RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CAMK4Q16566 473 aa15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 EFCAB6Q5THR3 1501 aa15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 CWC27Q6UX04 472 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 ZNF771Q7L3S4 317 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 CCDC83Q8IWF9 413 aa15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 ADGRB2O60241 1585 aa15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 FAM135BQ49AJ0 1406 aa15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 GNAI3P08754 354 aa15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 CPA1P15085 419 aa15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC9-208ENST00000520857 PTPRCP08575 1304 aa15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 STX6O43752 255 aa15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 LETM1O95202 739 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 INTS4Q96HW7 963 aaKnown RBP15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 LRRC7Q96NW7 1537 aa15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 ZFYVE9O95405 1425 aa15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 UVSSAQ2YD98 709 aa15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 LRRFIP2Q9Y608 721 aaKnown RBP15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 PIK3R4Q99570 1358 aa15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 UBTFL1P0CB47 393 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-208ENST00000520857 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
TRAPPC9-208ENST00000520857 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-208ENST00000520857 ZSCAN22P10073 491 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC9-208ENST00000520857 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-208ENST00000520857 CASTP20810 708 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-208ENST00000520857 UBE2HP62256 183 aa15.37■□□□□ 0.05
TRAPPC9-208ENST00000520857 UNC5CLQ8IV45 518 aa15.37■□□□□ 0.05
TRAPPC9-208ENST00000520857 PRDM4Q9UKN5 801 aa15.37■□□□□ 0.05
TRAPPC9-208ENST00000520857 PNMA6EA0A0J9YXQ4 647 aa15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 TRIM5Q9C035 493 aa15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 FOXO3O43524 673 aa15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 KDM4AO75164 1064 aa15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 CCDC192P0DO97 292 aa15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 EIF2S2P20042 333 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 DNM1Q05193 864 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 C16orf45Q96MC5 204 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 ANAPC15P60006 121 aa15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 NUDT16Q96DE0 195 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-208ENST00000520857 MROH2AA6NES4 1674 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 SYT1P21579 422 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 CUL4AQ13619 759 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 CKAP2LQ8IYA6 745 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 NRXN1Q9ULB1 1477 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 ADGRB1O14514 1584 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 SETBP1Q9Y6X0 1596 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 GLI2P10070 1586 aa15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 RIOK3O14730 519 aaKnown RBP15.35■□□□□ 0.05
TRAPPC9-208ENST00000520857 U2AF2P26368 475 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAPPC9-208ENST00000520857 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
TRAPPC9-208ENST00000520857 ADGRB3O60242 1522 aa15.34■□□□□ 0.05
TRAPPC9-208ENST00000520857 AK2P54819 239 aa15.34■□□□□ 0.05
TRAPPC9-208ENST00000520857 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-208ENST00000520857 JAKMIP1Q96N16 626 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-208ENST00000520857 LIMCH1Q9UPQ0 1083 aa15.34■□□□□ 0.05
TRAPPC9-208ENST00000520857 COL3A1P02461 1466 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-208ENST00000520857 CHL1O00533 1208 aa15.33■□□□□ 0.05
TRAPPC9-208ENST00000520857 AMPHP49418 695 aa15.33■□□□□ 0.04
TRAPPC9-208ENST00000520857 FLIIQ13045 1269 aa15.33■□□□□ 0.04
TRAPPC9-208ENST00000520857 C14orf37Q86TY3 774 aa15.33■□□□□ 0.04
TRAPPC9-208ENST00000520857 F13A1P00488 732 aa15.33■□□□□ 0.04
TRAPPC9-208ENST00000520857 GJB2P29033 226 aa15.33■□□□□ 0.04
TRAPPC9-208ENST00000520857 PYCARDQ9ULZ3 195 aa15.33■□□□□ 0.04
TRAPPC9-208ENST00000520857 CNTROBQ8N137 903 aa15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 BICD2Q8TD16 824 aa15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 PPRC1Q5VV67 1664 aaKnown RBP15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 PTGS1P23219 599 aa15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 CCDC61Q9Y6R9 512 aa15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 SRGAP3O43295 1099 aa15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 NECAB1Q8N987 351 aa15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 CHD1O14646 1710 aa15.32■□□□□ 0.04
TRAPPC9-208ENST00000520857 TPD52L1Q16890 204 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 CCDC30Q5VVM6 783 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 LARP1BQ659C4 914 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 WASLO00401 505 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 PRPF40BQ6NWY9 871 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 FAM173BQ6P4H8 233 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 NUP62CLQ9H1M0 184 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 ATP10DQ9P241 1426 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 TPM3P06753 285 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 ATP2B3Q16720 1220 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 TFIP11Q9UBB9 837 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 KIF24Q5T7B8 1368 aa15.31■□□□□ 0.04
TRAPPC9-208ENST00000520857 NPHP1O15259 732 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 FGD1P98174 961 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 CCDC186Q7Z3E2 898 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 TNMDQ9H2S6 317 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 DMTNQ08495 405 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 MAP3K11Q16584 847 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 ZNF710Q8N1W2 664 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 OSBPL3Q9H4L5 887 aa15.3■□□□□ 0.04
TRAPPC9-208ENST00000520857 NAP1L2Q9ULW6 460 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms