RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 NFATC2IPQ8NCF5 419 aa23.14■■□□□ 1.29
GPN3-202ENST00000537466 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
GPN3-202ENST00000537466 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
GPN3-202ENST00000537466 RNMTO43148 476 aaKnown RBP23.13■■□□□ 1.29
GPN3-202ENST00000537466 SIK1P57059 783 aa23.13■■□□□ 1.29
GPN3-202ENST00000537466 DLG5Q8TDM6 1919 aa23.13■■□□□ 1.29
GPN3-202ENST00000537466 SIPA1L3O60292 1781 aaPredicted RBP23.13■■□□□ 1.29
GPN3-202ENST00000537466 UBR3Q6ZT12 1888 aa23.12■■□□□ 1.29
GPN3-202ENST00000537466 FCHSD2O94868 740 aa23.12■■□□□ 1.29
GPN3-202ENST00000537466 GAS2L2Q8NHY3 880 aa23.12■■□□□ 1.29
GPN3-202ENST00000537466 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
GPN3-202ENST00000537466 MAP3K5Q99683 1374 aa23.12■■□□□ 1.29
GPN3-202ENST00000537466 PNPLA7Q6ZV29 1317 aa23.11■■□□□ 1.29
GPN3-202ENST00000537466 ZBTB7AO95365 584 aa23.11■■□□□ 1.29
GPN3-202ENST00000537466 SLC52A2Q9HAB3 445 aa23.11■■□□□ 1.29
GPN3-202ENST00000537466 TFCP2L1Q9NZI6 479 aa23.11■■□□□ 1.29
GPN3-202ENST00000537466 PRKRIP1Q9H875 184 aaPredicted RBP23.1■■□□□ 1.29
GPN3-202ENST00000537466 ITPK1Q13572 414 aa23.09■■□□□ 1.29
GPN3-202ENST00000537466 SLC4A9Q96Q91 983 aa23.09■■□□□ 1.29
GPN3-202ENST00000537466 SPON1Q9HCB6 807 aa23.09■■□□□ 1.29
GPN3-202ENST00000537466 TJP1Q07157 1748 aa23.08■■□□□ 1.29
GPN3-202ENST00000537466 GNAT3A8MTJ3 354 aa23.08■■□□□ 1.29
GPN3-202ENST00000537466 ATP6V1AP38606 617 aa23.08■■□□□ 1.29
GPN3-202ENST00000537466 LINC00116Q8NCU8 138 aa23.08■■□□□ 1.29
GPN3-202ENST00000537466 RBM42Q9BTD8 480 aaKnown RBP23.08■■□□□ 1.29
GPN3-202ENST00000537466 UBR2Q8IWV8 1755 aa23.07■■□□□ 1.28
GPN3-202ENST00000537466 COL24A1Q17RW2 1714 aa23.07■■□□□ 1.28
GPN3-202ENST00000537466 IL17REQ8NFR9 667 aa23.07■■□□□ 1.28
GPN3-202ENST00000537466 CICQ96RK0 1608 aaPredicted RBP23.07■■□□□ 1.28
GPN3-202ENST00000537466 ATF5Q9Y2D1 282 aaPredicted RBP23.06■■□□□ 1.28
GPN3-202ENST00000537466 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
GPN3-202ENST00000537466 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
GPN3-202ENST00000537466 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
GPN3-202ENST00000537466 AMIGO3Q86WK7 504 aa23.04■■□□□ 1.28
GPN3-202ENST00000537466 PLEKHF1Q96S99 279 aa23.04■■□□□ 1.28
GPN3-202ENST00000537466 MTFR1LQ9H019 292 aa23.04■■□□□ 1.28
GPN3-202ENST00000537466 KCPQ6ZWJ8 1503 aa23.03■■□□□ 1.28
GPN3-202ENST00000537466 CEMIPQ8WUJ3 1361 aa23.03■■□□□ 1.28
GPN3-202ENST00000537466 PTGER2P43116 358 aa23.03■■□□□ 1.28
GPN3-202ENST00000537466 COL23A1Q86Y22 540 aaPredicted RBP23.03■■□□□ 1.28
GPN3-202ENST00000537466 AK7Q96M32 723 aa23.03■■□□□ 1.28
GPN3-202ENST00000537466 HMGB2P26583 209 aaKnown RBP23.02■■□□□ 1.28
GPN3-202ENST00000537466 SMIM5Q71RC9 77 aa23.02■■□□□ 1.28
GPN3-202ENST00000537466 TEFQ10587 303 aa22.99■■□□□ 1.27
GPN3-202ENST00000537466 SGIP1Q9BQI5 828 aa22.99■■□□□ 1.27
GPN3-202ENST00000537466 MSH5O43196 834 aa22.98■■□□□ 1.27
GPN3-202ENST00000537466 MCM10Q7L590 875 aa22.98■■□□□ 1.27
GPN3-202ENST00000537466 SLC16A10Q8TF71 515 aa22.98■■□□□ 1.27
GPN3-202ENST00000537466 PHF14O94880 888 aa22.98■■□□□ 1.27
GPN3-202ENST00000537466 NEFMP07197 916 aa22.98■■□□□ 1.27
GPN3-202ENST00000537466 DCTN1Q14203 1278 aa22.98■■□□□ 1.27
GPN3-202ENST00000537466 PPP1R1BQ9UD71 204 aaPredicted RBP22.98■■□□□ 1.27
GPN3-202ENST00000537466 GNPATO15228 680 aa22.97■■□□□ 1.27
GPN3-202ENST00000537466 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
GPN3-202ENST00000537466 C4AP0C0L4 1744 aa22.96■■□□□ 1.27
GPN3-202ENST00000537466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.96■■□□□ 1.27
GPN3-202ENST00000537466 PNNQ9H307 717 aaKnown RBP22.96■■□□□ 1.27
GPN3-202ENST00000537466 FLAD1Q8NFF5 587 aa22.95■■□□□ 1.26
GPN3-202ENST00000537466 CNTNAP4Q9C0A0 1308 aa22.95■■□□□ 1.26
GPN3-202ENST00000537466 MAPK8IP3Q9UPT6 1336 aa22.95■■□□□ 1.26
GPN3-202ENST00000537466 HTATSF1O43719 755 aaKnown RBP22.94■■□□□ 1.26
GPN3-202ENST00000537466 SSFA2P28290 1259 aa22.94■■□□□ 1.26
GPN3-202ENST00000537466 NFE2L2Q16236 605 aa22.94■■□□□ 1.26
GPN3-202ENST00000537466 RC3H1Q5TC82 1133 aaKnown RBP22.93■■□□□ 1.26
GPN3-202ENST00000537466 ZNF790Q6PG37 636 aa22.93■■□□□ 1.26
GPN3-202ENST00000537466 DNAJC10Q8IXB1 793 aa22.93■■□□□ 1.26
GPN3-202ENST00000537466 WDR43Q15061 677 aaKnown RBP eCLIP22.92■■□□□ 1.26
GPN3-202ENST00000537466 TTC5Q8N0Z6 440 aa22.92■■□□□ 1.26
GPN3-202ENST00000537466 CRKLP46109 303 aaKnown RBP22.92■■□□□ 1.26
GPN3-202ENST00000537466 MSL1Q68DK7 614 aa22.92■■□□□ 1.26
GPN3-202ENST00000537466 CCDC146Q8IYE0 955 aa22.92■■□□□ 1.26
GPN3-202ENST00000537466 ADAMTS8Q9UP79 889 aa22.92■■□□□ 1.26
GPN3-202ENST00000537466 BTBD11A6QL63 1104 aa22.91■■□□□ 1.26
GPN3-202ENST00000537466 KCNQ3O43525 872 aa22.91■■□□□ 1.26
GPN3-202ENST00000537466 ZNF496Q96IT1 587 aaPredicted RBP22.91■■□□□ 1.26
GPN3-202ENST00000537466 RTCBQ9Y3I0 505 aaKnown RBP22.91■■□□□ 1.26
GPN3-202ENST00000537466 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
GPN3-202ENST00000537466 CCDC184Q52MB2 194 aa22.9■■□□□ 1.26
GPN3-202ENST00000537466 ARXQ96QS3 562 aa22.9■■□□□ 1.26
GPN3-202ENST00000537466 RPS6KA4O75676 772 aa22.89■■□□□ 1.25
GPN3-202ENST00000537466 VSIG10Q8N0Z9 540 aa22.89■■□□□ 1.25
GPN3-202ENST00000537466 HEG1Q9ULI3 1381 aa22.88■■□□□ 1.25
GPN3-202ENST00000537466 CYP19A1P11511 503 aaPredicted RBP22.88■■□□□ 1.25
GPN3-202ENST00000537466 INTS5Q6P9B9 1019 aaKnown RBP22.88■■□□□ 1.25
GPN3-202ENST00000537466 THUMPD2Q9BTF0 503 aaKnown RBP22.88■■□□□ 1.25
GPN3-202ENST00000537466 POLD1P28340 1107 aa22.87■■□□□ 1.25
GPN3-202ENST00000537466 TRAPPC3LQ5T215 181 aa22.87■■□□□ 1.25
GPN3-202ENST00000537466 TMPOP42166 694 aaKnown RBP22.86■■□□□ 1.25
GPN3-202ENST00000537466 ARHGEF1Q92888 912 aaKnown RBP22.86■■□□□ 1.25
GPN3-202ENST00000537466 FHDC1Q9C0D6 1143 aaPredicted RBP22.86■■□□□ 1.25
GPN3-202ENST00000537466 ANP32CO43423 234 aa22.85■■□□□ 1.25
GPN3-202ENST00000537466 RIPK4P57078 832 aa22.85■■□□□ 1.25
GPN3-202ENST00000537466 RUNDC1Q96C34 613 aa22.85■■□□□ 1.25
GPN3-202ENST00000537466 FMNL2Q96PY5 1086 aa22.85■■□□□ 1.25
GPN3-202ENST00000537466 CCDC87Q9NVE4 849 aa22.85■■□□□ 1.25
GPN3-202ENST00000537466 ADRA2BP18089 450 aa22.85■■□□□ 1.25
GPN3-202ENST00000537466 TAF7Q15545 349 aaPredicted RBP22.85■■□□□ 1.25
GPN3-202ENST00000537466 MIS18AQ9NYP9 233 aa22.85■■□□□ 1.25
GPN3-202ENST00000537466 RRP7AQ9Y3A4 280 aaKnown RBP22.85■■□□□ 1.25
GPN3-202ENST00000537466 ZBTB1Q9Y2K1 713 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms