RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 U2AF1Q01081 240 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAPPC9-207ENST00000520532 PROM2Q8N271 834 aa9.88□□□□□ -0.83
TRAPPC9-207ENST00000520532 SCN7AQ01118 1682 aa9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 GNAT3A8MTJ3 354 aa9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 HTATSF1O43719 755 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 MTHFSDQ2M296 383 aaKnown RBP9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 MPRIPQ6WCQ1 1025 aa9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 PIGBQ92521 554 aa9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 ANO8Q9HCE9 1232 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 STK32BQ9NY57 414 aa9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 CCNL1Q9UK58 526 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC9-207ENST00000520532 CNGB1Q14028 1251 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC9-207ENST00000520532 SLC15A2Q16348 729 aa9.86□□□□□ -0.83
TRAPPC9-207ENST00000520532 SLC52A2Q9HAB3 445 aa9.86□□□□□ -0.83
TRAPPC9-207ENST00000520532 BCORQ6W2J9 1755 aa9.86□□□□□ -0.83
TRAPPC9-207ENST00000520532 MAPK8IP3Q9UPT6 1336 aa9.85□□□□□ -0.83
TRAPPC9-207ENST00000520532 RNMTO43148 476 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-207ENST00000520532 CABP4P57796 275 aa9.85□□□□□ -0.83
TRAPPC9-207ENST00000520532 R3HDM1Q15032 1099 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-207ENST00000520532 AKT1S1Q96B36 256 aa9.85□□□□□ -0.83
TRAPPC9-207ENST00000520532 LRRC4BQ9NT99 713 aa9.85□□□□□ -0.83
TRAPPC9-207ENST00000520532 MYH14Q7Z406 1995 aaKnown RBP9.84□□□□□ -0.83
TRAPPC9-207ENST00000520532 LOC102724428A0A0B4J2F2 783 aa9.84□□□□□ -0.83
TRAPPC9-207ENST00000520532 SIK1P57059 783 aa9.84□□□□□ -0.83
TRAPPC9-207ENST00000520532 PLEKHF1Q96S99 279 aa9.84□□□□□ -0.83
TRAPPC9-207ENST00000520532 CNTNAP4Q9C0A0 1308 aa9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 TEFQ10587 303 aa9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 WDR43Q15061 677 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 ZNF827Q17R98 1081 aa9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 FLAD1Q8NFF5 587 aa9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 SLC16A10Q8TF71 515 aa9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 ATG3Q9NT62 314 aa9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 KIF13BQ9NQT8 1826 aa9.83□□□□□ -0.84
TRAPPC9-207ENST00000520532 PSDA5PKW4 1024 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC9-207ENST00000520532 ANP32CO43423 234 aa9.82□□□□□ -0.84
TRAPPC9-207ENST00000520532 LMOD3Q0VAK6 560 aa9.82□□□□□ -0.84
TRAPPC9-207ENST00000520532 NFE2L2Q16236 605 aa9.82□□□□□ -0.84
TRAPPC9-207ENST00000520532 RTF1Q92541 710 aaKnown RBP9.82□□□□□ -0.84
TRAPPC9-207ENST00000520532 PHACTR3Q96KR7 559 aa9.82□□□□□ -0.84
TRAPPC9-207ENST00000520532 ASAP1Q9ULH1 1129 aa9.82□□□□□ -0.84
TRAPPC9-207ENST00000520532 PNPLA7Q6ZV29 1317 aa9.82□□□□□ -0.84
TRAPPC9-207ENST00000520532 ADRA2BP18089 450 aa9.81□□□□□ -0.84
TRAPPC9-207ENST00000520532 SSFA2P28290 1259 aa9.81□□□□□ -0.84
TRAPPC9-207ENST00000520532 NFATC2IPQ8NCF5 419 aa9.81□□□□□ -0.84
TRAPPC9-207ENST00000520532 MTFR1LQ9H019 292 aa9.81□□□□□ -0.84
TRAPPC9-207ENST00000520532 HEG1Q9ULI3 1381 aa9.8□□□□□ -0.84
TRAPPC9-207ENST00000520532 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
TRAPPC9-207ENST00000520532 RC3H1Q5TC82 1133 aaKnown RBP9.8□□□□□ -0.84
TRAPPC9-207ENST00000520532 TTC5Q8N0Z6 440 aa9.8□□□□□ -0.84
TRAPPC9-207ENST00000520532 AK7Q96M32 723 aa9.8□□□□□ -0.84
TRAPPC9-207ENST00000520532 SPON1Q9HCB6 807 aa9.8□□□□□ -0.84
TRAPPC9-207ENST00000520532 NRXN2Q9P2S2 1712 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 ITPK1Q13572 414 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 ZNF790Q6PG37 636 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 LINC00116Q8NCU8 138 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 IL17REQ8NFR9 667 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 PNISRQ8TF01 805 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 RUNDC1Q96C34 613 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 LGR6Q9HBX8 967 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 BABAM1Q9NWV8 329 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 TFCP2L1Q9NZI6 479 aa9.79□□□□□ -0.84
TRAPPC9-207ENST00000520532 NCBP3Q53F19 620 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-207ENST00000520532 TEX13AQ9BXU3 409 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC9-207ENST00000520532 FMNL2Q96PY5 1086 aa9.77□□□□□ -0.85
TRAPPC9-207ENST00000520532 SLC4A9Q96Q91 983 aa9.77□□□□□ -0.85
TRAPPC9-207ENST00000520532 DLEC1Q9Y238 1755 aa9.77□□□□□ -0.85
TRAPPC9-207ENST00000520532 COL15A1P39059 1388 aa9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 KIAA1551Q9HCM1 1747 aa9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 ANKRD36CQ5JPF3 1778 aa9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 BTBD11A6QL63 1104 aa9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 GNPATO15228 680 aa9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 TMPOP42166 694 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 SGIP1Q9BQI5 828 aa9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 ADAMTS8Q9UP79 889 aa9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-207ENST00000520532 GOLGB1Q14789 3259 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 BRCA1P38398 1863 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 PTCD1O75127 700 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 RPS6KA4O75676 772 aa9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 PTGER2P43116 358 aa9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 CRKLP46109 303 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 KCNQ4P56696 695 aa9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 CALD1Q05682 793 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 TAF7Q15545 349 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 MCM10Q7L590 875 aa9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 MRS2Q9HD23 443 aa9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 CCDC87Q9NVE4 849 aa9.75□□□□□ -0.85
TRAPPC9-207ENST00000520532 RGL2O15211 777 aa9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 STARD3NLO95772 234 aa9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 CYP19A1P11511 503 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 POLD1P28340 1107 aa9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 NGEFQ8N5V2 710 aa9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 ZNF496Q96IT1 587 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 AFDNP55196 1824 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 ERBB4Q15303 1308 aa9.74□□□□□ -0.85
TRAPPC9-207ENST00000520532 RIPK4P57078 832 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms