RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 PTCD1O75127 700 aaKnown RBP16.53■□□□□ 0.24
CYB561A3-213ENST00000539890 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
CYB561A3-213ENST00000539890 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
CYB561A3-213ENST00000539890 CCDC146Q8IYE0 955 aa16.52■□□□□ 0.24
CYB561A3-213ENST00000539890 IL17REQ8NFR9 667 aa16.52■□□□□ 0.24
CYB561A3-213ENST00000539890 AK7Q96M32 723 aa16.52■□□□□ 0.24
CYB561A3-213ENST00000539890 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
CYB561A3-213ENST00000539890 MCM10Q7L590 875 aa16.51■□□□□ 0.23
CYB561A3-213ENST00000539890 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
CYB561A3-213ENST00000539890 PLEKHF1Q96S99 279 aa16.51■□□□□ 0.23
CYB561A3-213ENST00000539890 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
CYB561A3-213ENST00000539890 RGPD3A6NKT7 1758 aaPredicted RBP16.51■□□□□ 0.23
CYB561A3-213ENST00000539890 RGPD4Q7Z3J3 1758 aa16.51■□□□□ 0.23
CYB561A3-213ENST00000539890 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
CYB561A3-213ENST00000539890 RIPK4P57078 832 aa16.5■□□□□ 0.23
CYB561A3-213ENST00000539890 LMOD3Q0VAK6 560 aa16.5■□□□□ 0.23
CYB561A3-213ENST00000539890 NEUROD2Q15784 382 aa16.5■□□□□ 0.23
CYB561A3-213ENST00000539890 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
CYB561A3-213ENST00000539890 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
CYB561A3-213ENST00000539890 FLAD1Q8NFF5 587 aa16.48■□□□□ 0.23
CYB561A3-213ENST00000539890 RREB1Q92766 1687 aa16.48■□□□□ 0.23
CYB561A3-213ENST00000539890 ITGB4P16144 1822 aa16.47■□□□□ 0.23
CYB561A3-213ENST00000539890 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
CYB561A3-213ENST00000539890 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
CYB561A3-213ENST00000539890 TOGARAM1Q9Y4F4 1720 aa16.47■□□□□ 0.23
CYB561A3-213ENST00000539890 NUP188Q5SRE5 1749 aa16.46■□□□□ 0.23
CYB561A3-213ENST00000539890 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
CYB561A3-213ENST00000539890 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.23
CYB561A3-213ENST00000539890 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
CYB561A3-213ENST00000539890 SPON1Q9HCB6 807 aa16.46■□□□□ 0.23
CYB561A3-213ENST00000539890 PPP1R1BQ9UD71 204 aaPredicted RBP16.46■□□□□ 0.23
CYB561A3-213ENST00000539890 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
CYB561A3-213ENST00000539890 ZBTB7AO95365 584 aa16.45■□□□□ 0.22
CYB561A3-213ENST00000539890 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
CYB561A3-213ENST00000539890 GNPATO15228 680 aa16.44■□□□□ 0.22
CYB561A3-213ENST00000539890 PHF14O94880 888 aa16.44■□□□□ 0.22
CYB561A3-213ENST00000539890 ITPK1Q13572 414 aa16.44■□□□□ 0.22
CYB561A3-213ENST00000539890 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
CYB561A3-213ENST00000539890 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
CYB561A3-213ENST00000539890 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
CYB561A3-213ENST00000539890 TEX13AQ9BXU3 409 aaPredicted RBP16.44■□□□□ 0.22
CYB561A3-213ENST00000539890 CEMIPQ8WUJ3 1361 aa16.43■□□□□ 0.22
CYB561A3-213ENST00000539890 STARD3NLO95772 234 aa16.43■□□□□ 0.22
CYB561A3-213ENST00000539890 CCDC184Q52MB2 194 aa16.43■□□□□ 0.22
CYB561A3-213ENST00000539890 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
CYB561A3-213ENST00000539890 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
CYB561A3-213ENST00000539890 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
CYB561A3-213ENST00000539890 SCN11AQ9UI33 1791 aa16.42■□□□□ 0.22
CYB561A3-213ENST00000539890 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
CYB561A3-213ENST00000539890 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
CYB561A3-213ENST00000539890 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
CYB561A3-213ENST00000539890 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
CYB561A3-213ENST00000539890 LY75O60449 1722 aa16.42■□□□□ 0.22
CYB561A3-213ENST00000539890 APAF1O14727 1248 aa16.41■□□□□ 0.22
CYB561A3-213ENST00000539890 RC3H1Q5TC82 1133 aaKnown RBP16.41■□□□□ 0.22
CYB561A3-213ENST00000539890 DIEXFQ68CQ4 756 aaKnown RBP16.41■□□□□ 0.22
CYB561A3-213ENST00000539890 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
CYB561A3-213ENST00000539890 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
CYB561A3-213ENST00000539890 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
CYB561A3-213ENST00000539890 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
CYB561A3-213ENST00000539890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
CYB561A3-213ENST00000539890 SSFA2P28290 1259 aa16.4■□□□□ 0.22
CYB561A3-213ENST00000539890 POLD1P28340 1107 aa16.4■□□□□ 0.22
CYB561A3-213ENST00000539890 DNAJC10Q8IXB1 793 aa16.4■□□□□ 0.22
CYB561A3-213ENST00000539890 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
CYB561A3-213ENST00000539890 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
CYB561A3-213ENST00000539890 PDGFDQ9GZP0 370 aaPredicted RBP16.4■□□□□ 0.22
CYB561A3-213ENST00000539890 RFC4P35249 363 aa16.39■□□□□ 0.21
CYB561A3-213ENST00000539890 CRKLP46109 303 aaKnown RBP16.39■□□□□ 0.21
CYB561A3-213ENST00000539890 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
CYB561A3-213ENST00000539890 COL23A1Q86Y22 540 aaPredicted RBP16.39■□□□□ 0.21
CYB561A3-213ENST00000539890 TSPYL4Q9UJ04 414 aa16.39■□□□□ 0.21
CYB561A3-213ENST00000539890 MRC1P22897 1456 aa16.39■□□□□ 0.21
CYB561A3-213ENST00000539890 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
CYB561A3-213ENST00000539890 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
CYB561A3-213ENST00000539890 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
CYB561A3-213ENST00000539890 KCNQ3O43525 872 aa16.37■□□□□ 0.21
CYB561A3-213ENST00000539890 RPS6KA4O75676 772 aa16.37■□□□□ 0.21
CYB561A3-213ENST00000539890 ADRA2BP18089 450 aa16.37■□□□□ 0.21
CYB561A3-213ENST00000539890 ARXQ96QS3 562 aa16.37■□□□□ 0.21
CYB561A3-213ENST00000539890 HEG1Q9ULI3 1381 aa16.37■□□□□ 0.21
CYB561A3-213ENST00000539890 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
CYB561A3-213ENST00000539890 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
CYB561A3-213ENST00000539890 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
CYB561A3-213ENST00000539890 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
CYB561A3-213ENST00000539890 C5P01031 1676 aa16.35■□□□□ 0.21
CYB561A3-213ENST00000539890 ZPR1O75312 459 aa16.35■□□□□ 0.21
CYB561A3-213ENST00000539890 PAPPAQ13219 1627 aa16.34■□□□□ 0.21
CYB561A3-213ENST00000539890 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
CYB561A3-213ENST00000539890 C4BP0C0L5 1744 aa16.34■□□□□ 0.21
CYB561A3-213ENST00000539890 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
CYB561A3-213ENST00000539890 SMIM5Q71RC9 77 aa16.34■□□□□ 0.21
CYB561A3-213ENST00000539890 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
CYB561A3-213ENST00000539890 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
CYB561A3-213ENST00000539890 A0A087WZG4 1122 aa16.33■□□□□ 0.2
CYB561A3-213ENST00000539890 INTS5Q6P9B9 1019 aaKnown RBP16.33■□□□□ 0.2
CYB561A3-213ENST00000539890 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
CYB561A3-213ENST00000539890 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
CYB561A3-213ENST00000539890 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
CYB561A3-213ENST00000539890 CCER2I3L3R5 266 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms