RNA–Protein interactions for RNA: ENST00000537400.1

PRKAB1-203, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-203ENST00000537400 SBF2Q86WG5 1849 aa18.4■□□□□ 0.54
PRKAB1-203ENST00000537400 PIGBQ92521 554 aa18.4■□□□□ 0.54
PRKAB1-203ENST00000537400 SYTL4Q96C24 671 aaPredicted RBP18.4■□□□□ 0.54
PRKAB1-203ENST00000537400 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
PRKAB1-203ENST00000537400 IFT57Q9NWB7 429 aa18.4■□□□□ 0.54
PRKAB1-203ENST00000537400 SALL2Q9Y467 1007 aaPredicted RBP18.4■□□□□ 0.54
PRKAB1-203ENST00000537400 ZBED9Q6R2W3 1325 aa18.4■□□□□ 0.54
PRKAB1-203ENST00000537400 KCNQ2O43526 872 aa18.39■□□□□ 0.53
PRKAB1-203ENST00000537400 CFAP44Q96MT7 982 aa18.39■□□□□ 0.53
PRKAB1-203ENST00000537400 ITGB4P16144 1822 aa18.39■□□□□ 0.53
PRKAB1-203ENST00000537400 SIPA1L3O60292 1781 aaPredicted RBP18.38■□□□□ 0.53
PRKAB1-203ENST00000537400 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
PRKAB1-203ENST00000537400 GNAI1P63096 354 aa18.38■□□□□ 0.53
PRKAB1-203ENST00000537400 CCDC125Q86Z20 511 aa18.38■□□□□ 0.53
PRKAB1-203ENST00000537400 SMARCC1Q92922 1105 aaPredicted RBP18.38■□□□□ 0.53
PRKAB1-203ENST00000537400 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
PRKAB1-203ENST00000537400 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
PRKAB1-203ENST00000537400 CHL1O00533 1208 aa18.37■□□□□ 0.53
PRKAB1-203ENST00000537400 TRIM37O94972 964 aa18.37■□□□□ 0.53
PRKAB1-203ENST00000537400 GOLGA2Q08379 1002 aa18.37■□□□□ 0.53
PRKAB1-203ENST00000537400 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
PRKAB1-203ENST00000537400 E9PSI1 815 aa18.35■□□□□ 0.53
PRKAB1-203ENST00000537400 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
PRKAB1-203ENST00000537400 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
PRKAB1-203ENST00000537400 TTC5Q8N0Z6 440 aa18.34■□□□□ 0.53
PRKAB1-203ENST00000537400 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
PRKAB1-203ENST00000537400 TSPYL4Q9UJ04 414 aa18.34■□□□□ 0.53
PRKAB1-203ENST00000537400 PAPPAQ13219 1627 aa18.34■□□□□ 0.53
PRKAB1-203ENST00000537400 BTAF1O14981 1849 aa18.33■□□□□ 0.53
PRKAB1-203ENST00000537400 PLSCR1O15162 318 aa18.33■□□□□ 0.52
PRKAB1-203ENST00000537400 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.52
PRKAB1-203ENST00000537400 HMGB2P26583 209 aaKnown RBP18.32■□□□□ 0.52
PRKAB1-203ENST00000537400 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
PRKAB1-203ENST00000537400 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
PRKAB1-203ENST00000537400 LAS1LQ9Y4W2 734 aaKnown RBP18.32■□□□□ 0.52
PRKAB1-203ENST00000537400 PALLDQ8WX93 1383 aa18.31■□□□□ 0.52
PRKAB1-203ENST00000537400 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
PRKAB1-203ENST00000537400 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
PRKAB1-203ENST00000537400 KDM3BQ7LBC6 1761 aa18.31■□□□□ 0.52
PRKAB1-203ENST00000537400 TNS1Q9HBL0 1735 aaKnown RBP18.31■□□□□ 0.52
PRKAB1-203ENST00000537400 APBA3O96018 575 aa18.3■□□□□ 0.52
PRKAB1-203ENST00000537400 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
PRKAB1-203ENST00000537400 VSIG10Q8N0Z9 540 aa18.3■□□□□ 0.52
PRKAB1-203ENST00000537400 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
PRKAB1-203ENST00000537400 TRMT2AQ8IZ69 625 aaKnown RBP18.29■□□□□ 0.52
PRKAB1-203ENST00000537400 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
PRKAB1-203ENST00000537400 RGPD3A6NKT7 1758 aaPredicted RBP18.29■□□□□ 0.52
PRKAB1-203ENST00000537400 RGPD4Q7Z3J3 1758 aa18.29■□□□□ 0.52
PRKAB1-203ENST00000537400 UBR2Q8IWV8 1755 aa18.29■□□□□ 0.52
PRKAB1-203ENST00000537400 HEG1Q9ULI3 1381 aa18.29■□□□□ 0.52
PRKAB1-203ENST00000537400 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
PRKAB1-203ENST00000537400 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
PRKAB1-203ENST00000537400 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
PRKAB1-203ENST00000537400 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
PRKAB1-203ENST00000537400 SLC27A3Q5K4L6 730 aa18.28■□□□□ 0.52
PRKAB1-203ENST00000537400 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
PRKAB1-203ENST00000537400 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
PRKAB1-203ENST00000537400 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
PRKAB1-203ENST00000537400 LOC102724428A0A0B4J2F2 783 aa18.27■□□□□ 0.52
PRKAB1-203ENST00000537400 BAG6P46379 1132 aa18.27■□□□□ 0.52
PRKAB1-203ENST00000537400 SIK1P57059 783 aa18.27■□□□□ 0.52
PRKAB1-203ENST00000537400 YTHDC1Q96MU7 727 aaKnown RBP18.27■□□□□ 0.52
PRKAB1-203ENST00000537400 TEX13AQ9BXU3 409 aaPredicted RBP18.27■□□□□ 0.52
PRKAB1-203ENST00000537400 KCNQ3O43525 872 aa18.26■□□□□ 0.51
PRKAB1-203ENST00000537400 HOXB7P09629 217 aa18.26■□□□□ 0.51
PRKAB1-203ENST00000537400 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
PRKAB1-203ENST00000537400 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
PRKAB1-203ENST00000537400 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
PRKAB1-203ENST00000537400 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
PRKAB1-203ENST00000537400 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
PRKAB1-203ENST00000537400 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
PRKAB1-203ENST00000537400 TSR2Q969E8 191 aaKnown RBP18.25■□□□□ 0.51
PRKAB1-203ENST00000537400 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
PRKAB1-203ENST00000537400 LY75O60449 1722 aa18.25■□□□□ 0.51
PRKAB1-203ENST00000537400 LRP5O75197 1615 aa18.24■□□□□ 0.51
PRKAB1-203ENST00000537400 GIGYF1O75420 1035 aaPredicted RBP18.23■□□□□ 0.51
PRKAB1-203ENST00000537400 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
PRKAB1-203ENST00000537400 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
PRKAB1-203ENST00000537400 CT47B1P0C2W7 299 aaPredicted RBP18.22■□□□□ 0.51
PRKAB1-203ENST00000537400 ATP6V1AP38606 617 aa18.22■□□□□ 0.51
PRKAB1-203ENST00000537400 TXNRD1Q16881 649 aa18.22■□□□□ 0.51
PRKAB1-203ENST00000537400 SLC4A9Q96Q91 983 aa18.22■□□□□ 0.51
PRKAB1-203ENST00000537400 STARD3NLO95772 234 aa18.2■□□□□ 0.5
PRKAB1-203ENST00000537400 EN1Q05925 392 aaPredicted RBP18.2■□□□□ 0.5
PRKAB1-203ENST00000537400 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
PRKAB1-203ENST00000537400 PROM2Q8N271 834 aa18.2■□□□□ 0.5
PRKAB1-203ENST00000537400 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
PRKAB1-203ENST00000537400 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
PRKAB1-203ENST00000537400 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
PRKAB1-203ENST00000537400 ITPK1Q13572 414 aa18.18■□□□□ 0.5
PRKAB1-203ENST00000537400 DNAJC10Q8IXB1 793 aa18.18■□□□□ 0.5
PRKAB1-203ENST00000537400 C5P01031 1676 aa18.18■□□□□ 0.5
PRKAB1-203ENST00000537400 ERBB4Q15303 1308 aa18.18■□□□□ 0.5
PRKAB1-203ENST00000537400 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
PRKAB1-203ENST00000537400 EZH2Q15910 746 aaKnown RBP18.17■□□□□ 0.5
PRKAB1-203ENST00000537400 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
PRKAB1-203ENST00000537400 RC3H1Q5TC82 1133 aaKnown RBP18.17■□□□□ 0.5
PRKAB1-203ENST00000537400 DEFB132Q7Z7B7 95 aa18.17■□□□□ 0.5
PRKAB1-203ENST00000537400 LRRC4BQ9NT99 713 aa18.17■□□□□ 0.5
PRKAB1-203ENST00000537400 TJP1Q07157 1748 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms