RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MORC4Q8TE76 937 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 RBCK1Q9BYM8 510 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 RNF19AQ9NV58 838 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 CHPF2Q9P2E5 772 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 FAN1Q9Y2M0 1017 aa5.56□□□□□ -1.52
SKP1-209ENST00000522552 MRPL42Q9Y6G3 142 aaKnown RBP5.56□□□□□ -1.52
SKP1-209ENST00000522552 CCDC194A0A1B0GVG4 234 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 TREHO43280 583 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 SORBS3O60504 671 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 CFHP08603 1231 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 BMS1Q14692 1282 aaKnown RBP5.55□□□□□ -1.52
SKP1-209ENST00000522552 EML3Q32P44 896 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 SOGA3Q5TF21 947 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 TMC4Q7Z404 712 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 PHTF2Q8N3S3 785 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 SYMPKQ92797 1274 aaKnown RBP5.55□□□□□ -1.52
SKP1-209ENST00000522552 DUSP9Q99956 384 aaKnown RBP5.55□□□□□ -1.52
SKP1-209ENST00000522552 MKNK1Q9BUB5 465 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 CEP126Q9P2H0 1117 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 KIAA1024Q9UPX6 916 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.55□□□□□ -1.52
SKP1-209ENST00000522552 COL4A3BPQ9Y5P4 624 aa5.55□□□□□ -1.52
SKP1-209ENST00000522552 LDHBP07195 334 aaKnown RBP5.54□□□□□ -1.52
SKP1-209ENST00000522552 ARID5AQ03989 594 aa5.54□□□□□ -1.52
SKP1-209ENST00000522552 RNF187Q5TA31 235 aaPredicted RBP5.54□□□□□ -1.52
SKP1-209ENST00000522552 Q6ZNB5 142 aa5.54□□□□□ -1.52
SKP1-209ENST00000522552 CAPN12Q6ZSI9 719 aa5.54□□□□□ -1.52
SKP1-209ENST00000522552 SIX5Q8N196 739 aa5.54□□□□□ -1.52
SKP1-209ENST00000522552 MAGEC2Q9UBF1 373 aaPredicted RBP5.54□□□□□ -1.52
SKP1-209ENST00000522552 VTI1BQ9UEU0 232 aa5.54□□□□□ -1.52
SKP1-209ENST00000522552 PRPF40AO75400 957 aaKnown RBP5.53□□□□□ -1.52
SKP1-209ENST00000522552 ATP1A2P50993 1020 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 MCCD1P59942 119 aaPredicted RBP5.53□□□□□ -1.52
SKP1-209ENST00000522552 COPS2P61201 443 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 DAB2P98082 770 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 HSP90AB2PQ58FF8 381 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 TRIM50Q86XT4 487 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 ZBTB7BO15156 539 aaPredicted RBP5.53□□□□□ -1.52
SKP1-209ENST00000522552 LGR5O75473 907 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 SEC13P55735 322 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 PDE3BQ13370 1112 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 TRAF7Q6Q0C0 670 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 PCDH12Q9NPG4 1184 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 FKBPLQ9UIM3 349 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 CHIC2Q9UKJ5 165 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 INPP5FQ9Y2H2 1132 aa5.53□□□□□ -1.52
SKP1-209ENST00000522552 ITGAEP38570 1179 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 MAPK8P45983 427 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 FGD1P98174 961 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 PSMD2Q13200 908 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 MAP7D1Q3KQU3 841 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 NYAP1Q6ZVC0 841 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 FILIP1Q7Z7B0 1213 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 MCF2L2Q86YR7 1114 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 IFT57Q9NWB7 429 aa5.52□□□□□ -1.53
SKP1-209ENST00000522552 STK10O94804 968 aaKnown RBP5.51□□□□□ -1.53
SKP1-209ENST00000522552 DSC3Q14574 896 aa5.51□□□□□ -1.53
SKP1-209ENST00000522552 RPUSD2Q8IZ73 545 aaKnown RBP5.51□□□□□ -1.53
SKP1-209ENST00000522552 MTRQ99707 1265 aa5.51□□□□□ -1.53
SKP1-209ENST00000522552 IRF2BPLQ9H1B7 796 aa5.51□□□□□ -1.53
SKP1-209ENST00000522552 GABBR1Q9UBS5 961 aa5.51□□□□□ -1.53
SKP1-209ENST00000522552 NOD1Q9Y239 953 aa5.51□□□□□ -1.53
SKP1-209ENST00000522552 EMILIN1Q9Y6C2 1016 aa5.51□□□□□ -1.53
SKP1-209ENST00000522552 SFI1A8K8P3 1242 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 PUS10Q3MIT2 529 aaKnown RBP5.5□□□□□ -1.53
SKP1-209ENST00000522552 TSGA10IPQ3SY00 556 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 KMT5BQ4FZB7 885 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 BLOC1S3Q6QNY0 202 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 SMC5Q8IY18 1101 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 HELQQ8TDG4 1101 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 PCDHB3Q9Y5E6 796 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 NDUFB5O43674 189 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 XRCC5P13010 732 aaKnown RBP5.5□□□□□ -1.53
SKP1-209ENST00000522552 NPR3P17342 541 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 RACK1P63244 317 aaKnown RBP5.5□□□□□ -1.53
SKP1-209ENST00000522552 EHHADHQ08426 723 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 FKBP5Q13451 457 aaPredicted RBP5.5□□□□□ -1.53
SKP1-209ENST00000522552 NFE2L2Q16236 605 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 ZNF394Q53GI3 561 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 CCDC102BQ68D86 513 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 ZNF516Q92618 1163 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 PMM1Q92871 262 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 PURBQ96QR8 312 aaKnown RBP5.5□□□□□ -1.53
SKP1-209ENST00000522552 DDX41Q9UJV9 622 aaKnown RBP5.5□□□□□ -1.53
SKP1-209ENST00000522552 WWC3Q9ULE0 1092 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 PCDHGB7Q9Y5F8 929 aa5.5□□□□□ -1.53
SKP1-209ENST00000522552 U2SURPO15042 1029 aaKnown RBP5.49□□□□□ -1.53
SKP1-209ENST00000522552 PTCD1O75127 700 aaKnown RBP5.49□□□□□ -1.53
SKP1-209ENST00000522552 FAM13AO94988 1023 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 FGRP09769 529 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 PLCB3Q01970 1234 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 FUT2Q10981 343 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 NAA30Q147X3 362 aaPredicted RBP5.49□□□□□ -1.53
SKP1-209ENST00000522552 TJAP1Q5JTD0 557 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 DESI1Q6ICB0 168 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 LYPD8Q6UX82 237 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 APBB1IPQ7Z5R6 666 aaPredicted RBP5.49□□□□□ -1.53
SKP1-209ENST00000522552 RETREG3Q86VR2 466 aa5.49□□□□□ -1.53
SKP1-209ENST00000522552 TPCN2Q8NHX9 752 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms