RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-225ENST00000523288 PELP1Q8IZL8 1130 aaKnown RBP7.01□□□□□ -1.29
FAM49B-225ENST00000523288 MYT1Q01538 1121 aa6.97□□□□□ -1.29
FAM49B-225ENST00000523288 TTBK1Q5TCY1 1321 aaPredicted RBP6.76□□□□□ -1.33
FAM49B-225ENST00000523288 NISCHQ9Y2I1 1504 aa6.76□□□□□ -1.33
FAM49B-225ENST00000523288 CHIC1Q5VXU3 224 aa6.64□□□□□ -1.35
FAM49B-225ENST00000523288 DCAF8L2P0C7V8 631 aa6.61□□□□□ -1.35
FAM49B-225ENST00000523288 HRCP23327 699 aa6.48□□□□□ -1.37
FAM49B-225ENST00000523288 CCDC180Q9P1Z9 1646 aa6.38□□□□□ -1.39
FAM49B-225ENST00000523288 DCAF1Q9Y4B6 1507 aa6.23□□□□□ -1.41
FAM49B-225ENST00000523288 ERICH6Q7L0X2 663 aa6.22□□□□□ -1.41
FAM49B-225ENST00000523288 APLP2Q06481 763 aa6.2□□□□□ -1.42
FAM49B-225ENST00000523288 SCAF1Q9H7N4 1312 aaKnown RBP6.18□□□□□ -1.42
FAM49B-225ENST00000523288 ZEB1P37275 1124 aaPredicted RBP6.14□□□□□ -1.43
FAM49B-225ENST00000523288 MYO15BQ96JP2 1530 aa6.11□□□□□ -1.43
FAM49B-225ENST00000523288 PRKCSHP14314 528 aaPredicted RBP6.09□□□□□ -1.44
FAM49B-225ENST00000523288 ACIN1Q9UKV3 1341 aaKnown RBP6.03□□□□□ -1.44
FAM49B-225ENST00000523288 BCL11AQ9H165 835 aa6.03□□□□□ -1.44
FAM49B-225ENST00000523288 CENPBP07199 599 aaPredicted RBP6.03□□□□□ -1.44
FAM49B-225ENST00000523288 CLSPNQ9HAW4 1339 aa6□□□□□ -1.45
FAM49B-225ENST00000523288 SLC24A1O60721 1099 aa5.96□□□□□ -1.46
FAM49B-225ENST00000523288 SUPT5HO00267 1087 aaKnown RBP5.96□□□□□ -1.46
FAM49B-225ENST00000523288 PPARGC1BQ86YN6 1023 aaKnown RBP5.95□□□□□ -1.46
FAM49B-225ENST00000523288 FAM9AQ8IZU1 332 aaPredicted RBP5.93□□□□□ -1.46
FAM49B-225ENST00000523288 ANP32EQ9BTT0 268 aa5.92□□□□□ -1.46
FAM49B-225ENST00000523288 TRIM26Q12899 539 aaPredicted RBP5.91□□□□□ -1.46
FAM49B-225ENST00000523288 UNC13AQ9UPW8 1703 aa5.89□□□□□ -1.47
FAM49B-225ENST00000523288 SENP3Q9H4L4 574 aaPredicted RBP5.89□□□□□ -1.47
FAM49B-225ENST00000523288 DAXXQ9UER7 740 aaPredicted RBP5.89□□□□□ -1.47
FAM49B-225ENST00000523288 SHROOM4Q9ULL8 1493 aa5.88□□□□□ -1.47
FAM49B-225ENST00000523288 EHMT2Q96KQ7 1210 aa5.88□□□□□ -1.47
FAM49B-225ENST00000523288 PCGF6Q9BYE7 350 aa5.87□□□□□ -1.47
FAM49B-225ENST00000523288 NEUROD1Q13562 356 aa5.85□□□□□ -1.47
FAM49B-225ENST00000523288 MYT1LQ9UL68 1186 aa5.84□□□□□ -1.47
FAM49B-225ENST00000523288 GTF3C3Q9Y5Q9 886 aa5.83□□□□□ -1.48
FAM49B-225ENST00000523288 AEBP2Q6ZN18 517 aaPredicted RBP5.81□□□□□ -1.48
FAM49B-225ENST00000523288 ZCCHC6Q5VYS8 1495 aaKnown RBP5.79□□□□□ -1.48
FAM49B-225ENST00000523288 ERICH6BQ5W0A0 696 aa5.77□□□□□ -1.49
FAM49B-225ENST00000523288 UBE2Q2Q8WVN8 375 aa5.76□□□□□ -1.49
FAM49B-225ENST00000523288 TRIM41Q8WV44 630 aa5.71□□□□□ -1.5
FAM49B-225ENST00000523288 RANGAP1P46060 587 aaPredicted RBP5.69□□□□□ -1.5
FAM49B-225ENST00000523288 CSRNP3Q8WYN3 585 aa5.69□□□□□ -1.5
FAM49B-225ENST00000523288 ATP1B4Q9UN42 357 aaPredicted RBP5.67□□□□□ -1.5
FAM49B-225ENST00000523288 TSHZ2Q9NRE2 1034 aa5.66□□□□□ -1.5
FAM49B-225ENST00000523288 BICRAQ9NZM4 1560 aa5.65□□□□□ -1.5
FAM49B-225ENST00000523288 NACADO15069 1562 aa5.65□□□□□ -1.5
FAM49B-225ENST00000523288 DIEXFQ68CQ4 756 aaKnown RBP5.65□□□□□ -1.51
FAM49B-225ENST00000523288 EIF5BO60841 1220 aaKnown RBP5.64□□□□□ -1.51
FAM49B-225ENST00000523288 FANCIQ9NVI1 1328 aa5.61□□□□□ -1.51
FAM49B-225ENST00000523288 WRNQ14191 1432 aaPredicted RBP eCLIP5.6□□□□□ -1.51
FAM49B-225ENST00000523288 SUPT16HQ9Y5B9 1047 aaKnown RBP5.6□□□□□ -1.51
FAM49B-225ENST00000523288 PEG3Q9GZU2 1588 aa5.6□□□□□ -1.51
FAM49B-225ENST00000523288 DCAF8L1A6NGE4 600 aa5.59□□□□□ -1.51
FAM49B-225ENST00000523288 ZNF316A6NFI3 1004 aaPredicted RBP5.56□□□□□ -1.52
FAM49B-225ENST00000523288 ABCC9O60706 1549 aa5.56□□□□□ -1.52
FAM49B-225ENST00000523288 PHF23Q9BUL5 403 aaPredicted RBP5.54□□□□□ -1.52
FAM49B-225ENST00000523288 EIF4G1Q04637 1599 aaKnown RBP5.53□□□□□ -1.52
FAM49B-225ENST00000523288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.53□□□□□ -1.52
FAM49B-225ENST00000523288 HNRNPUL2Q1KMD3 747 aaKnown RBP5.53□□□□□ -1.52
FAM49B-225ENST00000523288 UBTFP17480 764 aaKnown RBP5.5□□□□□ -1.53
FAM49B-225ENST00000523288 PKNOX2Q96KN3 472 aa5.49□□□□□ -1.53
FAM49B-225ENST00000523288 ANO8Q9HCE9 1232 aaPredicted RBP5.48□□□□□ -1.53
FAM49B-225ENST00000523288 RB1CC1Q8TDY2 1594 aa5.48□□□□□ -1.53
FAM49B-225ENST00000523288 PRDM2Q13029 1718 aa5.48□□□□□ -1.53
FAM49B-225ENST00000523288 PABPN1Q86U42 306 aaKnown RBP eCLIP5.47□□□□□ -1.53
FAM49B-225ENST00000523288 C11orf95C9JLR9 678 aaPredicted RBP5.47□□□□□ -1.53
FAM49B-225ENST00000523288 RBM19Q9Y4C8 960 aaKnown RBP5.47□□□□□ -1.53
FAM49B-225ENST00000523288 DEKP35659 375 aaKnown RBP5.45□□□□□ -1.54
FAM49B-225ENST00000523288 MSH5O43196 834 aa5.44□□□□□ -1.54
FAM49B-225ENST00000523288 NEFLP07196 543 aa5.43□□□□□ -1.54
FAM49B-225ENST00000523288 CUX2O14529 1486 aa5.42□□□□□ -1.54
FAM49B-225ENST00000523288 MIER1Q8N108 512 aa5.42□□□□□ -1.54
FAM49B-225ENST00000523288 CCER1Q8TC90 406 aaPredicted RBP5.41□□□□□ -1.54
FAM49B-225ENST00000523288 FBLN2P98095 1184 aa5.41□□□□□ -1.54
FAM49B-225ENST00000523288 SALL2Q9Y467 1007 aaPredicted RBP5.41□□□□□ -1.54
FAM49B-225ENST00000523288 ARXQ96QS3 562 aa5.41□□□□□ -1.54
FAM49B-225ENST00000523288 PODXL2Q9NZ53 605 aa5.41□□□□□ -1.54
FAM49B-225ENST00000523288 GLIPR1L2Q4G1C9 344 aa5.4□□□□□ -1.54
FAM49B-225ENST00000523288 RSPH6AQ9H0K4 717 aa5.4□□□□□ -1.54
FAM49B-225ENST00000523288 WASHC2AQ641Q2 1341 aa5.39□□□□□ -1.55
FAM49B-225ENST00000523288 WASHC2CQ9Y4E1 1318 aa5.39□□□□□ -1.55
FAM49B-225ENST00000523288 LOC105371045A0A1W2PR82 267 aa5.38□□□□□ -1.55
FAM49B-225ENST00000523288 NCBP3Q53F19 620 aaKnown RBP5.38□□□□□ -1.55
FAM49B-225ENST00000523288 USP35Q9P2H5 1018 aa5.37□□□□□ -1.55
FAM49B-225ENST00000523288 EEA1Q15075 1411 aa5.37□□□□□ -1.55
FAM49B-225ENST00000523288 NCAPD3P42695 1498 aa5.36□□□□□ -1.55
FAM49B-225ENST00000523288 ITGAEP38570 1179 aa5.35□□□□□ -1.55
FAM49B-225ENST00000523288 SMARCA2P51531 1590 aa5.33□□□□□ -1.56
FAM49B-225ENST00000523288 CENPJQ9HC77 1338 aaPredicted RBP5.33□□□□□ -1.56
FAM49B-225ENST00000523288 YTHDC1Q96MU7 727 aaKnown RBP5.33□□□□□ -1.56
FAM49B-225ENST00000523288 POLR3GLQ9BT43 218 aa5.32□□□□□ -1.56
FAM49B-225ENST00000523288 SLC4A1APQ9BWU0 796 aaKnown RBP5.31□□□□□ -1.56
FAM49B-225ENST00000523288 KIF21BO75037 1637 aa5.31□□□□□ -1.56
FAM49B-225ENST00000523288 CCER2I3L3R5 266 aa5.31□□□□□ -1.56
FAM49B-225ENST00000523288 FAM43AQ8N2R8 423 aa5.31□□□□□ -1.56
FAM49B-225ENST00000523288 NOP58Q9Y2X3 529 aaKnown RBP5.31□□□□□ -1.56
FAM49B-225ENST00000523288 USP34Q70CQ2 3546 aa5.3□□□□□ -1.56
FAM49B-225ENST00000523288 PLEKHG5O94827 1062 aa5.3□□□□□ -1.56
FAM49B-225ENST00000523288 PLPPR3Q6T4P5 718 aa5.3□□□□□ -1.56
FAM49B-225ENST00000523288 HMGXB3Q12766 1538 aa5.3□□□□□ -1.56
FAM49B-225ENST00000523288 PIAS4Q8N2W9 510 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms