RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 C5P01031 1676 aa17.24■□□□□ 0.35
CTSB-209ENST00000525315 ZNF831Q5JPB2 1677 aa17.24■□□□□ 0.35
CTSB-209ENST00000525315 DLG5Q8TDM6 1919 aa17.24■□□□□ 0.35
CTSB-209ENST00000525315 IL17REQ8NFR9 667 aa17.24■□□□□ 0.35
CTSB-209ENST00000525315 PNNQ9H307 717 aaKnown RBP17.24■□□□□ 0.35
CTSB-209ENST00000525315 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
CTSB-209ENST00000525315 CASZ1Q86V15 1759 aa17.23■□□□□ 0.35
CTSB-209ENST00000525315 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
CTSB-209ENST00000525315 SIK1P57059 783 aa17.23■□□□□ 0.35
CTSB-209ENST00000525315 ZNF827Q17R98 1081 aa17.23■□□□□ 0.35
CTSB-209ENST00000525315 MRC1P22897 1456 aa17.23■□□□□ 0.35
CTSB-209ENST00000525315 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
CTSB-209ENST00000525315 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
CTSB-209ENST00000525315 HTATSF1O43719 755 aaKnown RBP17.21■□□□□ 0.35
CTSB-209ENST00000525315 SRCAPQ6ZRS2 3230 aa17.2■□□□□ 0.34
CTSB-209ENST00000525315 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
CTSB-209ENST00000525315 SLC4A9Q96Q91 983 aa17.2■□□□□ 0.34
CTSB-209ENST00000525315 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
CTSB-209ENST00000525315 LRP5O75197 1615 aa17.19■□□□□ 0.34
CTSB-209ENST00000525315 NEFMP07197 916 aa17.19■□□□□ 0.34
CTSB-209ENST00000525315 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
CTSB-209ENST00000525315 C4BP0C0L5 1744 aa17.18■□□□□ 0.34
CTSB-209ENST00000525315 ITPK1Q13572 414 aa17.18■□□□□ 0.34
CTSB-209ENST00000525315 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
CTSB-209ENST00000525315 TFCP2L1Q9NZI6 479 aa17.18■□□□□ 0.34
CTSB-209ENST00000525315 UBR3Q6ZT12 1888 aa17.17■□□□□ 0.34
CTSB-209ENST00000525315 LINC00116Q8NCU8 138 aa17.17■□□□□ 0.34
CTSB-209ENST00000525315 PNPLA7Q6ZV29 1317 aa17.17■□□□□ 0.34
CTSB-209ENST00000525315 COL5A3P25940 1745 aaPredicted RBP17.16■□□□□ 0.34
CTSB-209ENST00000525315 ANP32CO43423 234 aa17.16■□□□□ 0.34
CTSB-209ENST00000525315 TEFQ10587 303 aa17.16■□□□□ 0.34
CTSB-209ENST00000525315 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
CTSB-209ENST00000525315 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
CTSB-209ENST00000525315 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
CTSB-209ENST00000525315 ADAMTS8Q9UP79 889 aa17.16■□□□□ 0.34
CTSB-209ENST00000525315 MYH14Q7Z406 1995 aaKnown RBP17.16■□□□□ 0.34
CTSB-209ENST00000525315 UBR2Q8IWV8 1755 aa17.15■□□□□ 0.34
CTSB-209ENST00000525315 CICQ96RK0 1608 aaPredicted RBP17.15■□□□□ 0.34
CTSB-209ENST00000525315 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
CTSB-209ENST00000525315 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTSB-209ENST00000525315 SPON1Q9HCB6 807 aa17.15■□□□□ 0.34
CTSB-209ENST00000525315 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
CTSB-209ENST00000525315 RC3H1Q5TC82 1133 aaKnown RBP17.14■□□□□ 0.33
CTSB-209ENST00000525315 MCM10Q7L590 875 aa17.14■□□□□ 0.33
CTSB-209ENST00000525315 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
CTSB-209ENST00000525315 MAPK8IP3Q9UPT6 1336 aa17.14■□□□□ 0.33
CTSB-209ENST00000525315 TJP1Q07157 1748 aa17.13■□□□□ 0.33
CTSB-209ENST00000525315 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
CTSB-209ENST00000525315 KCPQ6ZWJ8 1503 aa17.13■□□□□ 0.33
CTSB-209ENST00000525315 DCTN1Q14203 1278 aa17.13■□□□□ 0.33
CTSB-209ENST00000525315 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
CTSB-209ENST00000525315 FLAD1Q8NFF5 587 aa17.13■□□□□ 0.33
CTSB-209ENST00000525315 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
CTSB-209ENST00000525315 ZBTB7AO95365 584 aa17.12■□□□□ 0.33
CTSB-209ENST00000525315 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
CTSB-209ENST00000525315 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
CTSB-209ENST00000525315 AK7Q96M32 723 aa17.12■□□□□ 0.33
CTSB-209ENST00000525315 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
CTSB-209ENST00000525315 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
CTSB-209ENST00000525315 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
CTSB-209ENST00000525315 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
CTSB-209ENST00000525315 RIPK4P57078 832 aa17.1■□□□□ 0.33
CTSB-209ENST00000525315 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
CTSB-209ENST00000525315 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
CTSB-209ENST00000525315 TTC5Q8N0Z6 440 aa17.1■□□□□ 0.33
CTSB-209ENST00000525315 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
CTSB-209ENST00000525315 CNTNAP4Q9C0A0 1308 aa17.1■□□□□ 0.33
CTSB-209ENST00000525315 SSFA2P28290 1259 aa17.09■□□□□ 0.33
CTSB-209ENST00000525315 PTGER2P43116 358 aa17.09■□□□□ 0.33
CTSB-209ENST00000525315 SGIP1Q9BQI5 828 aa17.09■□□□□ 0.33
CTSB-209ENST00000525315 KCNQ3O43525 872 aa17.08■□□□□ 0.32
CTSB-209ENST00000525315 RPS6KA4O75676 772 aa17.08■□□□□ 0.32
CTSB-209ENST00000525315 DNAJC10Q8IXB1 793 aa17.08■□□□□ 0.32
CTSB-209ENST00000525315 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.32
CTSB-209ENST00000525315 ZNF496Q96IT1 587 aaPredicted RBP17.08■□□□□ 0.32
CTSB-209ENST00000525315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.07■□□□□ 0.32
CTSB-209ENST00000525315 GNPATO15228 680 aa17.07■□□□□ 0.32
CTSB-209ENST00000525315 CYP19A1P11511 503 aaPredicted RBP17.07■□□□□ 0.32
CTSB-209ENST00000525315 CRKLP46109 303 aaKnown RBP17.07■□□□□ 0.32
CTSB-209ENST00000525315 INTS5Q6P9B9 1019 aaKnown RBP17.07■□□□□ 0.32
CTSB-209ENST00000525315 SMIM5Q71RC9 77 aa17.07■□□□□ 0.32
CTSB-209ENST00000525315 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
CTSB-209ENST00000525315 HEG1Q9ULI3 1381 aa17.06■□□□□ 0.32
CTSB-209ENST00000525315 MSH5O43196 834 aa17.06■□□□□ 0.32
CTSB-209ENST00000525315 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
CTSB-209ENST00000525315 TEX13AQ9BXU3 409 aaPredicted RBP17.06■□□□□ 0.32
CTSB-209ENST00000525315 KDM3BQ7LBC6 1761 aa17.05■□□□□ 0.32
CTSB-209ENST00000525315 ADRA2BP18089 450 aa17.05■□□□□ 0.32
CTSB-209ENST00000525315 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
CTSB-209ENST00000525315 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
CTSB-209ENST00000525315 THUMPD2Q9BTF0 503 aaKnown RBP17.05■□□□□ 0.32
CTSB-209ENST00000525315 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
CTSB-209ENST00000525315 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
CTSB-209ENST00000525315 PHF14O94880 888 aa17.04■□□□□ 0.32
CTSB-209ENST00000525315 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
CTSB-209ENST00000525315 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
CTSB-209ENST00000525315 RRP7AQ9Y3A4 280 aaKnown RBP17.04■□□□□ 0.32
CTSB-209ENST00000525315 NEUROD2Q15784 382 aa17.03■□□□□ 0.32
CTSB-209ENST00000525315 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
CTSB-209ENST00000525315 APAF1O14727 1248 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms