RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TFCP2L1Q9NZI6 479 aa9.85□□□□□ -0.83
CPSF7-216ENST00000536548 ISY1Q9ULR0 285 aaKnown RBP9.85□□□□□ -0.83
CPSF7-216ENST00000536548 COL18A1P39060 1754 aa9.84□□□□□ -0.83
CPSF7-216ENST00000536548 GOLGA6L3A6NEY3 463 aa9.84□□□□□ -0.83
CPSF7-216ENST00000536548 MSL1Q68DK7 614 aa9.84□□□□□ -0.83
CPSF7-216ENST00000536548 USP6P35125 1406 aa9.83□□□□□ -0.84
CPSF7-216ENST00000536548 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
CPSF7-216ENST00000536548 NMRK2Q9NPI5 230 aa9.83□□□□□ -0.84
CPSF7-216ENST00000536548 WDR17Q8IZU2 1322 aa9.82□□□□□ -0.84
CPSF7-216ENST00000536548 HSPA1AP0DMV8 641 aaKnown RBP9.82□□□□□ -0.84
CPSF7-216ENST00000536548 HSPA1BP0DMV9 641 aaKnown RBP9.82□□□□□ -0.84
CPSF7-216ENST00000536548 POLR3AO14802 1390 aaPredicted RBP9.82□□□□□ -0.84
CPSF7-216ENST00000536548 IGHDP01880 384 aa9.81□□□□□ -0.84
CPSF7-216ENST00000536548 PTMSP20962 102 aa9.81□□□□□ -0.84
CPSF7-216ENST00000536548 NCBP3Q53F19 620 aaKnown RBP9.81□□□□□ -0.84
CPSF7-216ENST00000536548 TBC1D32Q96NH3 1257 aa9.81□□□□□ -0.84
CPSF7-216ENST00000536548 RWDD1Q9H446 243 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-216ENST00000536548 ANTXR1Q9H6X2 564 aa9.81□□□□□ -0.84
CPSF7-216ENST00000536548 CHMP5Q9NZZ3 219 aa9.81□□□□□ -0.84
CPSF7-216ENST00000536548 ADGRB1O14514 1584 aa9.8□□□□□ -0.84
CPSF7-216ENST00000536548 APAF1O14727 1248 aa9.8□□□□□ -0.84
CPSF7-216ENST00000536548 BCAR3O75815 825 aa9.8□□□□□ -0.84
CPSF7-216ENST00000536548 CLCN1P35523 988 aa9.8□□□□□ -0.84
CPSF7-216ENST00000536548 COL23A1Q86Y22 540 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-216ENST00000536548 PNNQ9H307 717 aaKnown RBP9.8□□□□□ -0.84
CPSF7-216ENST00000536548 CD2APQ9Y5K6 639 aa9.8□□□□□ -0.84
CPSF7-216ENST00000536548 TNS2Q63HR2 1409 aa9.8□□□□□ -0.84
CPSF7-216ENST00000536548 KIAA1210Q9ULL0 1709 aa9.79□□□□□ -0.84
CPSF7-216ENST00000536548 FSD2A1L4K1 749 aa9.79□□□□□ -0.84
CPSF7-216ENST00000536548 DDX11L8A8MPP1 907 aa9.79□□□□□ -0.84
CPSF7-216ENST00000536548 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
CPSF7-216ENST00000536548 MRE11P49959 708 aa9.79□□□□□ -0.84
CPSF7-216ENST00000536548 CARD10Q9BWT7 1032 aa9.79□□□□□ -0.84
CPSF7-216ENST00000536548 CDK19Q9BWU1 502 aa9.79□□□□□ -0.84
CPSF7-216ENST00000536548 IGSF1Q8N6C5 1336 aa9.79□□□□□ -0.84
CPSF7-216ENST00000536548 MCM4P33991 863 aa9.78□□□□□ -0.84
CPSF7-216ENST00000536548 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
CPSF7-216ENST00000536548 CCDC146Q8IYE0 955 aa9.78□□□□□ -0.84
CPSF7-216ENST00000536548 RBM46Q8TBY0 533 aaKnown RBP9.78□□□□□ -0.84
CPSF7-216ENST00000536548 SLKQ9H2G2 1235 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-216ENST00000536548 RRAGDQ9NQL2 400 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-216ENST00000536548 NLRP6P59044 892 aa9.77□□□□□ -0.85
CPSF7-216ENST00000536548 WDR63Q8IWG1 891 aa9.77□□□□□ -0.85
CPSF7-216ENST00000536548 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
CPSF7-216ENST00000536548 COG6Q9Y2V7 657 aa9.77□□□□□ -0.85
CPSF7-216ENST00000536548 CCDC61Q9Y6R9 512 aa9.77□□□□□ -0.85
CPSF7-216ENST00000536548 SLIT3O75094 1523 aa9.77□□□□□ -0.85
CPSF7-216ENST00000536548 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
CPSF7-216ENST00000536548 SOX12O15370 315 aa9.76□□□□□ -0.85
CPSF7-216ENST00000536548 RRP9O43818 475 aaKnown RBP9.76□□□□□ -0.85
CPSF7-216ENST00000536548 HSP90AA1P07900 732 aaKnown RBP9.76□□□□□ -0.85
CPSF7-216ENST00000536548 CT47B1P0C2W7 299 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-216ENST00000536548 RUNDC1Q96C34 613 aa9.76□□□□□ -0.85
CPSF7-216ENST00000536548 NAP1L5Q96NT1 182 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-216ENST00000536548 ABCC6O95255 1503 aa9.76□□□□□ -0.85
CPSF7-216ENST00000536548 PPIP5K1Q6PFW1 1433 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 SEC24BO95487 1268 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 XRCC6P12956 609 aaKnown RBP eCLIP9.75□□□□□ -0.85
CPSF7-216ENST00000536548 CCDC27Q2M243 656 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 HSCBQ8IWL3 235 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 C16orf71Q8IYS4 520 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-216ENST00000536548 PANK1Q8TE04 598 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 MYH16Q9H6N6 1097 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 SPINK5Q9NQ38 1064 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-216ENST00000536548 CIZ1Q9ULV3 898 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-216ENST00000536548 PDZRN3Q9UPQ7 1066 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 LY75O60449 1722 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 TNRC18O15417 2968 aaPredicted RBP9.75□□□□□ -0.85
CPSF7-216ENST00000536548 SBNO2Q9Y2G9 1366 aa9.75□□□□□ -0.85
CPSF7-216ENST00000536548 TRAK2O60296 914 aa9.74□□□□□ -0.85
CPSF7-216ENST00000536548 RARSP54136 660 aaKnown RBP9.74□□□□□ -0.85
CPSF7-216ENST00000536548 FSTL1Q12841 308 aa9.74□□□□□ -0.85
CPSF7-216ENST00000536548 SKOR2Q2VWA4 1001 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-216ENST00000536548 ARHGEF25Q86VW2 580 aa9.74□□□□□ -0.85
CPSF7-216ENST00000536548 PIK3C2AO00443 1686 aa9.74□□□□□ -0.85
CPSF7-216ENST00000536548 CPSF1Q10570 1443 aaKnown RBP9.73□□□□□ -0.85
CPSF7-216ENST00000536548 SMIM5Q71RC9 77 aa9.73□□□□□ -0.85
CPSF7-216ENST00000536548 SYTL4Q96C24 671 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-216ENST00000536548 CFAP53Q96M91 514 aa9.73□□□□□ -0.85
CPSF7-216ENST00000536548 C22orf23Q9BZE7 217 aa9.73□□□□□ -0.85
CPSF7-216ENST00000536548 CICQ96RK0 1608 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-216ENST00000536548 TPM2P07951 284 aa9.72□□□□□ -0.85
CPSF7-216ENST00000536548 GBP4Q96PP9 640 aa9.72□□□□□ -0.85
CPSF7-216ENST00000536548 CCNL1Q9UK58 526 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-216ENST00000536548 PRIM1P49642 420 aaKnown RBP9.71□□□□□ -0.86
CPSF7-216ENST00000536548 HSP90AA2PQ14568 343 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-216ENST00000536548 MVPQ14764 893 aaKnown RBP9.71□□□□□ -0.86
CPSF7-216ENST00000536548 ZKSCAN2Q63HK3 967 aa9.71□□□□□ -0.86
CPSF7-216ENST00000536548 DDX54Q8TDD1 881 aaKnown RBP9.71□□□□□ -0.86
CPSF7-216ENST00000536548 SNX21Q969T3 373 aa9.71□□□□□ -0.86
CPSF7-216ENST00000536548 TRIM44Q96DX7 344 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-216ENST00000536548 GRPEL1Q9HAV7 217 aa9.71□□□□□ -0.86
CPSF7-216ENST00000536548 RRAGCQ9HB90 399 aa9.71□□□□□ -0.86
CPSF7-216ENST00000536548 N4BP2Q86UW6 1770 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-216ENST00000536548 IL2RBP14784 551 aa9.7□□□□□ -0.86
CPSF7-216ENST00000536548 HDAC1Q13547 482 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-216ENST00000536548 ARHGAP27Q6ZUM4 889 aa9.7□□□□□ -0.86
CPSF7-216ENST00000536548 MORC1Q86VD1 984 aa9.7□□□□□ -0.86
CPSF7-216ENST00000536548 AMIGO3Q86WK7 504 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms