RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 AMOTQ4VCS5 1084 aa22.22■■□□□ 1.15
GNE-204ENST00000539208 AKAP4Q5JQC9 854 aa22.22■■□□□ 1.15
GNE-204ENST00000539208 KIF2CQ99661 725 aa22.22■■□□□ 1.15
GNE-204ENST00000539208 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
GNE-204ENST00000539208 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
GNE-204ENST00000539208 NCOA3Q9Y6Q9 1424 aa22.21■■□□□ 1.15
GNE-204ENST00000539208 HDGFL1Q5TGJ6 251 aa22.21■■□□□ 1.15
GNE-204ENST00000539208 PROSER2Q86WR7 435 aaPredicted RBP22.21■■□□□ 1.15
GNE-204ENST00000539208 OSBPL3Q9H4L5 887 aa22.21■■□□□ 1.15
GNE-204ENST00000539208 CAMTA1Q9Y6Y1 1673 aa22.2■■□□□ 1.15
GNE-204ENST00000539208 OVOS2A0A0G2JMS6 1433 aa22.2■■□□□ 1.14
GNE-204ENST00000539208 EIF4A1P60842 406 aaKnown RBP22.2■■□□□ 1.14
GNE-204ENST00000539208 CHMP5Q9NZZ3 219 aa22.2■■□□□ 1.14
GNE-204ENST00000539208 C1orf167Q5SNV9 1468 aa22.19■■□□□ 1.14
GNE-204ENST00000539208 C19orf44Q9H6X5 657 aa22.19■■□□□ 1.14
GNE-204ENST00000539208 LGR6Q9HBX8 967 aa22.19■■□□□ 1.14
GNE-204ENST00000539208 ATP8B2P98198 1209 aa22.19■■□□□ 1.14
GNE-204ENST00000539208 SMARCA5O60264 1052 aaPredicted RBP22.18■■□□□ 1.14
GNE-204ENST00000539208 KRT28Q7Z3Y7 464 aa22.18■■□□□ 1.14
GNE-204ENST00000539208 OTUD7AQ8TE49 926 aaPredicted RBP22.18■■□□□ 1.14
GNE-204ENST00000539208 NECTIN2Q92692 538 aa22.18■■□□□ 1.14
GNE-204ENST00000539208 LRRC59Q96AG4 307 aaKnown RBP22.18■■□□□ 1.14
GNE-204ENST00000539208 ZNF530Q6P9A1 599 aaPredicted RBP22.18■■□□□ 1.14
GNE-204ENST00000539208 ZBTB7CA1YPR0 619 aa22.17■■□□□ 1.14
GNE-204ENST00000539208 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
GNE-204ENST00000539208 SDSP20132 328 aa22.16■■□□□ 1.14
GNE-204ENST00000539208 XPCQ01831 940 aaPredicted RBP22.16■■□□□ 1.14
GNE-204ENST00000539208 ANKRD24Q8TF21 1146 aa22.16■■□□□ 1.14
GNE-204ENST00000539208 DDIT3P35638 169 aa22.15■■□□□ 1.14
GNE-204ENST00000539208 TEFQ10587 303 aa22.15■■□□□ 1.14
GNE-204ENST00000539208 CASC1Q6TDU7 716 aa22.15■■□□□ 1.14
GNE-204ENST00000539208 USP44Q9H0E7 712 aa22.15■■□□□ 1.14
GNE-204ENST00000539208 SPRYD3Q8NCJ5 442 aa22.14■■□□□ 1.13
GNE-204ENST00000539208 APBB1O00213 710 aa22.14■■□□□ 1.13
GNE-204ENST00000539208 BTBD11A6QL63 1104 aa22.13■■□□□ 1.13
GNE-204ENST00000539208 RNMTO43148 476 aaKnown RBP22.13■■□□□ 1.13
GNE-204ENST00000539208 PDE1AP54750 535 aa22.13■■□□□ 1.13
GNE-204ENST00000539208 BCL11AQ9H165 835 aa22.13■■□□□ 1.13
GNE-204ENST00000539208 PHAXQ9H814 394 aaKnown RBP22.13■■□□□ 1.13
GNE-204ENST00000539208 ALS2Q96Q42 1657 aa22.13■■□□□ 1.13
GNE-204ENST00000539208 C1orf141Q5JVX7 400 aa22.12■■□□□ 1.13
GNE-204ENST00000539208 SALL3Q9BXA9 1300 aa22.12■■□□□ 1.13
GNE-204ENST00000539208 USP26Q9BXU7 913 aa22.12■■□□□ 1.13
GNE-204ENST00000539208 LRRCC1Q9C099 1032 aa22.12■■□□□ 1.13
GNE-204ENST00000539208 IBTKQ9P2D0 1353 aaPredicted RBP22.12■■□□□ 1.13
GNE-204ENST00000539208 PNMA6EA0A0J9YXQ4 647 aa22.11■■□□□ 1.13
GNE-204ENST00000539208 UBTFL1P0CB47 393 aaPredicted RBP22.11■■□□□ 1.13
GNE-204ENST00000539208 LMOD2Q6P5Q4 547 aa22.11■■□□□ 1.13
GNE-204ENST00000539208 CIZ1Q9ULV3 898 aaPredicted RBP22.11■■□□□ 1.13
GNE-204ENST00000539208 LRRFIP2Q9Y608 721 aaKnown RBP22.11■■□□□ 1.13
GNE-204ENST00000539208 PXDNQ92626 1479 aa22.11■■□□□ 1.13
GNE-204ENST00000539208 MPRIPQ6WCQ1 1025 aa22.11■■□□□ 1.13
GNE-204ENST00000539208 SRCIN1Q9C0H9 1055 aa22.11■■□□□ 1.13
GNE-204ENST00000539208 EXOC6BQ9Y2D4 811 aa22.11■■□□□ 1.13
GNE-204ENST00000539208 AXIN2Q9Y2T1 843 aa22.11■■□□□ 1.13
GNE-204ENST00000539208 DCCP43146 1447 aa22.1■■□□□ 1.13
GNE-204ENST00000539208 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
GNE-204ENST00000539208 HEG1Q9ULI3 1381 aa22.1■■□□□ 1.13
GNE-204ENST00000539208 HSP90AB1P08238 724 aaKnown RBP22.09■■□□□ 1.13
GNE-204ENST00000539208 EIF2S2P20042 333 aaKnown RBP22.09■■□□□ 1.13
GNE-204ENST00000539208 KCNQ3O43525 872 aa22.09■■□□□ 1.13
GNE-204ENST00000539208 SSH3Q8TE77 659 aa22.09■■□□□ 1.13
GNE-204ENST00000539208 CHPF2Q9P2E5 772 aa22.09■■□□□ 1.13
GNE-204ENST00000539208 K7ELQ4 463 aaPredicted RBP22.08■■□□□ 1.13
GNE-204ENST00000539208 MCM4P33991 863 aa22.08■■□□□ 1.13
GNE-204ENST00000539208 RABEP1Q15276 862 aa22.08■■□□□ 1.13
GNE-204ENST00000539208 SIPA1L3O60292 1781 aaPredicted RBP22.07■■□□□ 1.12
GNE-204ENST00000539208 ERBB3P21860 1342 aa22.07■■□□□ 1.12
GNE-204ENST00000539208 STAP2Q9UGK3 403 aa22.07■■□□□ 1.12
GNE-204ENST00000539208 REC8O95072 547 aa22.06■■□□□ 1.12
GNE-204ENST00000539208 BEND3Q5T5X7 828 aa22.06■■□□□ 1.12
GNE-204ENST00000539208 DNAAF4Q8WXU2 420 aa22.06■■□□□ 1.12
GNE-204ENST00000539208 TUBGCP6Q96RT7 1819 aa22.06■■□□□ 1.12
GNE-204ENST00000539208 CD2BP2O95400 341 aaKnown RBP22.06■■□□□ 1.12
GNE-204ENST00000539208 ATF3P18847 181 aa22.06■■□□□ 1.12
GNE-204ENST00000539208 POLA2Q14181 598 aa22.06■■□□□ 1.12
GNE-204ENST00000539208 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
GNE-204ENST00000539208 RBM42Q9BTD8 480 aaKnown RBP22.05■■□□□ 1.12
GNE-204ENST00000539208 RGPD5Q99666 1765 aa22.05■■□□□ 1.12
GNE-204ENST00000539208 RAB11FIP3O75154 756 aa22.05■■□□□ 1.12
GNE-204ENST00000539208 MX1P20591 662 aa22.05■■□□□ 1.12
GNE-204ENST00000539208 AOX1Q06278 1338 aa22.04■■□□□ 1.12
GNE-204ENST00000539208 ERC2O15083 957 aa22.04■■□□□ 1.12
GNE-204ENST00000539208 GIGYF1O75420 1035 aaPredicted RBP22.04■■□□□ 1.12
GNE-204ENST00000539208 TMEM94Q12767 1356 aa22.04■■□□□ 1.12
GNE-204ENST00000539208 PI4KAP2A4QPH2 592 aa22.04■■□□□ 1.12
GNE-204ENST00000539208 PI4KAP1Q8N8J0 262 aa22.04■■□□□ 1.12
GNE-204ENST00000539208 ABCC6O95255 1503 aa22.04■■□□□ 1.12
GNE-204ENST00000539208 PLEKHG2Q9H7P9 1386 aa22.03■■□□□ 1.12
GNE-204ENST00000539208 ADCY9O60503 1353 aa22.03■■□□□ 1.12
GNE-204ENST00000539208 PPP1R42Q7Z4L9 355 aa22.02■■□□□ 1.12
GNE-204ENST00000539208 STRCP1A6NGW2 1772 aa22.01■■□□□ 1.11
GNE-204ENST00000539208 PLEKHG5O94827 1062 aa22.01■■□□□ 1.11
GNE-204ENST00000539208 ZC3H6P61129 1189 aaKnown RBP22.01■■□□□ 1.11
GNE-204ENST00000539208 COL18A1P39060 1754 aa22■■□□□ 1.11
GNE-204ENST00000539208 ALDH1L1O75891 902 aa21.99■■□□□ 1.11
GNE-204ENST00000539208 RAB3GAP1Q15042 981 aa21.99■■□□□ 1.11
GNE-204ENST00000539208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.99■■□□□ 1.111e-6■■■■□ 22.3
GNE-204ENST00000539208 HSP90AA1P07900 732 aaKnown RBP21.99■■□□□ 1.11
GNE-204ENST00000539208 NBPF7P0C2Y1 421 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms