RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 NHSL1Q5SYE7 1610 aa9.42□□□□□ -0.9
PABPC1-220ENST00000522658 SETBP1Q9Y6X0 1596 aa9.42□□□□□ -0.9
PABPC1-220ENST00000522658 MST1RQ04912 1400 aa9.42□□□□□ -0.9
PABPC1-220ENST00000522658 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
PABPC1-220ENST00000522658 PTPRUQ92729 1446 aa9.41□□□□□ -0.9
PABPC1-220ENST00000522658 ATAD2Q6PL18 1390 aa9.41□□□□□ -0.9
PABPC1-220ENST00000522658 RBM6P78332 1123 aaKnown RBP9.41□□□□□ -0.9
PABPC1-220ENST00000522658 QTRT2Q9H974 415 aaKnown RBP9.41□□□□□ -0.9
PABPC1-220ENST00000522658 PKD2L1Q9P0L9 805 aa9.41□□□□□ -0.9
PABPC1-220ENST00000522658 RGS12O14924 1447 aa9.4□□□□□ -0.9
PABPC1-220ENST00000522658 PNPLA6Q8IY17 1366 aa9.4□□□□□ -0.9
PABPC1-220ENST00000522658 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
PABPC1-220ENST00000522658 FMNL1O95466 1100 aaPredicted RBP9.4□□□□□ -0.9
PABPC1-220ENST00000522658 RPIAP49247 311 aa9.4□□□□□ -0.9
PABPC1-220ENST00000522658 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
PABPC1-220ENST00000522658 BRICD5Q6PL45 260 aa9.4□□□□□ -0.9
PABPC1-220ENST00000522658 LMOD2Q6P5Q4 547 aa9.39□□□□□ -0.91
PABPC1-220ENST00000522658 FCF1Q9Y324 198 aaKnown RBP9.39□□□□□ -0.91
PABPC1-220ENST00000522658 NALCNQ8IZF0 1738 aa9.39□□□□□ -0.91
PABPC1-220ENST00000522658 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
PABPC1-220ENST00000522658 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-220ENST00000522658 PTCH1Q13635 1447 aa9.38□□□□□ -0.91
PABPC1-220ENST00000522658 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
PABPC1-220ENST00000522658 METP08581 1390 aa9.37□□□□□ -0.91
PABPC1-220ENST00000522658 MSS51Q4VC12 460 aa9.37□□□□□ -0.91
PABPC1-220ENST00000522658 PRDM9Q9NQV7 894 aa9.37□□□□□ -0.91
PABPC1-220ENST00000522658 USP21Q9UK80 565 aa9.37□□□□□ -0.91
PABPC1-220ENST00000522658 TRPC5Q9UL62 973 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-220ENST00000522658 KIF1BO60333 1816 aa9.37□□□□□ -0.91
PABPC1-220ENST00000522658 C1orf167Q5SNV9 1468 aa9.36□□□□□ -0.91
PABPC1-220ENST00000522658 CLTCL1P53675 1640 aa9.36□□□□□ -0.91
PABPC1-220ENST00000522658 POTECB2RU33 542 aa9.36□□□□□ -0.91
PABPC1-220ENST00000522658 CD46P15529 392 aa9.36□□□□□ -0.91
PABPC1-220ENST00000522658 MAP2K5Q13163 448 aa9.36□□□□□ -0.91
PABPC1-220ENST00000522658 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
PABPC1-220ENST00000522658 DDX17Q92841 729 aaKnown RBP9.36□□□□□ -0.91
PABPC1-220ENST00000522658 NEXMIFQ5QGS0 1516 aa9.36□□□□□ -0.91
PABPC1-220ENST00000522658 NPHP3Q7Z494 1330 aa9.35□□□□□ -0.91
PABPC1-220ENST00000522658 HFM1A2PYH4 1435 aa9.35□□□□□ -0.91
PABPC1-220ENST00000522658 LRPPRCP42704 1394 aaKnown RBP9.35□□□□□ -0.91
PABPC1-220ENST00000522658 FOXC1Q12948 553 aa9.34□□□□□ -0.91
PABPC1-220ENST00000522658 AAASQ9NRG9 546 aa9.34□□□□□ -0.91
PABPC1-220ENST00000522658 TOR4AQ9NXH8 423 aa9.34□□□□□ -0.91
PABPC1-220ENST00000522658 IRF6O14896 467 aa9.33□□□□□ -0.92
PABPC1-220ENST00000522658 SF3B2Q13435 895 aaKnown RBP9.33□□□□□ -0.92
PABPC1-220ENST00000522658 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
PABPC1-220ENST00000522658 CD2BP2O95400 341 aaKnown RBP9.32□□□□□ -0.92
PABPC1-220ENST00000522658 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
PABPC1-220ENST00000522658 CRIPAKQ8N1N5 446 aa9.32□□□□□ -0.92
PABPC1-220ENST00000522658 ST8SIA5O15466 376 aa9.31□□□□□ -0.92
PABPC1-220ENST00000522658 AVPP01185 164 aa9.31□□□□□ -0.92
PABPC1-220ENST00000522658 MMP16P51512 607 aa9.31□□□□□ -0.92
PABPC1-220ENST00000522658 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
PABPC1-220ENST00000522658 ROBO2Q9HCK4 1378 aa9.31□□□□□ -0.92
PABPC1-220ENST00000522658 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
PABPC1-220ENST00000522658 RPGRIP1LQ68CZ1 1315 aa9.31□□□□□ -0.92
PABPC1-220ENST00000522658 CDC42BPGQ6DT37 1551 aa9.3□□□□□ -0.92
PABPC1-220ENST00000522658 PPARGC1BQ86YN6 1023 aaKnown RBP9.3□□□□□ -0.92
PABPC1-220ENST00000522658 CCDC125Q86Z20 511 aa9.3□□□□□ -0.92
PABPC1-220ENST00000522658 LAMC1P11047 1609 aa9.3□□□□□ -0.92
PABPC1-220ENST00000522658 ATRNO75882 1429 aa9.3□□□□□ -0.92
PABPC1-220ENST00000522658 MINK1Q8N4C8 1332 aaPredicted RBP9.3□□□□□ -0.92
PABPC1-220ENST00000522658 KDM4AO75164 1064 aa9.29□□□□□ -0.92
PABPC1-220ENST00000522658 CCDC9Q9Y3X0 531 aaKnown RBP9.29□□□□□ -0.92
PABPC1-220ENST00000522658 COL22A1Q8NFW1 1626 aaPredicted RBP9.29□□□□□ -0.92
PABPC1-220ENST00000522658 Q3C1V9 767 aa9.28□□□□□ -0.92
PABPC1-220ENST00000522658 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
PABPC1-220ENST00000522658 FNBP4Q8N3X1 1017 aaPredicted RBP9.28□□□□□ -0.92
PABPC1-220ENST00000522658 CCDC144AA2RUR9 1427 aa9.28□□□□□ -0.92
PABPC1-220ENST00000522658 NAIPQ13075 1403 aa9.28□□□□□ -0.92
PABPC1-220ENST00000522658 MYOM2P54296 1465 aa9.28□□□□□ -0.92
PABPC1-220ENST00000522658 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
PABPC1-220ENST00000522658 XPCQ01831 940 aaPredicted RBP9.27□□□□□ -0.93
PABPC1-220ENST00000522658 STK26Q9P289 416 aa9.27□□□□□ -0.93
PABPC1-220ENST00000522658 PRAG1Q86YV5 1406 aa9.27□□□□□ -0.93
PABPC1-220ENST00000522658 RRBP1Q9P2E9 1410 aaKnown RBP9.27□□□□□ -0.93
PABPC1-220ENST00000522658 KIF1AQ12756 1690 aa9.26□□□□□ -0.93
PABPC1-220ENST00000522658 FOXO3O43524 673 aa9.26□□□□□ -0.93
PABPC1-220ENST00000522658 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
PABPC1-220ENST00000522658 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
PABPC1-220ENST00000522658 HLA-CQ95604 372 aa9.26□□□□□ -0.93
PABPC1-220ENST00000522658 CCDC102AQ96A19 550 aa9.26□□□□□ -0.93
PABPC1-220ENST00000522658 GJD4Q96KN9 370 aaPredicted RBP9.26□□□□□ -0.93
PABPC1-220ENST00000522658 USB1Q9BQ65 265 aaKnown RBP9.26□□□□□ -0.93
PABPC1-220ENST00000522658 DACH1Q9UI36 760 aa9.26□□□□□ -0.93
PABPC1-220ENST00000522658 PPLO60437 1756 aa9.26□□□□□ -0.93
PABPC1-220ENST00000522658 MARF1Q9Y4F3 1742 aaKnown RBP9.25□□□□□ -0.93
PABPC1-220ENST00000522658 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-220ENST00000522658 ZBTB24O43167 697 aaPredicted RBP9.25□□□□□ -0.93
PABPC1-220ENST00000522658 USP46P62068 366 aa9.25□□□□□ -0.93
PABPC1-220ENST00000522658 PSME1Q06323 249 aa9.25□□□□□ -0.93
PABPC1-220ENST00000522658 PXDNQ92626 1479 aa9.25□□□□□ -0.93
PABPC1-220ENST00000522658 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.25□□□□□ -0.93
PABPC1-220ENST00000522658 ANKRD30BQ9BXX2 1392 aa9.24□□□□□ -0.93
PABPC1-220ENST00000522658 WNT7AO00755 349 aa9.24□□□□□ -0.93
PABPC1-220ENST00000522658 HOXA2O43364 376 aa9.24□□□□□ -0.93
PABPC1-220ENST00000522658 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
PABPC1-220ENST00000522658 TRIM32Q13049 653 aa9.24□□□□□ -0.93
PABPC1-220ENST00000522658 RGL3Q3MIN7 710 aa9.24□□□□□ -0.93
PABPC1-220ENST00000522658 UNC5CLQ8IV45 518 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms