RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 MRC1P22897 1456 aa21.64■■□□□ 1.06
TNPO1-212ENST00000520850 LOC102724428A0A0B4J2F2 783 aa21.64■■□□□ 1.05
TNPO1-212ENST00000520850 SIK1P57059 783 aa21.64■■□□□ 1.05
TNPO1-212ENST00000520850 CEMIPQ8WUJ3 1361 aa21.63■■□□□ 1.05
TNPO1-212ENST00000520850 ZNF831Q5JPB2 1677 aa21.63■■□□□ 1.05
TNPO1-212ENST00000520850 IL17REQ8NFR9 667 aa21.63■■□□□ 1.05
TNPO1-212ENST00000520850 ANP32CO43423 234 aa21.6■■□□□ 1.05
TNPO1-212ENST00000520850 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
TNPO1-212ENST00000520850 QSER1Q2KHR3 1735 aa21.58■■□□□ 1.05
TNPO1-212ENST00000520850 VIRMAQ69YN4 1812 aaKnown RBP21.58■■□□□ 1.05
TNPO1-212ENST00000520850 ATP6V1AP38606 617 aa21.58■■□□□ 1.05
TNPO1-212ENST00000520850 KCNQ4P56696 695 aa21.58■■□□□ 1.05
TNPO1-212ENST00000520850 SLC16A10Q8TF71 515 aa21.58■■□□□ 1.05
TNPO1-212ENST00000520850 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.05
TNPO1-212ENST00000520850 TAF1LQ8IZX4 1826 aa21.57■■□□□ 1.04
TNPO1-212ENST00000520850 TEFQ10587 303 aa21.57■■□□□ 1.04
TNPO1-212ENST00000520850 WDR43Q15061 677 aaKnown RBP eCLIP21.57■■□□□ 1.04
TNPO1-212ENST00000520850 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
TNPO1-212ENST00000520850 FLAD1Q8NFF5 587 aa21.57■■□□□ 1.04
TNPO1-212ENST00000520850 RC3H1Q5TC82 1133 aaKnown RBP21.56■■□□□ 1.04
TNPO1-212ENST00000520850 VSIG10Q8N0Z9 540 aa21.56■■□□□ 1.04
TNPO1-212ENST00000520850 SLC4A9Q96Q91 983 aa21.56■■□□□ 1.04
TNPO1-212ENST00000520850 TFCP2L1Q9NZI6 479 aa21.56■■□□□ 1.04
TNPO1-212ENST00000520850 SRCAPQ6ZRS2 3230 aa21.56■■□□□ 1.04
TNPO1-212ENST00000520850 C5P01031 1676 aa21.56■■□□□ 1.04
TNPO1-212ENST00000520850 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
TNPO1-212ENST00000520850 ADAMTS8Q9UP79 889 aa21.55■■□□□ 1.04
TNPO1-212ENST00000520850 CASZ1Q86V15 1759 aa21.55■■□□□ 1.04
TNPO1-212ENST00000520850 ITPK1Q13572 414 aa21.54■■□□□ 1.04
TNPO1-212ENST00000520850 RUNDC1Q96C34 613 aa21.54■■□□□ 1.04
TNPO1-212ENST00000520850 LRP5O75197 1615 aa21.54■■□□□ 1.04
TNPO1-212ENST00000520850 RBM42Q9BTD8 480 aaKnown RBP21.53■■□□□ 1.04
TNPO1-212ENST00000520850 SPON1Q9HCB6 807 aa21.53■■□□□ 1.04
TNPO1-212ENST00000520850 CICQ96RK0 1608 aaPredicted RBP21.53■■□□□ 1.04
TNPO1-212ENST00000520850 PNPLA7Q6ZV29 1317 aa21.53■■□□□ 1.04
TNPO1-212ENST00000520850 SIPA1L3O60292 1781 aaPredicted RBP21.52■■□□□ 1.04
TNPO1-212ENST00000520850 ZNF790Q6PG37 636 aa21.52■■□□□ 1.04
TNPO1-212ENST00000520850 LINC00116Q8NCU8 138 aa21.52■■□□□ 1.04
TNPO1-212ENST00000520850 MTFR1LQ9H019 292 aa21.52■■□□□ 1.04
TNPO1-212ENST00000520850 C4BP0C0L5 1744 aa21.52■■□□□ 1.03
TNPO1-212ENST00000520850 CNTNAP4Q9C0A0 1308 aa21.51■■□□□ 1.03
TNPO1-212ENST00000520850 PTCD1O75127 700 aaKnown RBP21.5■■□□□ 1.03
TNPO1-212ENST00000520850 SSFA2P28290 1259 aa21.5■■□□□ 1.03
TNPO1-212ENST00000520850 TMPOP42166 694 aaKnown RBP21.5■■□□□ 1.03
TNPO1-212ENST00000520850 TAF7Q15545 349 aaPredicted RBP21.5■■□□□ 1.03
TNPO1-212ENST00000520850 AK7Q96M32 723 aa21.5■■□□□ 1.03
TNPO1-212ENST00000520850 PDGFDQ9GZP0 370 aaPredicted RBP21.5■■□□□ 1.03
TNPO1-212ENST00000520850 BTBD11A6QL63 1104 aa21.49■■□□□ 1.03
TNPO1-212ENST00000520850 LMOD3Q0VAK6 560 aa21.49■■□□□ 1.03
TNPO1-212ENST00000520850 SLC39A6Q13433 755 aa21.49■■□□□ 1.03
TNPO1-212ENST00000520850 MCM10Q7L590 875 aa21.49■■□□□ 1.03
TNPO1-212ENST00000520850 TTC5Q8N0Z6 440 aa21.49■■□□□ 1.03
TNPO1-212ENST00000520850 TEX13AQ9BXU3 409 aaPredicted RBP21.49■■□□□ 1.03
TNPO1-212ENST00000520850 RIPK4P57078 832 aa21.48■■□□□ 1.03
TNPO1-212ENST00000520850 PNISRQ8TF01 805 aaKnown RBP21.48■■□□□ 1.03
TNPO1-212ENST00000520850 KCPQ6ZWJ8 1503 aa21.48■■□□□ 1.03
TNPO1-212ENST00000520850 DLG5Q8TDM6 1919 aa21.47■■□□□ 1.03
TNPO1-212ENST00000520850 UBR2Q8IWV8 1755 aa21.47■■□□□ 1.03
TNPO1-212ENST00000520850 ADRA2BP18089 450 aa21.47■■□□□ 1.03
TNPO1-212ENST00000520850 COL23A1Q86Y22 540 aaPredicted RBP21.47■■□□□ 1.03
TNPO1-212ENST00000520850 BABAM1Q9NWV8 329 aa21.47■■□□□ 1.03
TNPO1-212ENST00000520850 COL5A3P25940 1745 aaPredicted RBP21.46■■□□□ 1.03
TNPO1-212ENST00000520850 RPS6KA4O75676 772 aa21.46■■□□□ 1.03
TNPO1-212ENST00000520850 DCTN1Q14203 1278 aa21.45■■□□□ 1.02
TNPO1-212ENST00000520850 CCDC184Q52MB2 194 aa21.45■■□□□ 1.02
TNPO1-212ENST00000520850 FMNL2Q96PY5 1086 aa21.45■■□□□ 1.02
TNPO1-212ENST00000520850 SGIP1Q9BQI5 828 aa21.45■■□□□ 1.02
TNPO1-212ENST00000520850 RTCBQ9Y3I0 505 aaKnown RBP21.45■■□□□ 1.02
TNPO1-212ENST00000520850 TUBGCP6Q96RT7 1819 aa21.45■■□□□ 1.02
TNPO1-212ENST00000520850 UBR3Q6ZT12 1888 aa21.45■■□□□ 1.02
TNPO1-212ENST00000520850 PTGER2P43116 358 aa21.44■■□□□ 1.02
TNPO1-212ENST00000520850 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
TNPO1-212ENST00000520850 ZNF496Q96IT1 587 aaPredicted RBP21.44■■□□□ 1.02
TNPO1-212ENST00000520850 HEG1Q9ULI3 1381 aa21.44■■□□□ 1.02
TNPO1-212ENST00000520850 COL24A1Q17RW2 1714 aa21.43■■□□□ 1.02
TNPO1-212ENST00000520850 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.43■■□□□ 1.02
TNPO1-212ENST00000520850 ZBTB7AO95365 584 aa21.43■■□□□ 1.02
TNPO1-212ENST00000520850 CYP19A1P11511 503 aaPredicted RBP21.43■■□□□ 1.02
TNPO1-212ENST00000520850 MRS2Q9HD23 443 aa21.43■■□□□ 1.02
TNPO1-212ENST00000520850 GNPATO15228 680 aa21.42■■□□□ 1.02
TNPO1-212ENST00000520850 STARD3NLO95772 234 aa21.42■■□□□ 1.02
TNPO1-212ENST00000520850 CRKLP46109 303 aaKnown RBP21.42■■□□□ 1.02
TNPO1-212ENST00000520850 TJP1Q07157 1748 aa21.42■■□□□ 1.02
TNPO1-212ENST00000520850 TRAPPC3LQ5T215 181 aa21.42■■□□□ 1.02
TNPO1-212ENST00000520850 DNAJC10Q8IXB1 793 aa21.42■■□□□ 1.02
TNPO1-212ENST00000520850 CCDC146Q8IYE0 955 aa21.42■■□□□ 1.02
TNPO1-212ENST00000520850 INTS5Q6P9B9 1019 aaKnown RBP21.41■■□□□ 1.02
TNPO1-212ENST00000520850 MYH14Q7Z406 1995 aaKnown RBP21.41■■□□□ 1.02
TNPO1-212ENST00000520850 AMIGO3Q86WK7 504 aa21.4■■□□□ 1.02
TNPO1-212ENST00000520850 CCDC87Q9NVE4 849 aa21.4■■□□□ 1.02
TNPO1-212ENST00000520850 TRIM35Q9UPQ4 493 aa21.4■■□□□ 1.02
TNPO1-212ENST00000520850 ATF5Q9Y2D1 282 aaPredicted RBP21.4■■□□□ 1.02
TNPO1-212ENST00000520850 KCNQ3O43525 872 aa21.38■■□□□ 1.01
TNPO1-212ENST00000520850 SNRPA1P09661 255 aaKnown RBP21.38■■□□□ 1.01
TNPO1-212ENST00000520850 ARHGEF1Q92888 912 aaKnown RBP21.38■■□□□ 1.01
TNPO1-212ENST00000520850 APAF1O14727 1248 aa21.36■■□□□ 1.01
TNPO1-212ENST00000520850 MSH5O43196 834 aa21.36■■□□□ 1.01
TNPO1-212ENST00000520850 POLD1P28340 1107 aa21.36■■□□□ 1.01
TNPO1-212ENST00000520850 NEUROD2Q15784 382 aa21.35■■□□□ 1.01
TNPO1-212ENST00000520850 CCDC27Q2M243 656 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms