RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
SMIM12-206ENST00000521580 SLKQ9H2G2 1235 aaPredicted RBP17.43■□□□□ 0.38
SMIM12-206ENST00000521580 PHAXQ9H814 394 aaKnown RBP17.42■□□□□ 0.38
SMIM12-206ENST00000521580 PLEKHM2Q8IWE5 1019 aa17.42■□□□□ 0.38
SMIM12-206ENST00000521580 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
SMIM12-206ENST00000521580 NLRP2Q9NX02 1062 aa17.42■□□□□ 0.38
SMIM12-206ENST00000521580 USP35Q9P2H5 1018 aa17.42■□□□□ 0.38
SMIM12-206ENST00000521580 SLIT3O75094 1523 aa17.41■□□□□ 0.38
SMIM12-206ENST00000521580 NFKBIBQ15653 356 aa17.41■□□□□ 0.38
SMIM12-206ENST00000521580 TBC1D2Q9BYX2 928 aa17.41■□□□□ 0.38
SMIM12-206ENST00000521580 RNMTO43148 476 aaKnown RBP17.41■□□□□ 0.38
SMIM12-206ENST00000521580 CADPS2Q86UW7 1296 aa17.41■□□□□ 0.38
SMIM12-206ENST00000521580 CABLES1Q8TDN4 633 aa17.41■□□□□ 0.38
SMIM12-206ENST00000521580 GNAI3P08754 354 aa17.41■□□□□ 0.38
SMIM12-206ENST00000521580 OTUD7AQ8TE49 926 aaPredicted RBP17.4■□□□□ 0.38
SMIM12-206ENST00000521580 MST1RQ04912 1400 aa17.4■□□□□ 0.38
SMIM12-206ENST00000521580 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
SMIM12-206ENST00000521580 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
SMIM12-206ENST00000521580 ERBB3P21860 1342 aa17.39■□□□□ 0.37
SMIM12-206ENST00000521580 RGPD2P0DJD1 1756 aa17.39■□□□□ 0.37
SMIM12-206ENST00000521580 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
SMIM12-206ENST00000521580 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
SMIM12-206ENST00000521580 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
SMIM12-206ENST00000521580 GSPT1P15170 499 aaKnown RBP17.38■□□□□ 0.37
SMIM12-206ENST00000521580 NPHP3Q7Z494 1330 aa17.38■□□□□ 0.37
SMIM12-206ENST00000521580 ANXA1P04083 346 aa17.38■□□□□ 0.37
SMIM12-206ENST00000521580 CDC45O75419 566 aa17.38■□□□□ 0.37
SMIM12-206ENST00000521580 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
SMIM12-206ENST00000521580 PXDNQ92626 1479 aa17.37■□□□□ 0.37
SMIM12-206ENST00000521580 CHRNA2Q15822 529 aa17.37■□□□□ 0.37
SMIM12-206ENST00000521580 TTC22Q5TAA0 569 aa17.37■□□□□ 0.37
SMIM12-206ENST00000521580 CHMP4AQ9BY43 222 aa17.37■□□□□ 0.37
SMIM12-206ENST00000521580 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
SMIM12-206ENST00000521580 LRRFIP2Q9Y608 721 aaKnown RBP17.37■□□□□ 0.37
SMIM12-206ENST00000521580 UBTFL1P0CB47 393 aaPredicted RBP17.36■□□□□ 0.37
SMIM12-206ENST00000521580 TRPM3Q9HCF6 1732 aaPredicted RBP17.36■□□□□ 0.37
SMIM12-206ENST00000521580 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
SMIM12-206ENST00000521580 HOXB7P09629 217 aa17.36■□□□□ 0.37
SMIM12-206ENST00000521580 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
SMIM12-206ENST00000521580 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
SMIM12-206ENST00000521580 PNMA6EA0A0J9YXQ4 647 aa17.34■□□□□ 0.37
SMIM12-206ENST00000521580 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
SMIM12-206ENST00000521580 PI4KAP2A4QPH2 592 aa17.34■□□□□ 0.37
SMIM12-206ENST00000521580 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
SMIM12-206ENST00000521580 PI4KAP1Q8N8J0 262 aa17.34■□□□□ 0.37
SMIM12-206ENST00000521580 FRAT2O75474 233 aaPredicted RBP17.34■□□□□ 0.37
SMIM12-206ENST00000521580 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
SMIM12-206ENST00000521580 ATP8B2P98198 1209 aa17.34■□□□□ 0.37
SMIM12-206ENST00000521580 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
SMIM12-206ENST00000521580 DCCP43146 1447 aa17.33■□□□□ 0.37
SMIM12-206ENST00000521580 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
SMIM12-206ENST00000521580 DNAAF4Q8WXU2 420 aa17.33■□□□□ 0.36
SMIM12-206ENST00000521580 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
SMIM12-206ENST00000521580 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
SMIM12-206ENST00000521580 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
SMIM12-206ENST00000521580 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
SMIM12-206ENST00000521580 SDSP20132 328 aa17.31■□□□□ 0.36
SMIM12-206ENST00000521580 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
SMIM12-206ENST00000521580 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
SMIM12-206ENST00000521580 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
SMIM12-206ENST00000521580 STRCP1A6NGW2 1772 aa17.3■□□□□ 0.36
SMIM12-206ENST00000521580 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
SMIM12-206ENST00000521580 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
SMIM12-206ENST00000521580 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
SMIM12-206ENST00000521580 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
SMIM12-206ENST00000521580 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
SMIM12-206ENST00000521580 PDE1AP54750 535 aa17.29■□□□□ 0.36
SMIM12-206ENST00000521580 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
SMIM12-206ENST00000521580 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
SMIM12-206ENST00000521580 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
SMIM12-206ENST00000521580 PXDNLA1KZ92 1463 aa17.28■□□□□ 0.36
SMIM12-206ENST00000521580 NBPF7P0C2Y1 421 aaPredicted RBP17.28■□□□□ 0.36
SMIM12-206ENST00000521580 BEND3Q5T5X7 828 aa17.28■□□□□ 0.36
SMIM12-206ENST00000521580 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
SMIM12-206ENST00000521580 CACNA1FO60840 1977 aa17.27■□□□□ 0.36
SMIM12-206ENST00000521580 BRINP3Q76B58 766 aa17.27■□□□□ 0.36
SMIM12-206ENST00000521580 PPP1R42Q7Z4L9 355 aa17.27■□□□□ 0.36
SMIM12-206ENST00000521580 RGPD5Q99666 1765 aa17.27■□□□□ 0.36
SMIM12-206ENST00000521580 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.36
SMIM12-206ENST00000521580 PHKG2P15735 406 aa17.27■□□□□ 0.36
SMIM12-206ENST00000521580 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
SMIM12-206ENST00000521580 AIMP1Q12904 312 aaKnown RBP17.27■□□□□ 0.35
SMIM12-206ENST00000521580 MAP3K2Q9Y2U5 619 aa17.27■□□□□ 0.35
SMIM12-206ENST00000521580 OVOS2A0A0G2JMS6 1433 aa17.26■□□□□ 0.35
SMIM12-206ENST00000521580 SURF6O75683 361 aaKnown RBP17.26■□□□□ 0.35
SMIM12-206ENST00000521580 IFNL2Q8IZJ0 200 aa17.26■□□□□ 0.35
SMIM12-206ENST00000521580 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
SMIM12-206ENST00000521580 SLC52A2Q9HAB3 445 aa17.26■□□□□ 0.35
SMIM12-206ENST00000521580 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
SMIM12-206ENST00000521580 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
SMIM12-206ENST00000521580 IL1RAPL2Q9NP60 686 aa17.26■□□□□ 0.35
SMIM12-206ENST00000521580 ADCY9O60503 1353 aa17.25■□□□□ 0.35
SMIM12-206ENST00000521580 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
SMIM12-206ENST00000521580 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
SMIM12-206ENST00000521580 KIF2CQ99661 725 aa17.25■□□□□ 0.35
SMIM12-206ENST00000521580 MX1P20591 662 aa17.25■□□□□ 0.35
SMIM12-206ENST00000521580 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
SMIM12-206ENST00000521580 PRDM11Q9NQV5 511 aa17.25■□□□□ 0.35
SMIM12-206ENST00000521580 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
SMIM12-206ENST00000521580 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms