RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 KCPQ6ZWJ8 1503 aa8.92□□□□□ -0.98
CDH12-208ENST00000522262 GNAT3A8MTJ3 354 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 CCER2I3L3R5 266 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 APAF1O14727 1248 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 APBA3O96018 575 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 C1orf141Q5JVX7 400 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 NFATC2IPQ8NCF5 419 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 RUNDC1Q96C34 613 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 LRRC4BQ9NT99 713 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 ASAP1Q9ULH1 1129 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 TAF1LQ8IZX4 1826 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 KDM3BQ7LBC6 1761 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 SLC52A2Q9HAB3 445 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 ATG3Q9NT62 314 aa8.91□□□□□ -0.98
CDH12-208ENST00000522262 KCNQ3O43525 872 aa8.9□□□□□ -0.98
CDH12-208ENST00000522262 TJP1Q07157 1748 aa8.9□□□□□ -0.98
CDH12-208ENST00000522262 ERVV-2B6SEH9 535 aa8.9□□□□□ -0.99
CDH12-208ENST00000522262 SLC39A6Q13433 755 aa8.9□□□□□ -0.99
CDH12-208ENST00000522262 NEUROD2Q15784 382 aa8.9□□□□□ -0.99
CDH12-208ENST00000522262 TUBGCP6Q96RT7 1819 aa8.9□□□□□ -0.99
CDH12-208ENST00000522262 RIPK4P57078 832 aa8.89□□□□□ -0.99
CDH12-208ENST00000522262 PALLDQ8WX93 1383 aa8.89□□□□□ -0.99
CDH12-208ENST00000522262 COL5A3P25940 1745 aaPredicted RBP8.89□□□□□ -0.99
CDH12-208ENST00000522262 MAPK8IP3Q9UPT6 1336 aa8.89□□□□□ -0.99
CDH12-208ENST00000522262 C5P01031 1676 aa8.89□□□□□ -0.99
CDH12-208ENST00000522262 PLSCR1O15162 318 aa8.88□□□□□ -0.99
CDH12-208ENST00000522262 HSP90AB1P08238 724 aaKnown RBP8.88□□□□□ -0.99
CDH12-208ENST00000522262 AMIGO3Q86WK7 504 aa8.88□□□□□ -0.99
CDH12-208ENST00000522262 ANO8Q9HCE9 1232 aaPredicted RBP8.88□□□□□ -0.99
CDH12-208ENST00000522262 TMOD3Q9NYL9 352 aa8.88□□□□□ -0.99
CDH12-208ENST00000522262 MIS18AQ9NYP9 233 aa8.88□□□□□ -0.99
CDH12-208ENST00000522262 CICQ96RK0 1608 aaPredicted RBP8.88□□□□□ -0.99
CDH12-208ENST00000522262 MYH14Q7Z406 1995 aaKnown RBP8.88□□□□□ -0.99
CDH12-208ENST00000522262 CABP4P57796 275 aa8.88□□□□□ -0.99
CDH12-208ENST00000522262 CCDC125Q86Z20 511 aa8.88□□□□□ -0.99
CDH12-208ENST00000522262 TXNRD1Q16881 649 aa8.88□□□□□ -0.99
CDH12-208ENST00000522262 DAXXQ9UER7 740 aaPredicted RBP8.88□□□□□ -0.99
CDH12-208ENST00000522262 ZNF831Q5JPB2 1677 aa8.87□□□□□ -0.99
CDH12-208ENST00000522262 ITPK1Q13572 414 aa8.87□□□□□ -0.99
CDH12-208ENST00000522262 PRAMEF22A3QJZ6 481 aa8.86□□□□□ -0.99
CDH12-208ENST00000522262 HTATSF1O43719 755 aaKnown RBP8.86□□□□□ -0.99
CDH12-208ENST00000522262 SPINK5Q9NQ38 1064 aaPredicted RBP8.86□□□□□ -0.99
CDH12-208ENST00000522262 BAG6P46379 1132 aa8.86□□□□□ -0.99
CDH12-208ENST00000522262 ZNF827Q17R98 1081 aa8.86□□□□□ -0.99
CDH12-208ENST00000522262 SMIM5Q71RC9 77 aa8.86□□□□□ -0.99
CDH12-208ENST00000522262 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
CDH12-208ENST00000522262 ZNF521Q96K83 1311 aa8.86□□□□□ -0.99
CDH12-208ENST00000522262 C4BP0C0L5 1744 aa8.86□□□□□ -0.99
CDH12-208ENST00000522262 PNNQ9H307 717 aaKnown RBP8.86□□□□□ -0.99
CDH12-208ENST00000522262 LINC00116Q8NCU8 138 aa8.85□□□□□ -0.99
CDH12-208ENST00000522262 UBR3Q6ZT12 1888 aa8.85□□□□□ -0.99
CDH12-208ENST00000522262 LOC102724428A0A0B4J2F2 783 aa8.85□□□□□ -0.99
CDH12-208ENST00000522262 PTCD1O75127 700 aaKnown RBP8.85□□□□□ -0.99
CDH12-208ENST00000522262 SIK1P57059 783 aa8.85□□□□□ -0.99
CDH12-208ENST00000522262 ZNF790Q6PG37 636 aa8.85□□□□□ -0.99
CDH12-208ENST00000522262 WWC1Q8IX03 1113 aa8.85□□□□□ -0.99
CDH12-208ENST00000522262 ZNF496Q96IT1 587 aaPredicted RBP8.85□□□□□ -0.99
CDH12-208ENST00000522262 PDGFDQ9GZP0 370 aaPredicted RBP8.85□□□□□ -0.99
CDH12-208ENST00000522262 SF3B2Q13435 895 aaKnown RBP8.84□□□□□ -0.99
CDH12-208ENST00000522262 KRT24Q2M2I5 525 aa8.84□□□□□ -0.99
CDH12-208ENST00000522262 RTF1Q92541 710 aaKnown RBP8.84□□□□□ -0.99
CDH12-208ENST00000522262 HEG1Q9ULI3 1381 aa8.84□□□□□ -0.99
CDH12-208ENST00000522262 BTBD11A6QL63 1104 aa8.84□□□□□ -0.99
CDH12-208ENST00000522262 ZNF853P0CG23 659 aa8.84□□□□□ -0.99
CDH12-208ENST00000522262 TEFQ10587 303 aa8.84□□□□□ -0.99
CDH12-208ENST00000522262 CCNL1Q9UK58 526 aaPredicted RBP8.84□□□□□ -0.99
CDH12-208ENST00000522262 CASZ1Q86V15 1759 aa8.83□□□□□ -1
CDH12-208ENST00000522262 TAF7Q15545 349 aaPredicted RBP8.83□□□□□ -1
CDH12-208ENST00000522262 CCDC27Q2M243 656 aa8.83□□□□□ -1
CDH12-208ENST00000522262 AKT1S1Q96B36 256 aa8.83□□□□□ -1
CDH12-208ENST00000522262 NEFMP07197 916 aa8.83□□□□□ -1
CDH12-208ENST00000522262 LAMB4A4D0S4 1761 aa8.82□□□□□ -1
CDH12-208ENST00000522262 CHL1O00533 1208 aa8.82□□□□□ -1
CDH12-208ENST00000522262 RBM42Q9BTD8 480 aaKnown RBP8.82□□□□□ -1
CDH12-208ENST00000522262 QSER1Q2KHR3 1735 aa8.82□□□□□ -1
CDH12-208ENST00000522262 ATP6V1AP38606 617 aa8.82□□□□□ -1
CDH12-208ENST00000522262 EIF4A1P60842 406 aaKnown RBP8.82□□□□□ -1
CDH12-208ENST00000522262 SLC27A3Q5K4L6 730 aa8.82□□□□□ -1
CDH12-208ENST00000522262 DNAJC10Q8IXB1 793 aa8.82□□□□□ -1
CDH12-208ENST00000522262 MBIPQ9NS73 344 aa8.82□□□□□ -1
CDH12-208ENST00000522262 C4AP0C0L4 1744 aa8.82□□□□□ -1
CDH12-208ENST00000522262 SMARCC1Q92922 1105 aaPredicted RBP8.81□□□□□ -1
CDH12-208ENST00000522262 TSR2Q969E8 191 aaKnown RBP8.81□□□□□ -1
CDH12-208ENST00000522262 PSDA5PKW4 1024 aaPredicted RBP8.81□□□□□ -1
CDH12-208ENST00000522262 LMOD3Q0VAK6 560 aa8.8□□□□□ -1
CDH12-208ENST00000522262 INTS5Q6P9B9 1019 aaKnown RBP8.8□□□□□ -1
CDH12-208ENST00000522262 CFAP44Q96MT7 982 aa8.8□□□□□ -1
CDH12-208ENST00000522262 USP16Q9Y5T5 823 aa8.8□□□□□ -1
CDH12-208ENST00000522262 CYP19A1P11511 503 aaPredicted RBP8.8□□□□□ -1
CDH12-208ENST00000522262 PIP4K2AP48426 406 aaPredicted RBP8.8□□□□□ -1
CDH12-208ENST00000522262 NCBP3Q53F19 620 aaKnown RBP8.8□□□□□ -1
CDH12-208ENST00000522262 TSPYL4Q9UJ04 414 aa8.8□□□□□ -1
CDH12-208ENST00000522262 PNPLA7Q6ZV29 1317 aa8.8□□□□□ -1
CDH12-208ENST00000522262 R3HDM1Q15032 1099 aaKnown RBP8.8□□□□□ -1
CDH12-208ENST00000522262 CDCA7LQ96GN5 454 aa8.8□□□□□ -1
CDH12-208ENST00000522262 LAS1LQ9Y4W2 734 aaKnown RBP8.8□□□□□ -1
CDH12-208ENST00000522262 GIGYF1O75420 1035 aaPredicted RBP8.79□□□□□ -1
CDH12-208ENST00000522262 SLC15A2Q16348 729 aa8.79□□□□□ -1
CDH12-208ENST00000522262 IFT57Q9NWB7 429 aa8.79□□□□□ -1
CDH12-208ENST00000522262 CRKLP46109 303 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms