RNA–Protein interactions for RNA: ENST00000535645.1

C2CD3-208, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-208ENST00000535645 SF3B2Q13435 895 aaKnown RBP9.43□□□□□ -0.9
C2CD3-208ENST00000535645 PIGBQ92521 554 aa9.43□□□□□ -0.9
C2CD3-208ENST00000535645 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
C2CD3-208ENST00000535645 KDM6AO15550 1401 aaPredicted RBP9.42□□□□□ -0.9
C2CD3-208ENST00000535645 KCNQ2O43526 872 aa9.42□□□□□ -0.9
C2CD3-208ENST00000535645 TRIM37O94972 964 aa9.42□□□□□ -0.9
C2CD3-208ENST00000535645 SMARCC1Q92922 1105 aaPredicted RBP9.42□□□□□ -0.9
C2CD3-208ENST00000535645 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
C2CD3-208ENST00000535645 MIS18AQ9NYP9 233 aa9.42□□□□□ -0.9
C2CD3-208ENST00000535645 SCN11AQ9UI33 1791 aa9.42□□□□□ -0.9
C2CD3-208ENST00000535645 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
C2CD3-208ENST00000535645 CHL1O00533 1208 aa9.41□□□□□ -0.9
C2CD3-208ENST00000535645 SLC39A6Q13433 755 aa9.41□□□□□ -0.9
C2CD3-208ENST00000535645 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
C2CD3-208ENST00000535645 BCL11BQ9C0K0 894 aaPredicted RBP9.41□□□□□ -0.9
C2CD3-208ENST00000535645 BCL9O00512 1426 aa9.4□□□□□ -0.9
C2CD3-208ENST00000535645 ZNF521Q96K83 1311 aa9.4□□□□□ -0.9
C2CD3-208ENST00000535645 PTCD1O75127 700 aaKnown RBP9.4□□□□□ -0.9
C2CD3-208ENST00000535645 SLFN5Q08AF3 891 aa9.4□□□□□ -0.9
C2CD3-208ENST00000535645 ZNF790Q6PG37 636 aa9.4□□□□□ -0.9
C2CD3-208ENST00000535645 CDCA7LQ96GN5 454 aa9.4□□□□□ -0.9
C2CD3-208ENST00000535645 FMNL2Q96PY5 1086 aa9.4□□□□□ -0.9
C2CD3-208ENST00000535645 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
C2CD3-208ENST00000535645 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.91
C2CD3-208ENST00000535645 APBA3O96018 575 aa9.39□□□□□ -0.91
C2CD3-208ENST00000535645 ZNF853P0CG23 659 aa9.39□□□□□ -0.91
C2CD3-208ENST00000535645 TSR2Q969E8 191 aaKnown RBP9.39□□□□□ -0.91
C2CD3-208ENST00000535645 CHMP4AQ9BY43 222 aa9.39□□□□□ -0.91
C2CD3-208ENST00000535645 ASAP1Q9ULH1 1129 aa9.39□□□□□ -0.91
C2CD3-208ENST00000535645 DOT1LQ8TEK3 1739 aa9.39□□□□□ -0.91
C2CD3-208ENST00000535645 ITGB4P16144 1822 aa9.38□□□□□ -0.91
C2CD3-208ENST00000535645 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
C2CD3-208ENST00000535645 SPINK5Q9NQ38 1064 aaPredicted RBP9.38□□□□□ -0.91
C2CD3-208ENST00000535645 ATG3Q9NT62 314 aa9.38□□□□□ -0.91
C2CD3-208ENST00000535645 FANCIQ9NVI1 1328 aa9.37□□□□□ -0.91
C2CD3-208ENST00000535645 MRC1P22897 1456 aa9.37□□□□□ -0.91
C2CD3-208ENST00000535645 ELL2O00472 640 aaPredicted RBP9.37□□□□□ -0.91
C2CD3-208ENST00000535645 KCNQ3O43525 872 aa9.37□□□□□ -0.91
C2CD3-208ENST00000535645 EIF4A1P60842 406 aaKnown RBP9.37□□□□□ -0.91
C2CD3-208ENST00000535645 EXOSC9Q06265 439 aaKnown RBP9.37□□□□□ -0.91
C2CD3-208ENST00000535645 DUSP27Q5VZP5 1158 aa9.37□□□□□ -0.91
C2CD3-208ENST00000535645 TEX13AQ9BXU3 409 aaPredicted RBP9.37□□□□□ -0.91
C2CD3-208ENST00000535645 PALLDQ8WX93 1383 aa9.37□□□□□ -0.91
C2CD3-208ENST00000535645 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
C2CD3-208ENST00000535645 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
C2CD3-208ENST00000535645 CENPBP07199 599 aaPredicted RBP9.36□□□□□ -0.91
C2CD3-208ENST00000535645 SNRPA1P09661 255 aaKnown RBP9.36□□□□□ -0.91
C2CD3-208ENST00000535645 ATP6V1AP38606 617 aa9.36□□□□□ -0.91
C2CD3-208ENST00000535645 BAG6P46379 1132 aa9.36□□□□□ -0.91
C2CD3-208ENST00000535645 SIK1P57059 783 aa9.36□□□□□ -0.91
C2CD3-208ENST00000535645 TWISTNBQ3B726 338 aaPredicted RBP9.36□□□□□ -0.91
C2CD3-208ENST00000535645 PTF1AQ7RTS3 328 aa9.36□□□□□ -0.91
C2CD3-208ENST00000535645 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
C2CD3-208ENST00000535645 ZNF496Q96IT1 587 aaPredicted RBP9.36□□□□□ -0.91
C2CD3-208ENST00000535645 TOGARAM1Q9Y4F4 1720 aa9.36□□□□□ -0.91
C2CD3-208ENST00000535645 SBF2Q86WG5 1849 aa9.35□□□□□ -0.91
C2CD3-208ENST00000535645 STARD3NLO95772 234 aa9.35□□□□□ -0.91
C2CD3-208ENST00000535645 EIF2S2P20042 333 aaKnown RBP9.35□□□□□ -0.91
C2CD3-208ENST00000535645 NPM2Q86SE8 214 aaKnown RBP9.35□□□□□ -0.91
C2CD3-208ENST00000535645 TRMT2AQ8IZ69 625 aaKnown RBP9.35□□□□□ -0.91
C2CD3-208ENST00000535645 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
C2CD3-208ENST00000535645 CCNL1Q9UK58 526 aaPredicted RBP9.35□□□□□ -0.91
C2CD3-208ENST00000535645 NHSQ6T4R5 1651 aa9.35□□□□□ -0.91
C2CD3-208ENST00000535645 SOS1Q07889 1333 aaPredicted RBP9.34□□□□□ -0.91
C2CD3-208ENST00000535645 BTAF1O14981 1849 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 PLSCR1O15162 318 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
C2CD3-208ENST00000535645 HOXB7P09629 217 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 CT47B1P0C2W7 299 aaPredicted RBP9.34□□□□□ -0.91
C2CD3-208ENST00000535645 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 HDGFL1Q5TGJ6 251 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 C8orf58Q8NAV2 365 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 STK31Q9BXU1 1019 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 SIPA1L3O60292 1781 aaPredicted RBP9.34□□□□□ -0.91
C2CD3-208ENST00000535645 HEG1Q9ULI3 1381 aa9.34□□□□□ -0.91
C2CD3-208ENST00000535645 KRT24Q2M2I5 525 aa9.33□□□□□ -0.92
C2CD3-208ENST00000535645 DNAJC10Q8IXB1 793 aa9.33□□□□□ -0.92
C2CD3-208ENST00000535645 TSPYL6Q8N831 410 aa9.33□□□□□ -0.92
C2CD3-208ENST00000535645 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
C2CD3-208ENST00000535645 ZNF428Q96B54 188 aa9.33□□□□□ -0.92
C2CD3-208ENST00000535645 USP16Q9Y5T5 823 aa9.33□□□□□ -0.92
C2CD3-208ENST00000535645 VAMP4O75379 141 aa9.32□□□□□ -0.92
C2CD3-208ENST00000535645 EN1Q05925 392 aaPredicted RBP9.32□□□□□ -0.92
C2CD3-208ENST00000535645 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
C2CD3-208ENST00000535645 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
C2CD3-208ENST00000535645 PRAMEF22A3QJZ6 481 aa9.31□□□□□ -0.92
C2CD3-208ENST00000535645 KCNQ4P56696 695 aa9.31□□□□□ -0.92
C2CD3-208ENST00000535645 ARXQ96QS3 562 aa9.31□□□□□ -0.92
C2CD3-208ENST00000535645 SMC4Q9NTJ3 1288 aa9.31□□□□□ -0.92
C2CD3-208ENST00000535645 RCAN3Q9UKA8 241 aa9.31□□□□□ -0.92
C2CD3-208ENST00000535645 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-208ENST00000535645 TCERG1O14776 1098 aaKnown RBP9.3□□□□□ -0.92
C2CD3-208ENST00000535645 A1BGP04217 495 aa9.3□□□□□ -0.92
C2CD3-208ENST00000535645 SLC4A2P04920 1241 aa9.3□□□□□ -0.92
C2CD3-208ENST00000535645 CYP19A1P11511 503 aaPredicted RBP9.3□□□□□ -0.92
C2CD3-208ENST00000535645 MYL6BP14649 208 aa9.3□□□□□ -0.92
C2CD3-208ENST00000535645 CANXP27824 592 aaKnown RBP9.3□□□□□ -0.92
C2CD3-208ENST00000535645 CRKLP46109 303 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms