34■■□□□ 1.65
DDX55-207ENST00000540763 COL24A1Q17RW2 1714 aa25.34■■□□□ 1.65
DDX55-207ENST00000540763 STARD3NLO95772 234 aa25.33■■□□□ 1.65
DDX55-207ENST00000540763 SSFA2P28290 1259 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms