RNA–Protein interactions for RNA: ENST00000539611.1

ARF3-206, Transcript of ADP ribosylation factor 3, humanhuman

TSL 5

Gene ARF3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-206ENST00000539611 LOC102724428A0A0B4J2F2 783 aa28.47■■■□□ 2.15
ARF3-206ENST00000539611 SIK1P57059 783 aa28.47■■■□□ 2.15
ARF3-206ENST00000539611 SLC52A2Q9HAB3 445 aa28.47■■■□□ 2.15
ARF3-206ENST00000539611 GNAT3A8MTJ3 354 aa28.46■■■□□ 2.15
ARF3-206ENST00000539611 C5P01031 1676 aa28.45■■■□□ 2.15
ARF3-206ENST00000539611 PLEKHF1Q96S99 279 aa28.45■■■□□ 2.14
ARF3-206ENST00000539611 IL17REQ8NFR9 667 aa28.44■■■□□ 2.14
ARF3-206ENST00000539611 SLC4A9Q96Q91 983 aa28.44■■■□□ 2.14
ARF3-206ENST00000539611 TAF1LQ8IZX4 1826 aa28.43■■■□□ 2.14
ARF3-206ENST00000539611 ITPK1Q13572 414 aa28.42■■■□□ 2.14
ARF3-206ENST00000539611 VIRMAQ69YN4 1812 aaKnown RBP28.41■■■□□ 2.14
ARF3-206ENST00000539611 QSER1Q2KHR3 1735 aa28.41■■■□□ 2.14
ARF3-206ENST00000539611 HMGB2P26583 209 aaKnown RBP28.41■■■□□ 2.14
ARF3-206ENST00000539611 PNPLA7Q6ZV29 1317 aa28.41■■■□□ 2.14
ARF3-206ENST00000539611 CEMIPQ8WUJ3 1361 aa28.4■■■□□ 2.14
ARF3-206ENST00000539611 ATP6V1AP38606 617 aa28.4■■■□□ 2.14
ARF3-206ENST00000539611 LINC00116Q8NCU8 138 aa28.4■■■□□ 2.14
ARF3-206ENST00000539611 TFCP2L1Q9NZI6 479 aa28.4■■■□□ 2.14
ARF3-206ENST00000539611 ZNF831Q5JPB2 1677 aa28.39■■■□□ 2.14
ARF3-206ENST00000539611 C4BP0C0L5 1744 aa28.39■■■□□ 2.14
ARF3-206ENST00000539611 TUBGCP6Q96RT7 1819 aa28.39■■■□□ 2.13
ARF3-206ENST00000539611 RBM42Q9BTD8 480 aaKnown RBP28.37■■■□□ 2.13
ARF3-206ENST00000539611 ZBTB7AO95365 584 aa28.36■■■□□ 2.13
ARF3-206ENST00000539611 SPON1Q9HCB6 807 aa28.36■■■□□ 2.13
ARF3-206ENST00000539611 PTCD1O75127 700 aaKnown RBP28.35■■■□□ 2.13
ARF3-206ENST00000539611 SLC39A6Q13433 755 aa28.35■■■□□ 2.13
ARF3-206ENST00000539611 PNNQ9H307 717 aaKnown RBP28.35■■■□□ 2.13
ARF3-206ENST00000539611 HTATSF1O43719 755 aaKnown RBP28.34■■■□□ 2.13
ARF3-206ENST00000539611 SIPA1L3O60292 1781 aaPredicted RBP28.33■■■□□ 2.13
ARF3-206ENST00000539611 TEFQ10587 303 aa28.33■■■□□ 2.13
ARF3-206ENST00000539611 AMIGO3Q86WK7 504 aa28.33■■■□□ 2.13
ARF3-206ENST00000539611 MTFR1LQ9H019 292 aa28.33■■■□□ 2.13
ARF3-206ENST00000539611 KCPQ6ZWJ8 1503 aa28.33■■■□□ 2.13
ARF3-206ENST00000539611 NEFMP07197 916 aa28.32■■■□□ 2.12
ARF3-206ENST00000539611 CICQ96RK0 1608 aaPredicted RBP28.32■■■□□ 2.12
ARF3-206ENST00000539611 PTGER2P43116 358 aa28.31■■■□□ 2.12
ARF3-206ENST00000539611 NFE2L2Q16236 605 aa28.31■■■□□ 2.12
ARF3-206ENST00000539611 MCM10Q7L590 875 aa28.31■■■□□ 2.12
ARF3-206ENST00000539611 COL23A1Q86Y22 540 aaPredicted RBP28.31■■■□□ 2.12
ARF3-206ENST00000539611 AK7Q96M32 723 aa28.31■■■□□ 2.12
ARF3-206ENST00000539611 COL5A3P25940 1745 aaPredicted RBP28.3■■■□□ 2.12
ARF3-206ENST00000539611 DCTN1Q14203 1278 aa28.3■■■□□ 2.12
ARF3-206ENST00000539611 SLC16A10Q8TF71 515 aa28.3■■■□□ 2.12
ARF3-206ENST00000539611 RTF1Q92541 710 aaKnown RBP28.3■■■□□ 2.12
ARF3-206ENST00000539611 ATF5Q9Y2D1 282 aaPredicted RBP28.3■■■□□ 2.12
ARF3-206ENST00000539611 MAPK8IP3Q9UPT6 1336 aa28.29■■■□□ 2.12
ARF3-206ENST00000539611 SGIP1Q9BQI5 828 aa28.29■■■□□ 2.12
ARF3-206ENST00000539611 ADAMTS8Q9UP79 889 aa28.29■■■□□ 2.12
ARF3-206ENST00000539611 TJP1Q07157 1748 aa28.29■■■□□ 2.12
ARF3-206ENST00000539611 WDR43Q15061 677 aaKnown RBP eCLIP28.28■■■□□ 2.12
ARF3-206ENST00000539611 UBR3Q6ZT12 1888 aa28.27■■■□□ 2.12
ARF3-206ENST00000539611 UBR2Q8IWV8 1755 aa28.27■■■□□ 2.12
ARF3-206ENST00000539611 CNTNAP4Q9C0A0 1308 aa28.27■■■□□ 2.12
ARF3-206ENST00000539611 CCDC184Q52MB2 194 aa28.27■■■□□ 2.12
ARF3-206ENST00000539611 RC3H1Q5TC82 1133 aaKnown RBP28.27■■■□□ 2.12
ARF3-206ENST00000539611 ZNF790Q6PG37 636 aa28.27■■■□□ 2.12
ARF3-206ENST00000539611 SMIM5Q71RC9 77 aa28.27■■■□□ 2.12
ARF3-206ENST00000539611 FLAD1Q8NFF5 587 aa28.27■■■□□ 2.12
ARF3-206ENST00000539611 ANP32CO43423 234 aa28.26■■■□□ 2.11
ARF3-206ENST00000539611 GNPATO15228 680 aa28.25■■■□□ 2.11
ARF3-206ENST00000539611 SSFA2P28290 1259 aa28.25■■■□□ 2.11
ARF3-206ENST00000539611 DLG5Q8TDM6 1919 aa28.25■■■□□ 2.11
ARF3-206ENST00000539611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.24■■■□□ 2.11
ARF3-206ENST00000539611 DNAJC10Q8IXB1 793 aa28.24■■■□□ 2.11
ARF3-206ENST00000539611 VSIG10Q8N0Z9 540 aa28.24■■■□□ 2.11
ARF3-206ENST00000539611 COL24A1Q17RW2 1714 aa28.23■■■□□ 2.11
ARF3-206ENST00000539611 BTBD11A6QL63 1104 aa28.23■■■□□ 2.11
ARF3-206ENST00000539611 CCDC146Q8IYE0 955 aa28.23■■■□□ 2.11
ARF3-206ENST00000539611 TTC5Q8N0Z6 440 aa28.23■■■□□ 2.11
ARF3-206ENST00000539611 PHF14O94880 888 aa28.22■■■□□ 2.11
ARF3-206ENST00000539611 RUNDC1Q96C34 613 aa28.22■■■□□ 2.11
ARF3-206ENST00000539611 ZNF496Q96IT1 587 aaPredicted RBP28.22■■■□□ 2.11
ARF3-206ENST00000539611 KCNQ3O43525 872 aa28.21■■■□□ 2.11
ARF3-206ENST00000539611 TMPOP42166 694 aaKnown RBP28.21■■■□□ 2.11
ARF3-206ENST00000539611 MSH5O43196 834 aa28.2■■■□□ 2.1
ARF3-206ENST00000539611 CRKLP46109 303 aaKnown RBP28.2■■■□□ 2.1
ARF3-206ENST00000539611 MYH14Q7Z406 1995 aaKnown RBP28.19■■■□□ 2.1
ARF3-206ENST00000539611 RPS6KA4O75676 772 aa28.19■■■□□ 2.1
ARF3-206ENST00000539611 CYP19A1P11511 503 aaPredicted RBP28.19■■■□□ 2.1
ARF3-206ENST00000539611 RIPK4P57078 832 aa28.19■■■□□ 2.1
ARF3-206ENST00000539611 TAF7Q15545 349 aaPredicted RBP28.19■■■□□ 2.1
ARF3-206ENST00000539611 INTS5Q6P9B9 1019 aaKnown RBP28.19■■■□□ 2.1
ARF3-206ENST00000539611 RTCBQ9Y3I0 505 aaKnown RBP28.19■■■□□ 2.1
ARF3-206ENST00000539611 HEG1Q9ULI3 1381 aa28.19■■■□□ 2.1
ARF3-206ENST00000539611 THUMPD2Q9BTF0 503 aaKnown RBP28.18■■■□□ 2.1
ARF3-206ENST00000539611 PPP1R1BQ9UD71 204 aaPredicted RBP28.17■■■□□ 2.1
ARF3-206ENST00000539611 FMNL2Q96PY5 1086 aa28.16■■■□□ 2.1
ARF3-206ENST00000539611 ADRA2BP18089 450 aa28.15■■■□□ 2.1
ARF3-206ENST00000539611 TRAPPC3LQ5T215 181 aa28.15■■■□□ 2.1
ARF3-206ENST00000539611 RRP7AQ9Y3A4 280 aaKnown RBP28.15■■■□□ 2.1
ARF3-206ENST00000539611 ARHGEF1Q92888 912 aaKnown RBP28.14■■■□□ 2.1
ARF3-206ENST00000539611 CCDC87Q9NVE4 849 aa28.14■■■□□ 2.1
ARF3-206ENST00000539611 MSL1Q68DK7 614 aa28.13■■■□□ 2.09
ARF3-206ENST00000539611 PNISRQ8TF01 805 aaKnown RBP28.13■■■□□ 2.09
ARF3-206ENST00000539611 MIS18AQ9NYP9 233 aa28.13■■■□□ 2.09
ARF3-206ENST00000539611 ARXQ96QS3 562 aa28.12■■■□□ 2.09
ARF3-206ENST00000539611 POLD1P28340 1107 aa28.11■■■□□ 2.09
ARF3-206ENST00000539611 LMOD3Q0VAK6 560 aa28.11■■■□□ 2.09
ARF3-206ENST00000539611 TEX13AQ9BXU3 409 aaPredicted RBP28.11■■■□□ 2.09
ARF3-206ENST00000539611 MRS2Q9HD23 443 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms