RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 MS4A1P11836 297 aa21.9■■□□□ 1.1
VPS51-216ENST00000534591 ZNF530Q6P9A1 599 aaPredicted RBP21.9■■□□□ 1.1
VPS51-216ENST00000534591 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
VPS51-216ENST00000534591 FRAT1Q92837 279 aaPredicted RBP21.9■■□□□ 1.1
VPS51-216ENST00000534591 THRAP3Q9Y2W1 955 aaKnown RBP21.9■■□□□ 1.1
VPS51-216ENST00000534591 TWISTNBQ3B726 338 aaPredicted RBP21.9■■□□□ 1.1
VPS51-216ENST00000534591 IL17REQ8NFR9 667 aa21.9■■□□□ 1.1
VPS51-216ENST00000534591 BCL2L13Q9BXK5 485 aa21.9■■□□□ 1.1
VPS51-216ENST00000534591 DISP2A7MBM2 1401 aa21.9■■□□□ 1.1
VPS51-216ENST00000534591 CEMIPQ8WUJ3 1361 aa21.89■■□□□ 1.1
VPS51-216ENST00000534591 KIF16BQ96L93 1317 aa21.89■■□□□ 1.09
VPS51-216ENST00000534591 C1orf141Q5JVX7 400 aa21.89■■□□□ 1.09
VPS51-216ENST00000534591 ZKSCAN2Q63HK3 967 aa21.89■■□□□ 1.09
VPS51-216ENST00000534591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.09
VPS51-216ENST00000534591 TATP17735 454 aaPredicted RBP21.88■■□□□ 1.09
VPS51-216ENST00000534591 TSPYL6Q8N831 410 aa21.88■■□□□ 1.09
VPS51-216ENST00000534591 C8orf58Q8NAV2 365 aa21.88■■□□□ 1.09
VPS51-216ENST00000534591 TSPYL4Q9UJ04 414 aa21.88■■□□□ 1.09
VPS51-216ENST00000534591 OVOS2A0A0G2JMS6 1433 aa21.87■■□□□ 1.09
VPS51-216ENST00000534591 IPO8O15397 1037 aaKnown RBP21.87■■□□□ 1.09
VPS51-216ENST00000534591 TAF7Q15545 349 aaPredicted RBP21.87■■□□□ 1.09
VPS51-216ENST00000534591 CCDC125Q86Z20 511 aa21.87■■□□□ 1.09
VPS51-216ENST00000534591 CARD10Q9BWT7 1032 aa21.86■■□□□ 1.09
VPS51-216ENST00000534591 DEFB132Q7Z7B7 95 aa21.85■■□□□ 1.09
VPS51-216ENST00000534591 SPG7Q9UQ90 795 aa21.85■■□□□ 1.09
VPS51-216ENST00000534591 AAMPQ13685 434 aa21.85■■□□□ 1.09
VPS51-216ENST00000534591 SHANK3Q9BYB0 1731 aa21.84■■□□□ 1.09
VPS51-216ENST00000534591 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.09
VPS51-216ENST00000534591 ELL2O00472 640 aaPredicted RBP21.82■■□□□ 1.08
VPS51-216ENST00000534591 ATF7IPQ6VMQ6 1270 aa21.82■■□□□ 1.08
VPS51-216ENST00000534591 DZIP1LQ8IYY4 767 aaKnown RBP21.82■■□□□ 1.08
VPS51-216ENST00000534591 MRPL50Q8N5N7 158 aaKnown RBP21.82■■□□□ 1.08
VPS51-216ENST00000534591 PANK1Q8TE04 598 aa21.82■■□□□ 1.08
VPS51-216ENST00000534591 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
VPS51-216ENST00000534591 NOB1Q9ULX3 412 aaKnown RBP21.82■■□□□ 1.08
VPS51-216ENST00000534591 MEGF6O75095 1541 aa21.82■■□□□ 1.08
VPS51-216ENST00000534591 RNMTO43148 476 aaKnown RBP21.81■■□□□ 1.08
VPS51-216ENST00000534591 LGR6Q9HBX8 967 aa21.8■■□□□ 1.08
VPS51-216ENST00000534591 MIS18AQ9NYP9 233 aa21.8■■□□□ 1.08
VPS51-216ENST00000534591 TNS2Q63HR2 1409 aa21.8■■□□□ 1.08
VPS51-216ENST00000534591 ADAMTS7Q9UKP4 1686 aa21.8■■□□□ 1.08
VPS51-216ENST00000534591 TEFQ10587 303 aa21.8■■□□□ 1.08
VPS51-216ENST00000534591 DDB1Q16531 1140 aa21.8■■□□□ 1.08
VPS51-216ENST00000534591 FTSJ3Q8IY81 847 aaKnown RBP21.8■■□□□ 1.08
VPS51-216ENST00000534591 COG6Q9Y2V7 657 aa21.8■■□□□ 1.08
VPS51-216ENST00000534591 PKD1L3Q7Z443 1732 aa21.79■■□□□ 1.08
VPS51-216ENST00000534591 TRIM37O94972 964 aa21.79■■□□□ 1.08
VPS51-216ENST00000534591 RLBP1P12271 317 aa21.79■■□□□ 1.08
VPS51-216ENST00000534591 TRIM27P14373 513 aa21.79■■□□□ 1.08
VPS51-216ENST00000534591 SF3B2Q13435 895 aaKnown RBP21.78■■□□□ 1.08
VPS51-216ENST00000534591 MPRIPQ6WCQ1 1025 aa21.78■■□□□ 1.08
VPS51-216ENST00000534591 FAM196AQ6ZSG2 479 aa21.78■■□□□ 1.08
VPS51-216ENST00000534591 RREB1Q92766 1687 aa21.78■■□□□ 1.08
VPS51-216ENST00000534591 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
VPS51-216ENST00000534591 IFNL2Q8IZJ0 200 aa21.77■■□□□ 1.08
VPS51-216ENST00000534591 VIRMAQ69YN4 1812 aaKnown RBP21.76■■□□□ 1.07
VPS51-216ENST00000534591 PHKG2P15735 406 aa21.76■■□□□ 1.07
VPS51-216ENST00000534591 MVPQ14764 893 aaKnown RBP21.76■■□□□ 1.07
VPS51-216ENST00000534591 MARCH10Q8NA82 808 aaPredicted RBP21.76■■□□□ 1.07
VPS51-216ENST00000534591 CLUAP1Q96AJ1 413 aa21.76■■□□□ 1.07
VPS51-216ENST00000534591 TNNQ9UQP3 1299 aa21.76■■□□□ 1.07
VPS51-216ENST00000534591 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
VPS51-216ENST00000534591 HSP90AB1P08238 724 aaKnown RBP21.75■■□□□ 1.07
VPS51-216ENST00000534591 NUP188Q5SRE5 1749 aa21.75■■□□□ 1.07
VPS51-216ENST00000534591 SRCAPQ6ZRS2 3230 aa21.75■■□□□ 1.07
VPS51-216ENST00000534591 CDCA7Q9BWT1 371 aaPredicted RBP21.75■■□□□ 1.07
VPS51-216ENST00000534591 CHMP4AQ9BY43 222 aa21.75■■□□□ 1.07
VPS51-216ENST00000534591 KDM3BQ7LBC6 1761 aa21.74■■□□□ 1.07
VPS51-216ENST00000534591 EN1Q05925 392 aaPredicted RBP21.74■■□□□ 1.07
VPS51-216ENST00000534591 API5Q9BZZ5 524 aaKnown RBP21.74■■□□□ 1.07
VPS51-216ENST00000534591 NHSQ6T4R5 1651 aa21.73■■□□□ 1.07
VPS51-216ENST00000534591 IL2RBP14784 551 aa21.73■■□□□ 1.07
VPS51-216ENST00000534591 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
VPS51-216ENST00000534591 SCN11AQ9UI33 1791 aa21.73■■□□□ 1.07
VPS51-216ENST00000534591 RGPD3A6NKT7 1758 aaPredicted RBP21.72■■□□□ 1.07
VPS51-216ENST00000534591 RGPD4Q7Z3J3 1758 aa21.72■■□□□ 1.07
VPS51-216ENST00000534591 BTBD11A6QL63 1104 aa21.72■■□□□ 1.07
VPS51-216ENST00000534591 HOXB7P09629 217 aa21.72■■□□□ 1.07
VPS51-216ENST00000534591 DCAF5Q96JK2 942 aa21.72■■□□□ 1.07
VPS51-216ENST00000534591 DDX19BQ9UMR2 479 aa21.72■■□□□ 1.07
VPS51-216ENST00000534591 SIPA1L3O60292 1781 aaPredicted RBP21.72■■□□□ 1.07
VPS51-216ENST00000534591 BAG6P46379 1132 aa21.71■■□□□ 1.07
VPS51-216ENST00000534591 ZCRB1Q8TBF4 217 aaKnown RBP21.71■■□□□ 1.07
VPS51-216ENST00000534591 DOT1LQ8TEK3 1739 aa21.71■■□□□ 1.07
VPS51-216ENST00000534591 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
VPS51-216ENST00000534591 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
VPS51-216ENST00000534591 TCERG1O14776 1098 aaKnown RBP21.7■■□□□ 1.07
VPS51-216ENST00000534591 CYP27B1O15528 508 aa21.7■■□□□ 1.07
VPS51-216ENST00000534591 EIF4A1P60842 406 aaKnown RBP21.7■■□□□ 1.07
VPS51-216ENST00000534591 CCDC30Q5VVM6 783 aa21.7■■□□□ 1.07
VPS51-216ENST00000534591 KDM6AO15550 1401 aaPredicted RBP21.7■■□□□ 1.06
VPS51-216ENST00000534591 BTAF1O14981 1849 aa21.7■■□□□ 1.06
VPS51-216ENST00000534591 PTPRCP08575 1304 aa21.7■■□□□ 1.06
VPS51-216ENST00000534591 EXOC5O00471 708 aa21.7■■□□□ 1.06
VPS51-216ENST00000534591 CHMP4BQ9H444 224 aaKnown RBP21.7■■□□□ 1.06
VPS51-216ENST00000534591 EZH2Q15910 746 aaKnown RBP21.69■■□□□ 1.06
VPS51-216ENST00000534591 CENPQQ7L2Z9 268 aaPredicted RBP21.69■■□□□ 1.06
VPS51-216ENST00000534591 ITPRIPQ8IWB1 547 aa21.69■■□□□ 1.06
VPS51-216ENST00000534591 TMEM57Q8N5G2 664 aa21.69■■□□□ 1.06
VPS51-216ENST00000534591 STK31Q9BXU1 1019 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms