RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 MYBBP1AQ9BQG0 1328 aaKnown RBP21.53■■□□□ 1.04
CHD7-204ENST00000526846 PRKAR2BP31323 418 aa21.52■■□□□ 1.04
CHD7-204ENST00000526846 PHACTR3Q96KR7 559 aa21.52■■□□□ 1.04
CHD7-204ENST00000526846 ATG3Q9NT62 314 aa21.52■■□□□ 1.04
CHD7-204ENST00000526846 TJP1Q07157 1748 aa21.52■■□□□ 1.03
CHD7-204ENST00000526846 U2AF1L5P0DN76 240 aaPredicted RBP21.51■■□□□ 1.03
CHD7-204ENST00000526846 U2AF1Q01081 240 aaKnown RBP eCLIP21.51■■□□□ 1.03
CHD7-204ENST00000526846 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
CHD7-204ENST00000526846 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
CHD7-204ENST00000526846 FCHSD2O94868 740 aa21.5■■□□□ 1.03
CHD7-204ENST00000526846 MAP3K5Q99683 1374 aa21.49■■□□□ 1.03
CHD7-204ENST00000526846 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
CHD7-204ENST00000526846 CABP4P57796 275 aa21.48■■□□□ 1.03
CHD7-204ENST00000526846 GAS2L2Q8NHY3 880 aa21.48■■□□□ 1.03
CHD7-204ENST00000526846 MYH14Q7Z406 1995 aaKnown RBP21.48■■□□□ 1.03
CHD7-204ENST00000526846 LOC102724428A0A0B4J2F2 783 aa21.47■■□□□ 1.03
CHD7-204ENST00000526846 SIK1P57059 783 aa21.47■■□□□ 1.03
CHD7-204ENST00000526846 NFATC2IPQ8NCF5 419 aa21.47■■□□□ 1.03
CHD7-204ENST00000526846 SLC4A9Q96Q91 983 aa21.47■■□□□ 1.03
CHD7-204ENST00000526846 SLC52A2Q9HAB3 445 aa21.47■■□□□ 1.03
CHD7-204ENST00000526846 PNPLA7Q6ZV29 1317 aa21.46■■□□□ 1.03
CHD7-204ENST00000526846 CEMIPQ8WUJ3 1361 aa21.46■■□□□ 1.03
CHD7-204ENST00000526846 KCPQ6ZWJ8 1503 aa21.45■■□□□ 1.02
CHD7-204ENST00000526846 ITPK1Q13572 414 aa21.45■■□□□ 1.02
CHD7-204ENST00000526846 PLEKHF1Q96S99 279 aa21.45■■□□□ 1.02
CHD7-204ENST00000526846 GNAT3A8MTJ3 354 aa21.44■■□□□ 1.02
CHD7-204ENST00000526846 IL17REQ8NFR9 667 aa21.44■■□□□ 1.02
CHD7-204ENST00000526846 LINC00116Q8NCU8 138 aa21.43■■□□□ 1.02
CHD7-204ENST00000526846 ATP6V1AP38606 617 aa21.4■■□□□ 1.02
CHD7-204ENST00000526846 AMIGO3Q86WK7 504 aa21.4■■□□□ 1.02
CHD7-204ENST00000526846 TFCP2L1Q9NZI6 479 aa21.4■■□□□ 1.02
CHD7-204ENST00000526846 C4AP0C0L4 1744 aa21.39■■□□□ 1.01
CHD7-204ENST00000526846 ZBTB7AO95365 584 aa21.39■■□□□ 1.01
CHD7-204ENST00000526846 PTGER2P43116 358 aa21.39■■□□□ 1.01
CHD7-204ENST00000526846 SGIP1Q9BQI5 828 aa21.39■■□□□ 1.01
CHD7-204ENST00000526846 SPON1Q9HCB6 807 aa21.39■■□□□ 1.01
CHD7-204ENST00000526846 HMGB2P26583 209 aaKnown RBP21.38■■□□□ 1.01
CHD7-204ENST00000526846 RBM42Q9BTD8 480 aaKnown RBP21.38■■□□□ 1.01
CHD7-204ENST00000526846 MTFR1LQ9H019 292 aa21.38■■□□□ 1.01
CHD7-204ENST00000526846 SLC39A6Q13433 755 aa21.37■■□□□ 1.01
CHD7-204ENST00000526846 KDM3BQ7LBC6 1761 aa21.37■■□□□ 1.01
CHD7-204ENST00000526846 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
CHD7-204ENST00000526846 COL23A1Q86Y22 540 aaPredicted RBP21.36■■□□□ 1.01
CHD7-204ENST00000526846 SLC16A10Q8TF71 515 aa21.35■■□□□ 1.01
CHD7-204ENST00000526846 CNTNAP4Q9C0A0 1308 aa21.34■■□□□ 1.01
CHD7-204ENST00000526846 HTATSF1O43719 755 aaKnown RBP21.34■■□□□ 1.01
CHD7-204ENST00000526846 AK7Q96M32 723 aa21.34■■□□□ 1.01
CHD7-204ENST00000526846 ATF5Q9Y2D1 282 aaPredicted RBP21.34■■□□□ 1.01
CHD7-204ENST00000526846 TEFQ10587 303 aa21.33■■□□□ 1.01
CHD7-204ENST00000526846 NFE2L2Q16236 605 aa21.33■■□□□ 1.01
CHD7-204ENST00000526846 SMIM5Q71RC9 77 aa21.33■■□□□ 1.01
CHD7-204ENST00000526846 MCM10Q7L590 875 aa21.33■■□□□ 1.01
CHD7-204ENST00000526846 DCTN1Q14203 1278 aa21.32■■□□□ 1
CHD7-204ENST00000526846 RC3H1Q5TC82 1133 aaKnown RBP21.32■■□□□ 1
CHD7-204ENST00000526846 PNNQ9H307 717 aaKnown RBP21.32■■□□□ 1
CHD7-204ENST00000526846 SSFA2P28290 1259 aa21.31■■□□□ 1
CHD7-204ENST00000526846 FLAD1Q8NFF5 587 aa21.31■■□□□ 1
CHD7-204ENST00000526846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.3■■□□□ 1
CHD7-204ENST00000526846 GNPATO15228 680 aa21.3■■□□□ 1
CHD7-204ENST00000526846 CCDC184Q52MB2 194 aa21.3■■□□□ 1
CHD7-204ENST00000526846 ZNF790Q6PG37 636 aa21.3■■□□□ 1
CHD7-204ENST00000526846 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
CHD7-204ENST00000526846 MAPK8IP3Q9UPT6 1336 aa21.29■■□□□ 1
CHD7-204ENST00000526846 NEFMP07197 916 aa21.29■■□□□ 1
CHD7-204ENST00000526846 DNAJC10Q8IXB1 793 aa21.29■■□□□ 1
CHD7-204ENST00000526846 VSIG10Q8N0Z9 540 aa21.29■■□□□ 1
CHD7-204ENST00000526846 RTF1Q92541 710 aaKnown RBP21.29■■□□□ 1
CHD7-204ENST00000526846 LAMB4A4D0S4 1761 aa21.28■■□□□ 1
CHD7-204ENST00000526846 CRKLP46109 303 aaKnown RBP21.28■■□□□ 1
CHD7-204ENST00000526846 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
CHD7-204ENST00000526846 HEG1Q9ULI3 1381 aa21.27■■□□□ 1
CHD7-204ENST00000526846 KCNQ3O43525 872 aa21.27■■□□□ 1
CHD7-204ENST00000526846 PHF14O94880 888 aa21.27■■□□□ 1
CHD7-204ENST00000526846 WDR43Q15061 677 aaKnown RBP eCLIP21.27■■□□□ 1
CHD7-204ENST00000526846 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
CHD7-204ENST00000526846 CYP19A1P11511 503 aaPredicted RBP21.26■□□□□ 0.99
CHD7-204ENST00000526846 TMPOP42166 694 aaKnown RBP21.26■□□□□ 0.99
CHD7-204ENST00000526846 INTS5Q6P9B9 1019 aaKnown RBP21.26■□□□□ 0.99
CHD7-204ENST00000526846 CCDC146Q8IYE0 955 aa21.26■□□□□ 0.99
CHD7-204ENST00000526846 BTBD11A6QL63 1104 aa21.25■□□□□ 0.99
CHD7-204ENST00000526846 TTC5Q8N0Z6 440 aa21.25■□□□□ 0.99
CHD7-204ENST00000526846 RUNDC1Q96C34 613 aa21.25■□□□□ 0.99
CHD7-204ENST00000526846 MSH5O43196 834 aa21.24■□□□□ 0.99
CHD7-204ENST00000526846 THUMPD2Q9BTF0 503 aaKnown RBP21.24■□□□□ 0.99
CHD7-204ENST00000526846 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
CHD7-204ENST00000526846 ANP32CO43423 234 aa21.23■□□□□ 0.99
CHD7-204ENST00000526846 ADRA2BP18089 450 aa21.23■□□□□ 0.99
CHD7-204ENST00000526846 TAF7Q15545 349 aaPredicted RBP21.23■□□□□ 0.99
CHD7-204ENST00000526846 PPP1R1BQ9UD71 204 aaPredicted RBP21.23■□□□□ 0.99
CHD7-204ENST00000526846 RIPK4P57078 832 aa21.22■□□□□ 0.99
CHD7-204ENST00000526846 MSL1Q68DK7 614 aa21.22■□□□□ 0.99
CHD7-204ENST00000526846 FMNL2Q96PY5 1086 aa21.22■□□□□ 0.99
CHD7-204ENST00000526846 ARXQ96QS3 562 aa21.22■□□□□ 0.99
CHD7-204ENST00000526846 CCDC87Q9NVE4 849 aa21.22■□□□□ 0.99
CHD7-204ENST00000526846 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
CHD7-204ENST00000526846 ARHGEF1Q92888 912 aaKnown RBP21.21■□□□□ 0.99
CHD7-204ENST00000526846 KIF13BQ9NQT8 1826 aa21.2■□□□□ 0.98
CHD7-204ENST00000526846 TRAPPC3LQ5T215 181 aa21.2■□□□□ 0.98
CHD7-204ENST00000526846 ZBTB1Q9Y2K1 713 aa21.2■□□□□ 0.98
CHD7-204ENST00000526846 SCN7AQ01118 1682 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms