RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 C4BP0C0L5 1744 aa30.06■■■□□ 2.4
HDAC2-214ENST00000523240 NFATC2IPQ8NCF5 419 aa30.05■■■□□ 2.4
HDAC2-214ENST00000523240 RBM42Q9BTD8 480 aaKnown RBP30.05■■■□□ 2.4
HDAC2-214ENST00000523240 RSPH6AQ9H0K4 717 aa30.05■■■□□ 2.4
HDAC2-214ENST00000523240 ATF5Q9Y2D1 282 aaPredicted RBP30.05■■■□□ 2.4
HDAC2-214ENST00000523240 MSH5O43196 834 aa30.04■■■□□ 2.4
HDAC2-214ENST00000523240 ATP6V1AP38606 617 aa30.04■■■□□ 2.4
HDAC2-214ENST00000523240 AK7Q96M32 723 aa30.04■■■□□ 2.4
HDAC2-214ENST00000523240 MTFR1LQ9H019 292 aa30.04■■■□□ 2.4
HDAC2-214ENST00000523240 RNMTO43148 476 aaKnown RBP30.03■■■□□ 2.4
HDAC2-214ENST00000523240 MAP3K5Q99683 1374 aa30.03■■■□□ 2.4
HDAC2-214ENST00000523240 PNPLA7Q6ZV29 1317 aa30.02■■■□□ 2.4
HDAC2-214ENST00000523240 NEFMP07197 916 aa30.02■■■□□ 2.4
HDAC2-214ENST00000523240 LGR6Q9HBX8 967 aa30.02■■■□□ 2.4
HDAC2-214ENST00000523240 FCHSD2O94868 740 aa30.01■■■□□ 2.39
HDAC2-214ENST00000523240 SLC52A2Q9HAB3 445 aa30.01■■■□□ 2.39
HDAC2-214ENST00000523240 GNAT3A8MTJ3 354 aa30■■■□□ 2.39
HDAC2-214ENST00000523240 MYBBP1AQ9BQG0 1328 aaKnown RBP29.99■■■□□ 2.39
HDAC2-214ENST00000523240 ADAMTS7Q9UKP4 1686 aa29.99■■■□□ 2.39
HDAC2-214ENST00000523240 MRC1P22897 1456 aa29.99■■■□□ 2.39
HDAC2-214ENST00000523240 SLC16A10Q8TF71 515 aa29.98■■■□□ 2.39
HDAC2-214ENST00000523240 ZNF831Q5JPB2 1677 aa29.98■■■□□ 2.39
HDAC2-214ENST00000523240 PTCD1O75127 700 aaKnown RBP29.97■■■□□ 2.39
HDAC2-214ENST00000523240 LINC00116Q8NCU8 138 aa29.97■■■□□ 2.39
HDAC2-214ENST00000523240 FLAD1Q8NFF5 587 aa29.97■■■□□ 2.39
HDAC2-214ENST00000523240 PHACTR3Q96KR7 559 aa29.97■■■□□ 2.39
HDAC2-214ENST00000523240 UBR3Q6ZT12 1888 aa29.97■■■□□ 2.39
HDAC2-214ENST00000523240 TEFQ10587 303 aa29.96■■■□□ 2.39
HDAC2-214ENST00000523240 ITPK1Q13572 414 aa29.96■■■□□ 2.39
HDAC2-214ENST00000523240 ZNF316A6NFI3 1004 aaPredicted RBP29.93■■■□□ 2.38
HDAC2-214ENST00000523240 PHF14O94880 888 aa29.93■■■□□ 2.38
HDAC2-214ENST00000523240 COL23A1Q86Y22 540 aaPredicted RBP29.93■■■□□ 2.38
HDAC2-214ENST00000523240 PNNQ9H307 717 aaKnown RBP29.93■■■□□ 2.38
HDAC2-214ENST00000523240 COL5A3P25940 1745 aaPredicted RBP29.93■■■□□ 2.38
HDAC2-214ENST00000523240 GNPATO15228 680 aa29.92■■■□□ 2.38
HDAC2-214ENST00000523240 PTGER2P43116 358 aa29.92■■■□□ 2.38
HDAC2-214ENST00000523240 RTF1Q92541 710 aaKnown RBP29.92■■■□□ 2.38
HDAC2-214ENST00000523240 POLD1P28340 1107 aa29.91■■■□□ 2.38
HDAC2-214ENST00000523240 SLC39A6Q13433 755 aa29.89■■■□□ 2.38
HDAC2-214ENST00000523240 TTC5Q8N0Z6 440 aa29.89■■■□□ 2.38
HDAC2-214ENST00000523240 SLC4A9Q96Q91 983 aa29.89■■■□□ 2.38
HDAC2-214ENST00000523240 MAPK8IP3Q9UPT6 1336 aa29.89■■■□□ 2.38
HDAC2-214ENST00000523240 SIPA1L3O60292 1781 aaPredicted RBP29.88■■■□□ 2.37
HDAC2-214ENST00000523240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.88■■■□□ 2.37
HDAC2-214ENST00000523240 SSFA2P28290 1259 aa29.88■■■□□ 2.37
HDAC2-214ENST00000523240 IL17REQ8NFR9 667 aa29.88■■■□□ 2.37
HDAC2-214ENST00000523240 PRKRIP1Q9H875 184 aaPredicted RBP29.88■■■□□ 2.37
HDAC2-214ENST00000523240 TJP1Q07157 1748 aa29.87■■■□□ 2.37
HDAC2-214ENST00000523240 DLG5Q8TDM6 1919 aa29.86■■■□□ 2.37
HDAC2-214ENST00000523240 ARXQ96QS3 562 aa29.86■■■□□ 2.37
HDAC2-214ENST00000523240 RTCBQ9Y3I0 505 aaKnown RBP29.85■■■□□ 2.37
HDAC2-214ENST00000523240 CICQ96RK0 1608 aaPredicted RBP29.85■■■□□ 2.37
HDAC2-214ENST00000523240 COL24A1Q17RW2 1714 aa29.85■■■□□ 2.37
HDAC2-214ENST00000523240 MSL1Q68DK7 614 aa29.84■■■□□ 2.37
HDAC2-214ENST00000523240 SGIP1Q9BQI5 828 aa29.84■■■□□ 2.37
HDAC2-214ENST00000523240 CNTNAP4Q9C0A0 1308 aa29.84■■■□□ 2.37
HDAC2-214ENST00000523240 UBR2Q8IWV8 1755 aa29.84■■■□□ 2.37
HDAC2-214ENST00000523240 CEMIPQ8WUJ3 1361 aa29.83■■■□□ 2.37
HDAC2-214ENST00000523240 WDR43Q15061 677 aaKnown RBP eCLIP29.83■■■□□ 2.37
HDAC2-214ENST00000523240 RC3H1Q5TC82 1133 aaKnown RBP29.83■■■□□ 2.37
HDAC2-214ENST00000523240 MYH14Q7Z406 1995 aaKnown RBP29.83■■■□□ 2.37
HDAC2-214ENST00000523240 KCPQ6ZWJ8 1503 aa29.82■■■□□ 2.36
HDAC2-214ENST00000523240 SMIM5Q71RC9 77 aa29.82■■■□□ 2.36
HDAC2-214ENST00000523240 MCM10Q7L590 875 aa29.81■■■□□ 2.36
HDAC2-214ENST00000523240 AMIGO3Q86WK7 504 aa29.81■■■□□ 2.36
HDAC2-214ENST00000523240 KLHL34Q8N239 644 aa29.81■■■□□ 2.36
HDAC2-214ENST00000523240 HTATSF1O43719 755 aaKnown RBP29.8■■■□□ 2.36
HDAC2-214ENST00000523240 CRKLP46109 303 aaKnown RBP29.79■■■□□ 2.36
HDAC2-214ENST00000523240 TRAPPC3LQ5T215 181 aa29.79■■■□□ 2.36
HDAC2-214ENST00000523240 DNAJC10Q8IXB1 793 aa29.79■■■□□ 2.36
HDAC2-214ENST00000523240 PLEKHF1Q96S99 279 aa29.79■■■□□ 2.36
HDAC2-214ENST00000523240 FHDC1Q9C0D6 1143 aaPredicted RBP29.79■■■□□ 2.36
HDAC2-214ENST00000523240 DCAF8L1A6NGE4 600 aa29.78■■■□□ 2.36
HDAC2-214ENST00000523240 BTBD11A6QL63 1104 aa29.78■■■□□ 2.36
HDAC2-214ENST00000523240 NFE2L2Q16236 605 aa29.78■■■□□ 2.36
HDAC2-214ENST00000523240 ZNF790Q6PG37 636 aa29.78■■■□□ 2.36
HDAC2-214ENST00000523240 RPS6KA4O75676 772 aa29.77■■■□□ 2.36
HDAC2-214ENST00000523240 ADRA2BP18089 450 aa29.77■■■□□ 2.36
HDAC2-214ENST00000523240 DCTN1Q14203 1278 aa29.77■■■□□ 2.36
HDAC2-214ENST00000523240 VSIG10Q8N0Z9 540 aa29.76■■■□□ 2.35
HDAC2-214ENST00000523240 RFC4P35249 363 aa29.74■■■□□ 2.35
HDAC2-214ENST00000523240 CCDC87Q9NVE4 849 aa29.74■■■□□ 2.35
HDAC2-214ENST00000523240 C4AP0C0L4 1744 aa29.74■■■□□ 2.35
HDAC2-214ENST00000523240 ZNF496Q96IT1 587 aaPredicted RBP29.73■■■□□ 2.35
HDAC2-214ENST00000523240 FMNL2Q96PY5 1086 aa29.73■■■□□ 2.35
HDAC2-214ENST00000523240 SYT17Q9BSW7 474 aa29.73■■■□□ 2.35
HDAC2-214ENST00000523240 HEG1Q9ULI3 1381 aa29.72■■■□□ 2.35
HDAC2-214ENST00000523240 STARD3NLO95772 234 aa29.71■■■□□ 2.35
HDAC2-214ENST00000523240 ARHGEF1Q92888 912 aaKnown RBP29.71■■■□□ 2.35
HDAC2-214ENST00000523240 CYP19A1P11511 503 aaPredicted RBP29.7■■■□□ 2.35
HDAC2-214ENST00000523240 CCDC146Q8IYE0 955 aa29.7■■■□□ 2.35
HDAC2-214ENST00000523240 ANP32CO43423 234 aa29.69■■■□□ 2.34
HDAC2-214ENST00000523240 TAF7Q15545 349 aaPredicted RBP29.69■■■□□ 2.34
HDAC2-214ENST00000523240 INTS5Q6P9B9 1019 aaKnown RBP29.69■■■□□ 2.34
HDAC2-214ENST00000523240 TEX13AQ9BXU3 409 aaPredicted RBP29.69■■■□□ 2.34
HDAC2-214ENST00000523240 RIPK4P57078 832 aa29.67■■■□□ 2.34
HDAC2-214ENST00000523240 KCNQ3O43525 872 aa29.66■■■□□ 2.34
HDAC2-214ENST00000523240 LMOD3Q0VAK6 560 aa29.66■■■□□ 2.34
HDAC2-214ENST00000523240 RUNDC1Q96C34 613 aa29.66■■■□□ 2.34
HDAC2-214ENST00000523240 NLGN1Q8N2Q7 840 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms