RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	RSPH14	Q9UHP6	348 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	UNC13B	O14795	1591 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	ADGRL1	O94910	1474 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	SARNP	P82979	210 aa	Known RBP	4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	TPRN	Q4KMQ1	711 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	KIAA1524	Q8TCG1	905 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	BAG4	O95429	457 aa	Known RBP	4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	HNRNPH2	P55795	449 aa	Known RBP	4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	TPM4	P67936	248 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	PSME1	Q06323	249 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	BMS1	Q14692	1282 aa	Known RBP	4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	NOL10	Q9BSC4	688 aa	Known RBP	4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	ZNF446	Q9NWS9	450 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	TRAK1	Q9UPV9	953 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	ABCA8	O94911	1581 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	SYNJ2	O15056	1496 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	SEC24B	O95487	1268 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	CCDC30	Q5VVM6	783 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	SRL	Q86TD4	932 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	GPATCH11	Q8N954	259 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	TMEM87A	Q8NBN3	555 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	ZNF592	Q92610	1267 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	SGSM3	Q96HU1	749 aa		4.6	□□□□□ -1.67
FAM49B-225	ENST00000523288	ELP1	O95163	1332 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	NFATC2IP	Q8NCF5	419 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	FBXO18	Q8NFZ0	1043 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	IL17RA	Q96F46	866 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	JRKL	Q9Y4A0	524 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	ABCA9	Q8IUA7	1624 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	CDK13	Q14004	1512 aa	Known RBP	4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	RIOK3	O14730	519 aa	Known RBP	4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	CDC25B	P30305	580 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	ATP6V1A	P38606	617 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	TDO2	P48775	406 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	SNRNP27	Q8WVK2	155 aa	Known RBP	4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	SYAP1	Q96A49	352 aa	Predicted RBP	4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	FAM107B	Q9H098	131 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	GZF1	Q9H116	711 aa	Predicted RBP	4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	TSPY26P	Q9H489	355 aa		4.59	□□□□□ -1.67
FAM49B-225	ENST00000523288	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.59	□□□□□ -1.68
FAM49B-225	ENST00000523288	TNNT3	P45378	269 aa	Predicted RBP	4.59	□□□□□ -1.68
FAM49B-225	ENST00000523288	ANAPC15	P60006	121 aa		4.59	□□□□□ -1.68
FAM49B-225	ENST00000523288	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.59	□□□□□ -1.68	1e-8	■■■□□ 18.4
FAM49B-225	ENST00000523288	SLFN5	Q08AF3	891 aa		4.59	□□□□□ -1.68
FAM49B-225	ENST00000523288	SEMA3F	Q13275	785 aa		4.59	□□□□□ -1.68
FAM49B-225	ENST00000523288	TTC31	Q49AM3	519 aa	Predicted RBP	4.59	□□□□□ -1.68
FAM49B-225	ENST00000523288	LRCH2	Q5VUJ6	765 aa		4.59	□□□□□ -1.68
FAM49B-225	ENST00000523288		K7ELQ4	463 aa	Predicted RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	GORAB	Q5T7V8	394 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	PPM1E	Q8WY54	764 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	CLUAP1	Q96AJ1	413 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	BORCS6	Q96GS4	357 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	MAP3K4	Q9Y6R4	1608 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288		E9PSI1	815 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	KIF2A	O00139	706 aa	Predicted RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	MYO1C	O00159	1063 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	H2AFX	P16104	143 aa	Predicted RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	MAPK8IP2	Q13387	824 aa	Predicted RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	C20orf194	Q5TEA3	1177 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	MMS22L	Q6ZRQ5	1243 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	PROSER2	Q86WR7	435 aa	Predicted RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	ERO1A	Q96HE7	468 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	LARP6	Q9BRS8	491 aa	Known RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	HDAC1	Q13547	482 aa	Predicted RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	TSHZ1	Q6ZSZ6	1077 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	RNF217	Q8TC41	542 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	EXOC4	Q96A65	974 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	PAIP2	Q9BPZ3	127 aa	Known RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	DEF6	Q9H4E7	631 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	TPM1	P09493	284 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	CD151	P48509	253 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	CDC37	Q16543	378 aa	Predicted RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	CCDC96	Q2M329	555 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	MKRN1	Q9UHC7	482 aa	Known RBP	4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	MRVI1	Q9Y6F6	885 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	ARHGEF5	Q12774	1597 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	MAST1	Q9Y2H9	1570 aa		4.58	□□□□□ -1.68
FAM49B-225	ENST00000523288	PDLIM1	O00151	329 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	APBB1	O00213	710 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	DDR1	Q08345	913 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	GPS2	Q13227	327 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	DHX8	Q14562	1220 aa	Known RBP	4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	ZRSR1	Q15695	479 aa	Known RBP	4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	JAKMIP3	Q5VZ66	844 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	SPDYE4	A6NLX3	237 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	LSM14A	Q8ND56	463 aa	Known RBP	4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	CASZ1	Q86V15	1759 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	KIAA0556	O60303	1618 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	CCDC171	Q6TFL3	1326 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	NEMF	O60524	1076 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	IGHD	P01880	384 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	CHML	P26374	656 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	USP8	P40818	1118 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	EFCAB13	Q8IY85	973 aa		4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	ERCC4	Q92889	916 aa	Predicted RBP	4.57	□□□□□ -1.68
FAM49B-225	ENST00000523288	PRR29	P0C7W0	189 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms