RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 RGPD5Q99666 1765 aa17.76■□□□□ 0.43
SPIDR-214ENST00000521550 API5Q9BZZ5 524 aaKnown RBP17.76■□□□□ 0.43
SPIDR-214ENST00000521550 CRB1P82279 1406 aa17.76■□□□□ 0.43
SPIDR-214ENST00000521550 RGPD1P0DJD0 1748 aa17.75■□□□□ 0.43
SPIDR-214ENST00000521550 ARHGEF25Q86VW2 580 aa17.75■□□□□ 0.43
SPIDR-214ENST00000521550 TMEM57Q8N5G2 664 aa17.75■□□□□ 0.43
SPIDR-214ENST00000521550 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
SPIDR-214ENST00000521550 PDZRN3Q9UPQ7 1066 aa17.75■□□□□ 0.43
SPIDR-214ENST00000521550 MRPL50Q8N5N7 158 aaKnown RBP17.75■□□□□ 0.43
SPIDR-214ENST00000521550 THUMPD2Q9BTF0 503 aaKnown RBP17.75■□□□□ 0.43
SPIDR-214ENST00000521550 DLG5Q8TDM6 1919 aa17.74■□□□□ 0.43
SPIDR-214ENST00000521550 HSP90AB2PQ58FF8 381 aa17.74■□□□□ 0.43
SPIDR-214ENST00000521550 RTF1Q92541 710 aaKnown RBP17.74■□□□□ 0.43
SPIDR-214ENST00000521550 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
SPIDR-214ENST00000521550 USP54Q70EL1 1684 aa17.74■□□□□ 0.43
SPIDR-214ENST00000521550 MAP3K19Q56UN5 1328 aa17.73■□□□□ 0.43
SPIDR-214ENST00000521550 NFAT5O94916 1531 aa17.73■□□□□ 0.43
SPIDR-214ENST00000521550 BAG6P46379 1132 aa17.73■□□□□ 0.43
SPIDR-214ENST00000521550 ZBTB40Q9NUA8 1239 aa17.73■□□□□ 0.43
SPIDR-214ENST00000521550 FAM196AQ6ZSG2 479 aa17.72■□□□□ 0.43
SPIDR-214ENST00000521550 TOM1L2Q6ZVM7 507 aa17.72■□□□□ 0.43
SPIDR-214ENST00000521550 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
SPIDR-214ENST00000521550 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
SPIDR-214ENST00000521550 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.43
SPIDR-214ENST00000521550 VIRMAQ69YN4 1812 aaKnown RBP17.71■□□□□ 0.43
SPIDR-214ENST00000521550 LTN1O94822 1766 aa17.7■□□□□ 0.42
SPIDR-214ENST00000521550 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
SPIDR-214ENST00000521550 AEBP1Q8IUX7 1158 aa17.7■□□□□ 0.42
SPIDR-214ENST00000521550 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
SPIDR-214ENST00000521550 PEAK1Q9H792 1746 aa17.7■□□□□ 0.42
SPIDR-214ENST00000521550 TNS1Q9HBL0 1735 aaKnown RBP17.7■□□□□ 0.42
SPIDR-214ENST00000521550 ABCC6O95255 1503 aa17.69■□□□□ 0.42
SPIDR-214ENST00000521550 CSB-PGBD3P0DP91 1061 aa17.69■□□□□ 0.42
SPIDR-214ENST00000521550 CHL1O00533 1208 aa17.68■□□□□ 0.42
SPIDR-214ENST00000521550 SMC5Q8IY18 1101 aa17.68■□□□□ 0.42
SPIDR-214ENST00000521550 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
SPIDR-214ENST00000521550 WNK3Q9BYP7 1800 aa17.68■□□□□ 0.42
SPIDR-214ENST00000521550 ELL2O00472 640 aaPredicted RBP17.68■□□□□ 0.42
SPIDR-214ENST00000521550 TRIM37O94972 964 aa17.68■□□□□ 0.42
SPIDR-214ENST00000521550 KDRP35968 1356 aa17.67■□□□□ 0.42
SPIDR-214ENST00000521550 EN1Q05925 392 aaPredicted RBP17.67■□□□□ 0.42
SPIDR-214ENST00000521550 C8orf58Q8NAV2 365 aa17.67■□□□□ 0.42
SPIDR-214ENST00000521550 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
SPIDR-214ENST00000521550 ABCC4O15439 1325 aa17.67■□□□□ 0.42
SPIDR-214ENST00000521550 IGSF1Q8N6C5 1336 aa17.67■□□□□ 0.42
SPIDR-214ENST00000521550 DCTN1Q14203 1278 aa17.66■□□□□ 0.42
SPIDR-214ENST00000521550 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
SPIDR-214ENST00000521550 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
SPIDR-214ENST00000521550 DDB1Q16531 1140 aa17.65■□□□□ 0.42
SPIDR-214ENST00000521550 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
SPIDR-214ENST00000521550 DISP2A7MBM2 1401 aa17.65■□□□□ 0.42
SPIDR-214ENST00000521550 ZBTB7BO15156 539 aaPredicted RBP17.65■□□□□ 0.42
SPIDR-214ENST00000521550 BECN1Q14457 450 aa17.65■□□□□ 0.42
SPIDR-214ENST00000521550 CDCA7Q9BWT1 371 aaPredicted RBP17.65■□□□□ 0.42
SPIDR-214ENST00000521550 MCM10Q7L590 875 aa17.64■□□□□ 0.41
SPIDR-214ENST00000521550 PTPRCP08575 1304 aa17.64■□□□□ 0.41
SPIDR-214ENST00000521550 HOXC9P31274 260 aa17.63■□□□□ 0.41
SPIDR-214ENST00000521550 EYA1Q99502 592 aa17.63■□□□□ 0.41
SPIDR-214ENST00000521550 APBA3O96018 575 aa17.63■□□□□ 0.41
SPIDR-214ENST00000521550 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
SPIDR-214ENST00000521550 ERBB3P21860 1342 aa17.62■□□□□ 0.41
SPIDR-214ENST00000521550 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
SPIDR-214ENST00000521550 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
SPIDR-214ENST00000521550 EIF5BO60841 1220 aaKnown RBP17.61■□□□□ 0.41
SPIDR-214ENST00000521550 NUCB1Q02818 461 aa17.61■□□□□ 0.41
SPIDR-214ENST00000521550 NBR1Q14596 966 aa17.61■□□□□ 0.41
SPIDR-214ENST00000521550 TSPYL4Q9UJ04 414 aa17.61■□□□□ 0.41
SPIDR-214ENST00000521550 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
SPIDR-214ENST00000521550 EZH2Q15910 746 aaKnown RBP17.61■□□□□ 0.41
SPIDR-214ENST00000521550 BABAM1Q9NWV8 329 aa17.61■□□□□ 0.41
SPIDR-214ENST00000521550 GNAT3A8MTJ3 354 aa17.6■□□□□ 0.41
SPIDR-214ENST00000521550 NLRP2Q9NX02 1062 aa17.6■□□□□ 0.41
SPIDR-214ENST00000521550 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
SPIDR-214ENST00000521550 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
SPIDR-214ENST00000521550 CAMKK2Q96RR4 588 aa17.59■□□□□ 0.41
SPIDR-214ENST00000521550 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
SPIDR-214ENST00000521550 ANKRD24Q8TF21 1146 aa17.58■□□□□ 0.41
SPIDR-214ENST00000521550 EXOC5O00471 708 aa17.58■□□□□ 0.4
SPIDR-214ENST00000521550 IP6K1Q92551 441 aa17.58■□□□□ 0.4
SPIDR-214ENST00000521550 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
SPIDR-214ENST00000521550 PSDA5PKW4 1024 aaPredicted RBP17.56■□□□□ 0.4
SPIDR-214ENST00000521550 MARCH10Q8NA82 808 aaPredicted RBP17.56■□□□□ 0.4
SPIDR-214ENST00000521550 MAP3K5Q99683 1374 aa17.56■□□□□ 0.4
SPIDR-214ENST00000521550 FAM208AQ9UK61 1670 aaKnown RBP17.55■□□□□ 0.4
SPIDR-214ENST00000521550 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
SPIDR-214ENST00000521550 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-214ENST00000521550 RREB1Q92766 1687 aa17.55■□□□□ 0.4
SPIDR-214ENST00000521550 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
SPIDR-214ENST00000521550 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
SPIDR-214ENST00000521550 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
SPIDR-214ENST00000521550 TNS2Q63HR2 1409 aa17.54■□□□□ 0.4
SPIDR-214ENST00000521550 KAT6BQ8WYB5 2073 aa17.54■□□□□ 0.4
SPIDR-214ENST00000521550 IL2RBP14784 551 aa17.54■□□□□ 0.4
SPIDR-214ENST00000521550 CCT4P50991 539 aaKnown RBP17.54■□□□□ 0.4
SPIDR-214ENST00000521550 LTV1Q96GA3 475 aaPredicted RBP17.54■□□□□ 0.4
SPIDR-214ENST00000521550 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
SPIDR-214ENST00000521550 BCL9O00512 1426 aa17.53■□□□□ 0.4
SPIDR-214ENST00000521550 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
SPIDR-214ENST00000521550 NUP188Q5SRE5 1749 aa17.53■□□□□ 0.4
SPIDR-214ENST00000521550 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms