RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PSDA5PKW4 1024 aaPredicted RBP18.63■□□□□ 0.57
VPS11-205ENST00000534551 CABP4P57796 275 aa18.63■□□□□ 0.57
VPS11-205ENST00000534551 DCTN1Q14203 1278 aa18.63■□□□□ 0.57
VPS11-205ENST00000534551 MAPK8IP3Q9UPT6 1336 aa18.63■□□□□ 0.57
VPS11-205ENST00000534551 KCPQ6ZWJ8 1503 aa18.63■□□□□ 0.57
VPS11-205ENST00000534551 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
VPS11-205ENST00000534551 ERVV-2B6SEH9 535 aa18.62■□□□□ 0.57
VPS11-205ENST00000534551 IL17REQ8NFR9 667 aa18.62■□□□□ 0.57
VPS11-205ENST00000534551 ATG3Q9NT62 314 aa18.62■□□□□ 0.57
VPS11-205ENST00000534551 QSER1Q2KHR3 1735 aa18.62■□□□□ 0.57
VPS11-205ENST00000534551 KDM3BQ7LBC6 1761 aa18.62■□□□□ 0.57
VPS11-205ENST00000534551 ZNF831Q5JPB2 1677 aa18.61■□□□□ 0.57
VPS11-205ENST00000534551 SENP3-EIF4A1A0A087X0R7 540 aa18.61■□□□□ 0.57
VPS11-205ENST00000534551 MCM10Q7L590 875 aa18.61■□□□□ 0.57
VPS11-205ENST00000534551 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
VPS11-205ENST00000534551 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
VPS11-205ENST00000534551 UBR3Q6ZT12 1888 aa18.6■□□□□ 0.57
VPS11-205ENST00000534551 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
VPS11-205ENST00000534551 CEMIPQ8WUJ3 1361 aa18.6■□□□□ 0.57
VPS11-205ENST00000534551 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
VPS11-205ENST00000534551 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
VPS11-205ENST00000534551 R3HDM1Q15032 1099 aaKnown RBP18.59■□□□□ 0.57
VPS11-205ENST00000534551 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
VPS11-205ENST00000534551 ZNF827Q17R98 1081 aa18.59■□□□□ 0.57
VPS11-205ENST00000534551 CCNL1Q9UK58 526 aaPredicted RBP18.59■□□□□ 0.57
VPS11-205ENST00000534551 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
VPS11-205ENST00000534551 SLC39A6Q13433 755 aa18.58■□□□□ 0.56
VPS11-205ENST00000534551 NEFMP07197 916 aa18.57■□□□□ 0.56
VPS11-205ENST00000534551 SLC4A9Q96Q91 983 aa18.57■□□□□ 0.56
VPS11-205ENST00000534551 LOC102724428A0A0B4J2F2 783 aa18.56■□□□□ 0.56
VPS11-205ENST00000534551 SIK1P57059 783 aa18.56■□□□□ 0.56
VPS11-205ENST00000534551 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
VPS11-205ENST00000534551 TMPOP42166 694 aaKnown RBP18.55■□□□□ 0.56
VPS11-205ENST00000534551 ITPK1Q13572 414 aa18.55■□□□□ 0.56
VPS11-205ENST00000534551 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
VPS11-205ENST00000534551 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
VPS11-205ENST00000534551 SMARCC1Q92922 1105 aaPredicted RBP18.55■□□□□ 0.56
VPS11-205ENST00000534551 RUNDC1Q96C34 613 aa18.55■□□□□ 0.56
VPS11-205ENST00000534551 C4AP0C0L4 1744 aa18.54■□□□□ 0.56
VPS11-205ENST00000534551 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
VPS11-205ENST00000534551 TEFQ10587 303 aa18.54■□□□□ 0.56
VPS11-205ENST00000534551 SLC27A3Q5K4L6 730 aa18.54■□□□□ 0.56
VPS11-205ENST00000534551 LINC00116Q8NCU8 138 aa18.54■□□□□ 0.56
VPS11-205ENST00000534551 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
VPS11-205ENST00000534551 RBM42Q9BTD8 480 aaKnown RBP18.54■□□□□ 0.56
VPS11-205ENST00000534551 PDGFDQ9GZP0 370 aaPredicted RBP18.54■□□□□ 0.56
VPS11-205ENST00000534551 PNNQ9H307 717 aaKnown RBP18.54■□□□□ 0.56
VPS11-205ENST00000534551 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
VPS11-205ENST00000534551 KCNQ3O43525 872 aa18.53■□□□□ 0.56
VPS11-205ENST00000534551 APAF1O14727 1248 aa18.52■□□□□ 0.56
VPS11-205ENST00000534551 RIPK4P57078 832 aa18.52■□□□□ 0.56
VPS11-205ENST00000534551 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
VPS11-205ENST00000534551 AMIGO3Q86WK7 504 aa18.52■□□□□ 0.56
VPS11-205ENST00000534551 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
VPS11-205ENST00000534551 AKT1S1Q96B36 256 aa18.51■□□□□ 0.55
VPS11-205ENST00000534551 STK32BQ9NY57 414 aa18.51■□□□□ 0.55
VPS11-205ENST00000534551 SRCAPQ6ZRS2 3230 aa18.5■□□□□ 0.55
VPS11-205ENST00000534551 SLC15A2Q16348 729 aa18.5■□□□□ 0.55
VPS11-205ENST00000534551 NBPF14Q5TI25 921 aa18.5■□□□□ 0.55
VPS11-205ENST00000534551 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
VPS11-205ENST00000534551 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
VPS11-205ENST00000534551 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
VPS11-205ENST00000534551 LRP5O75197 1615 aa18.49■□□□□ 0.55
VPS11-205ENST00000534551 BTBD11A6QL63 1104 aa18.48■□□□□ 0.55
VPS11-205ENST00000534551 HTATSF1O43719 755 aaKnown RBP18.48■□□□□ 0.55
VPS11-205ENST00000534551 MIER1Q8N108 512 aa18.48■□□□□ 0.55
VPS11-205ENST00000534551 ZNF790Q6PG37 636 aa18.47■□□□□ 0.55
VPS11-205ENST00000534551 DNAJC10Q8IXB1 793 aa18.47■□□□□ 0.55
VPS11-205ENST00000534551 ZNF496Q96IT1 587 aaPredicted RBP18.47■□□□□ 0.55
VPS11-205ENST00000534551 PNPLA7Q6ZV29 1317 aa18.47■□□□□ 0.55
VPS11-205ENST00000534551 HEG1Q9ULI3 1381 aa18.45■□□□□ 0.54
VPS11-205ENST00000534551 TTC5Q8N0Z6 440 aa18.45■□□□□ 0.54
VPS11-205ENST00000534551 COL24A1Q17RW2 1714 aa18.45■□□□□ 0.54
VPS11-205ENST00000534551 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
VPS11-205ENST00000534551 PHF14O94880 888 aa18.44■□□□□ 0.54
VPS11-205ENST00000534551 AK7Q96M32 723 aa18.44■□□□□ 0.54
VPS11-205ENST00000534551 TFCP2L1Q9NZI6 479 aa18.44■□□□□ 0.54
VPS11-205ENST00000534551 GNPATO15228 680 aa18.43■□□□□ 0.54
VPS11-205ENST00000534551 LMOD3Q0VAK6 560 aa18.43■□□□□ 0.54
VPS11-205ENST00000534551 ZBTB7AO95365 584 aa18.42■□□□□ 0.54
VPS11-205ENST00000534551 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
VPS11-205ENST00000534551 SALL2Q9Y467 1007 aaPredicted RBP18.42■□□□□ 0.54
VPS11-205ENST00000534551 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
VPS11-205ENST00000534551 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
VPS11-205ENST00000534551 CRKLP46109 303 aaKnown RBP18.41■□□□□ 0.54
VPS11-205ENST00000534551 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
VPS11-205ENST00000534551 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
VPS11-205ENST00000534551 TSPYL4Q9UJ04 414 aa18.4■□□□□ 0.54
VPS11-205ENST00000534551 SCN7AQ01118 1682 aa18.4■□□□□ 0.54
VPS11-205ENST00000534551 ZBTB1Q9Y2K1 713 aa18.39■□□□□ 0.53
VPS11-205ENST00000534551 LAS1LQ9Y4W2 734 aaKnown RBP18.39■□□□□ 0.53
VPS11-205ENST00000534551 BCORQ6W2J9 1755 aa18.39■□□□□ 0.53
VPS11-205ENST00000534551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.38■□□□□ 0.53
VPS11-205ENST00000534551 CYP19A1P11511 503 aaPredicted RBP18.38■□□□□ 0.53
VPS11-205ENST00000534551 KRT24Q2M2I5 525 aa18.38■□□□□ 0.53
VPS11-205ENST00000534551 INTS5Q6P9B9 1019 aaKnown RBP18.38■□□□□ 0.53
VPS11-205ENST00000534551 MSH5O43196 834 aa18.37■□□□□ 0.53
VPS11-205ENST00000534551 PIP4K2AP48426 406 aaPredicted RBP18.37■□□□□ 0.53
VPS11-205ENST00000534551 MSL1Q68DK7 614 aa18.37■□□□□ 0.53
VPS11-205ENST00000534551 ATF5Q9Y2D1 282 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms