RNA–Protein interactions for RNA: ENST00000539128.5

CYB561A3-212, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-212ENST00000539128 PKD1L3Q7Z443 1732 aa14.8□□□□□ -0.04
CYB561A3-212ENST00000539128 WDR43Q15061 677 aaKnown RBP eCLIP14.8□□□□□ -0.04
CYB561A3-212ENST00000539128 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
CYB561A3-212ENST00000539128 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
CYB561A3-212ENST00000539128 MTHFSDQ2M296 383 aaKnown RBP14.79□□□□□ -0.04
CYB561A3-212ENST00000539128 PIGBQ92521 554 aa14.79□□□□□ -0.04
CYB561A3-212ENST00000539128 RSPH6AQ9H0K4 717 aa14.79□□□□□ -0.04
CYB561A3-212ENST00000539128 KAT6BQ8WYB5 2073 aa14.78□□□□□ -0.04
CYB561A3-212ENST00000539128 MAPK8IP3Q9UPT6 1336 aa14.78□□□□□ -0.04
CYB561A3-212ENST00000539128 GNAT3A8MTJ3 354 aa14.78□□□□□ -0.04
CYB561A3-212ENST00000539128 SHANK3Q9BYB0 1731 aa14.78□□□□□ -0.04
CYB561A3-212ENST00000539128 RTF1Q92541 710 aaKnown RBP14.77□□□□□ -0.05
CYB561A3-212ENST00000539128 LRRC4BQ9NT99 713 aa14.77□□□□□ -0.05
CYB561A3-212ENST00000539128 CCNL1Q9UK58 526 aaPredicted RBP14.77□□□□□ -0.05
CYB561A3-212ENST00000539128 PALLDQ8WX93 1383 aa14.76□□□□□ -0.05
CYB561A3-212ENST00000539128 BTAF1O14981 1849 aa14.76□□□□□ -0.05
CYB561A3-212ENST00000539128 POLD1P28340 1107 aa14.76□□□□□ -0.05
CYB561A3-212ENST00000539128 DOT1LQ8TEK3 1739 aa14.75□□□□□ -0.05
CYB561A3-212ENST00000539128 TEFQ10587 303 aa14.75□□□□□ -0.05
CYB561A3-212ENST00000539128 NFATC2IPQ8NCF5 419 aa14.75□□□□□ -0.05
CYB561A3-212ENST00000539128 NLGN2Q8NFZ4 835 aa14.75□□□□□ -0.05
CYB561A3-212ENST00000539128 RNMTO43148 476 aaKnown RBP14.74□□□□□ -0.05
CYB561A3-212ENST00000539128 SLC16A10Q8TF71 515 aa14.74□□□□□ -0.05
CYB561A3-212ENST00000539128 AKT1S1Q96B36 256 aa14.74□□□□□ -0.05
CYB561A3-212ENST00000539128 PHACTR3Q96KR7 559 aa14.74□□□□□ -0.05
CYB561A3-212ENST00000539128 HTATSF1O43719 755 aaKnown RBP14.73□□□□□ -0.05
CYB561A3-212ENST00000539128 SLC52A2Q9HAB3 445 aa14.73□□□□□ -0.05
CYB561A3-212ENST00000539128 ASAP1Q9ULH1 1129 aa14.73□□□□□ -0.05
CYB561A3-212ENST00000539128 KDM6AO15550 1401 aaPredicted RBP14.73□□□□□ -0.05
CYB561A3-212ENST00000539128 PNPLA7Q6ZV29 1317 aa14.72□□□□□ -0.05
CYB561A3-212ENST00000539128 LOC102724428A0A0B4J2F2 783 aa14.72□□□□□ -0.05
CYB561A3-212ENST00000539128 SIK1P57059 783 aa14.72□□□□□ -0.05
CYB561A3-212ENST00000539128 LGR6Q9HBX8 967 aa14.72□□□□□ -0.05
CYB561A3-212ENST00000539128 ATG3Q9NT62 314 aa14.72□□□□□ -0.05
CYB561A3-212ENST00000539128 YBX3P16989 372 aaKnown RBP eCLIP14.71□□□□□ -0.05
CYB561A3-212ENST00000539128 RBM42Q9BTD8 480 aaKnown RBP14.71□□□□□ -0.05
CYB561A3-212ENST00000539128 TFCP2L1Q9NZI6 479 aa14.71□□□□□ -0.05
CYB561A3-212ENST00000539128 COL24A1Q17RW2 1714 aa14.71□□□□□ -0.05
CYB561A3-212ENST00000539128 QSER1Q2KHR3 1735 aa14.71□□□□□ -0.05
CYB561A3-212ENST00000539128 ATP6V1AP38606 617 aa14.7□□□□□ -0.06
CYB561A3-212ENST00000539128 TTC5Q8N0Z6 440 aa14.7□□□□□ -0.06
CYB561A3-212ENST00000539128 GRIN3BO60391 1043 aa14.69□□□□□ -0.06
CYB561A3-212ENST00000539128 KCNQ4P56696 695 aa14.69□□□□□ -0.06
CYB561A3-212ENST00000539128 LMOD3Q0VAK6 560 aa14.69□□□□□ -0.06
CYB561A3-212ENST00000539128 NFE2L2Q16236 605 aa14.69□□□□□ -0.06
CYB561A3-212ENST00000539128 PLEKHF1Q96S99 279 aa14.69□□□□□ -0.06
CYB561A3-212ENST00000539128 ATP10DQ9P241 1426 aa14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 FLAD1Q8NFF5 587 aa14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 IL17REQ8NFR9 667 aa14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 RUNDC1Q96C34 613 aa14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 AK7Q96M32 723 aa14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 ADAMTS8Q9UP79 889 aa14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 TUBGCP6Q96RT7 1819 aa14.68□□□□□ -0.06
CYB561A3-212ENST00000539128 TOGARAM1Q9Y4F4 1720 aa14.66□□□□□ -0.06
CYB561A3-212ENST00000539128 CEMIPQ8WUJ3 1361 aa14.65□□□□□ -0.06
CYB561A3-212ENST00000539128 BTBD11A6QL63 1104 aa14.65□□□□□ -0.06
CYB561A3-212ENST00000539128 MSH5O43196 834 aa14.65□□□□□ -0.06
CYB561A3-212ENST00000539128 RIPK4P57078 832 aa14.65□□□□□ -0.06
CYB561A3-212ENST00000539128 MCM10Q7L590 875 aa14.65□□□□□ -0.06
CYB561A3-212ENST00000539128 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
CYB561A3-212ENST00000539128 GPBP1L1Q9HC44 474 aaPredicted RBP14.65□□□□□ -0.06
CYB561A3-212ENST00000539128 ITGB4P16144 1822 aa14.64□□□□□ -0.07
CYB561A3-212ENST00000539128 HSPA6P17066 643 aa14.64□□□□□ -0.07
CYB561A3-212ENST00000539128 SLC39A6Q13433 755 aa14.64□□□□□ -0.07
CYB561A3-212ENST00000539128 TAF7Q15545 349 aaPredicted RBP14.64□□□□□ -0.07
CYB561A3-212ENST00000539128 CCDC146Q8IYE0 955 aa14.64□□□□□ -0.07
CYB561A3-212ENST00000539128 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
CYB561A3-212ENST00000539128 MRC1P22897 1456 aa14.63□□□□□ -0.07
CYB561A3-212ENST00000539128 TMPOP42166 694 aaKnown RBP14.63□□□□□ -0.07
CYB561A3-212ENST00000539128 ZNF790Q6PG37 636 aa14.63□□□□□ -0.07
CYB561A3-212ENST00000539128 TEX13AQ9BXU3 409 aaPredicted RBP14.63□□□□□ -0.07
CYB561A3-212ENST00000539128 LY75O60449 1722 aa14.63□□□□□ -0.07
CYB561A3-212ENST00000539128 STARD3NLO95772 234 aa14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 ITPK1Q13572 414 aa14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 DCTN1Q14203 1278 aa14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 NEUROD2Q15784 382 aa14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 RC3H1Q5TC82 1133 aaKnown RBP14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 MSL1Q68DK7 614 aa14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 LINC00116Q8NCU8 138 aa14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 ZNF526Q8TF50 670 aaPredicted RBP14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 FMNL2Q96PY5 1086 aa14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 RTCBQ9Y3I0 505 aaKnown RBP14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 SCN11AQ9UI33 1791 aa14.62□□□□□ -0.07
CYB561A3-212ENST00000539128 GNPATO15228 680 aa14.61□□□□□ -0.07
CYB561A3-212ENST00000539128 SSFA2P28290 1259 aa14.61□□□□□ -0.07
CYB561A3-212ENST00000539128 NPM2Q86SE8 214 aaKnown RBP14.61□□□□□ -0.07
CYB561A3-212ENST00000539128 COL23A1Q86Y22 540 aaPredicted RBP14.61□□□□□ -0.07
CYB561A3-212ENST00000539128 ADCY9O60503 1353 aa14.6□□□□□ -0.07
CYB561A3-212ENST00000539128 CNTNAP4Q9C0A0 1308 aa14.6□□□□□ -0.07
CYB561A3-212ENST00000539128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.59□□□□□ -0.07
CYB561A3-212ENST00000539128 PHF14O94880 888 aa14.59□□□□□ -0.07
CYB561A3-212ENST00000539128 ADRA2BP18089 450 aa14.59□□□□□ -0.07
CYB561A3-212ENST00000539128 CALD1Q05682 793 aaKnown RBP14.59□□□□□ -0.07
CYB561A3-212ENST00000539128 TRAPPC3LQ5T215 181 aa14.59□□□□□ -0.07
CYB561A3-212ENST00000539128 SLC4A9Q96Q91 983 aa14.59□□□□□ -0.07
CYB561A3-212ENST00000539128 RRP7AQ9Y3A4 280 aaKnown RBP14.59□□□□□ -0.07
CYB561A3-212ENST00000539128 ADAMTS7Q9UKP4 1686 aa14.58□□□□□ -0.07
CYB561A3-212ENST00000539128 CRKLP46109 303 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms