RNA–Protein interactions for RNA: ENST00000526494.5

CAPRIN1-204, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-204ENST00000526494 ELL2O00472 640 aaPredicted RBP20.47■□□□□ 0.87
CAPRIN1-204ENST00000526494 ADAMTS7Q9UKP4 1686 aa20.46■□□□□ 0.87
CAPRIN1-204ENST00000526494 ONECUT3O60422 494 aaPredicted RBP20.46■□□□□ 0.87
CAPRIN1-204ENST00000526494 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
CAPRIN1-204ENST00000526494 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
CAPRIN1-204ENST00000526494 SEPT12Q8IYM1 358 aa20.46■□□□□ 0.87
CAPRIN1-204ENST00000526494 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
CAPRIN1-204ENST00000526494 WNK3Q9BYP7 1800 aa20.46■□□□□ 0.87
CAPRIN1-204ENST00000526494 MRC1P22897 1456 aa20.45■□□□□ 0.86
CAPRIN1-204ENST00000526494 KCNQ3O43525 872 aa20.45■□□□□ 0.86
CAPRIN1-204ENST00000526494 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
CAPRIN1-204ENST00000526494 RBM6P78332 1123 aaKnown RBP20.44■□□□□ 0.86
CAPRIN1-204ENST00000526494 SHANK3Q9BYB0 1731 aa20.44■□□□□ 0.86
CAPRIN1-204ENST00000526494 VAMP4O75379 141 aa20.43■□□□□ 0.86
CAPRIN1-204ENST00000526494 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
CAPRIN1-204ENST00000526494 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
CAPRIN1-204ENST00000526494 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
CAPRIN1-204ENST00000526494 ZNF790Q6PG37 636 aa20.42■□□□□ 0.86
CAPRIN1-204ENST00000526494 TTC5Q8N0Z6 440 aa20.42■□□□□ 0.86
CAPRIN1-204ENST00000526494 SYTL4Q96C24 671 aaPredicted RBP20.42■□□□□ 0.86
CAPRIN1-204ENST00000526494 THSD7AQ9UPZ6 1657 aa20.42■□□□□ 0.86
CAPRIN1-204ENST00000526494 PRIM1P49642 420 aaKnown RBP20.41■□□□□ 0.86
CAPRIN1-204ENST00000526494 ZNF428Q96B54 188 aa20.41■□□□□ 0.86
CAPRIN1-204ENST00000526494 BCAR3O75815 825 aa20.4■□□□□ 0.86
CAPRIN1-204ENST00000526494 RXRBP28702 533 aa20.4■□□□□ 0.86
CAPRIN1-204ENST00000526494 ACSBG1Q96GR2 724 aa20.4■□□□□ 0.86
CAPRIN1-204ENST00000526494 BCL2L13Q9BXK5 485 aa20.4■□□□□ 0.86
CAPRIN1-204ENST00000526494 SMC4Q9NTJ3 1288 aa20.4■□□□□ 0.86
CAPRIN1-204ENST00000526494 NEFLP07196 543 aa20.39■□□□□ 0.85
CAPRIN1-204ENST00000526494 RRP1P56182 461 aaKnown RBP20.39■□□□□ 0.85
CAPRIN1-204ENST00000526494 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.85
CAPRIN1-204ENST00000526494 PIGBQ92521 554 aa20.39■□□□□ 0.85
CAPRIN1-204ENST00000526494 SOS1Q07889 1333 aaPredicted RBP20.38■□□□□ 0.85
CAPRIN1-204ENST00000526494 RGS17Q9UGC6 210 aaPredicted RBP20.38■□□□□ 0.85
CAPRIN1-204ENST00000526494 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
CAPRIN1-204ENST00000526494 RNF123Q5XPI4 1314 aa20.37■□□□□ 0.85
CAPRIN1-204ENST00000526494 TCERG1O14776 1098 aaKnown RBP20.37■□□□□ 0.85
CAPRIN1-204ENST00000526494 ALDH1L2Q3SY69 923 aa20.37■□□□□ 0.85
CAPRIN1-204ENST00000526494 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.37■□□□□ 0.85
CAPRIN1-204ENST00000526494 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
CAPRIN1-204ENST00000526494 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
CAPRIN1-204ENST00000526494 FAM182BQ5T319 152 aa20.36■□□□□ 0.85
CAPRIN1-204ENST00000526494 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
CAPRIN1-204ENST00000526494 BCL9O00512 1426 aa20.36■□□□□ 0.85
CAPRIN1-204ENST00000526494 HOXB7P09629 217 aa20.35■□□□□ 0.85
CAPRIN1-204ENST00000526494 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
CAPRIN1-204ENST00000526494 KRT27Q7Z3Y8 459 aa20.35■□□□□ 0.85
CAPRIN1-204ENST00000526494 TOGARAM1Q9Y4F4 1720 aa20.34■□□□□ 0.85
CAPRIN1-204ENST00000526494 PLIN1O60240 522 aa20.34■□□□□ 0.85
CAPRIN1-204ENST00000526494 GIGYF1O75420 1035 aaPredicted RBP20.34■□□□□ 0.85
CAPRIN1-204ENST00000526494 HDGFL1Q5TGJ6 251 aa20.34■□□□□ 0.85
CAPRIN1-204ENST00000526494 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
CAPRIN1-204ENST00000526494 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
CAPRIN1-204ENST00000526494 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
CAPRIN1-204ENST00000526494 PTCD1O75127 700 aaKnown RBP20.33■□□□□ 0.85
CAPRIN1-204ENST00000526494 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.85
CAPRIN1-204ENST00000526494 IRX6P78412 446 aaPredicted RBP20.33■□□□□ 0.85
CAPRIN1-204ENST00000526494 CCDC30Q5VVM6 783 aa20.33■□□□□ 0.85
CAPRIN1-204ENST00000526494 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.85
CAPRIN1-204ENST00000526494 NECTIN2Q92692 538 aa20.33■□□□□ 0.85
CAPRIN1-204ENST00000526494 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
CAPRIN1-204ENST00000526494 SIPA1L3O60292 1781 aaPredicted RBP20.33■□□□□ 0.84
CAPRIN1-204ENST00000526494 KDM3BQ7LBC6 1761 aa20.33■□□□□ 0.84
CAPRIN1-204ENST00000526494 HEG1Q9ULI3 1381 aa20.33■□□□□ 0.84
CAPRIN1-204ENST00000526494 KCNQ2O43526 872 aa20.32■□□□□ 0.84
CAPRIN1-204ENST00000526494 SNRPA1P09661 255 aaKnown RBP20.32■□□□□ 0.84
CAPRIN1-204ENST00000526494 STK31Q9BXU1 1019 aa20.32■□□□□ 0.84
CAPRIN1-204ENST00000526494 KIF16BQ96L93 1317 aa20.3■□□□□ 0.84
CAPRIN1-204ENST00000526494 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
CAPRIN1-204ENST00000526494 RBM42Q9BTD8 480 aaKnown RBP20.3■□□□□ 0.84
CAPRIN1-204ENST00000526494 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
CAPRIN1-204ENST00000526494 DOT1LQ8TEK3 1739 aa20.28■□□□□ 0.84
CAPRIN1-204ENST00000526494 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
CAPRIN1-204ENST00000526494 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
CAPRIN1-204ENST00000526494 BRPF1P55201 1214 aaPredicted RBP20.28■□□□□ 0.84
CAPRIN1-204ENST00000526494 FKBP8Q14318 412 aa20.28■□□□□ 0.84
CAPRIN1-204ENST00000526494 ZKSCAN2Q63HK3 967 aa20.28■□□□□ 0.84
CAPRIN1-204ENST00000526494 FAM196AQ6ZSG2 479 aa20.28■□□□□ 0.84
CAPRIN1-204ENST00000526494 SMARCC1Q92922 1105 aaPredicted RBP20.28■□□□□ 0.84
CAPRIN1-204ENST00000526494 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.84
CAPRIN1-204ENST00000526494 GTF3C3Q9Y5Q9 886 aa20.27■□□□□ 0.84
CAPRIN1-204ENST00000526494 RGS12O14924 1447 aa20.27■□□□□ 0.83
CAPRIN1-204ENST00000526494 CHPF2Q9P2E5 772 aa20.26■□□□□ 0.83
CAPRIN1-204ENST00000526494 PTF1AQ7RTS3 328 aa20.25■□□□□ 0.83
CAPRIN1-204ENST00000526494 VSIG10Q8N0Z9 540 aa20.25■□□□□ 0.83
CAPRIN1-204ENST00000526494 USP16Q9Y5T5 823 aa20.25■□□□□ 0.83
CAPRIN1-204ENST00000526494 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
CAPRIN1-204ENST00000526494 PAPPAQ13219 1627 aa20.24■□□□□ 0.83
CAPRIN1-204ENST00000526494 PALLDQ8WX93 1383 aa20.24■□□□□ 0.83
CAPRIN1-204ENST00000526494 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
CAPRIN1-204ENST00000526494 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
CAPRIN1-204ENST00000526494 TEX13AQ9BXU3 409 aaPredicted RBP20.24■□□□□ 0.83
CAPRIN1-204ENST00000526494 DBF4Q9UBU7 674 aaPredicted RBP20.24■□□□□ 0.83
CAPRIN1-204ENST00000526494 MS4A1P11836 297 aa20.23■□□□□ 0.83
CAPRIN1-204ENST00000526494 G2E3Q7L622 706 aa20.23■□□□□ 0.83
CAPRIN1-204ENST00000526494 DNAJC10Q8IXB1 793 aa20.23■□□□□ 0.83
CAPRIN1-204ENST00000526494 BCL11BQ9C0K0 894 aaPredicted RBP20.23■□□□□ 0.83
CAPRIN1-204ENST00000526494 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
CAPRIN1-204ENST00000526494 FTSJ3Q8IY81 847 aaKnown RBP20.22■□□□□ 0.83
CAPRIN1-204ENST00000526494 ARHGAP45Q92619 1136 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms