RNA–Protein interactions for RNA: ENST00000520420.5

CREBRF-203, Transcript of CREB3 regulatory factor, humanhuman

TSL 1 (best) BASIC

Gene CREBRF, Length 1,660 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-203ENST00000520420 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
CREBRF-203ENST00000520420 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
CREBRF-203ENST00000520420 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
CREBRF-203ENST00000520420 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
CREBRF-203ENST00000520420 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
CREBRF-203ENST00000520420 CEMIPQ8WUJ3 1361 aa16.9■□□□□ 0.3
CREBRF-203ENST00000520420 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
CREBRF-203ENST00000520420 TUBGCP6Q96RT7 1819 aa16.89■□□□□ 0.29
CREBRF-203ENST00000520420 LOC102724428A0A0B4J2F2 783 aa16.88■□□□□ 0.29
CREBRF-203ENST00000520420 SIK1P57059 783 aa16.88■□□□□ 0.29
CREBRF-203ENST00000520420 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
CREBRF-203ENST00000520420 PNNQ9H307 717 aaKnown RBP16.88■□□□□ 0.29
CREBRF-203ENST00000520420 SRCAPQ6ZRS2 3230 aa16.88■□□□□ 0.29
CREBRF-203ENST00000520420 ZNF831Q5JPB2 1677 aa16.88■□□□□ 0.29
CREBRF-203ENST00000520420 MAPK8IP3Q9UPT6 1336 aa16.88■□□□□ 0.29
CREBRF-203ENST00000520420 NEFMP07197 916 aa16.88■□□□□ 0.29
CREBRF-203ENST00000520420 STK32BQ9NY57 414 aa16.88■□□□□ 0.29
CREBRF-203ENST00000520420 CASZ1Q86V15 1759 aa16.87■□□□□ 0.29
CREBRF-203ENST00000520420 MCM10Q7L590 875 aa16.87■□□□□ 0.29
CREBRF-203ENST00000520420 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
CREBRF-203ENST00000520420 AKT1S1Q96B36 256 aa16.87■□□□□ 0.29
CREBRF-203ENST00000520420 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
CREBRF-203ENST00000520420 C4BP0C0L5 1744 aa16.86■□□□□ 0.29
CREBRF-203ENST00000520420 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
CREBRF-203ENST00000520420 PDGFDQ9GZP0 370 aaPredicted RBP16.86■□□□□ 0.29
CREBRF-203ENST00000520420 UBR2Q8IWV8 1755 aa16.86■□□□□ 0.29
CREBRF-203ENST00000520420 QSER1Q2KHR3 1735 aa16.86■□□□□ 0.29
CREBRF-203ENST00000520420 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
CREBRF-203ENST00000520420 ITPK1Q13572 414 aa16.85■□□□□ 0.29
CREBRF-203ENST00000520420 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
CREBRF-203ENST00000520420 KCPQ6ZWJ8 1503 aa16.85■□□□□ 0.29
CREBRF-203ENST00000520420 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
CREBRF-203ENST00000520420 TEFQ10587 303 aa16.85■□□□□ 0.29
CREBRF-203ENST00000520420 RTF1Q92541 710 aaKnown RBP16.85■□□□□ 0.29
CREBRF-203ENST00000520420 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
CREBRF-203ENST00000520420 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
CREBRF-203ENST00000520420 TJP1Q07157 1748 aa16.84■□□□□ 0.29
CREBRF-203ENST00000520420 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
CREBRF-203ENST00000520420 ATP6V1AP38606 617 aa16.84■□□□□ 0.29
CREBRF-203ENST00000520420 LINC00116Q8NCU8 138 aa16.84■□□□□ 0.29
CREBRF-203ENST00000520420 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
CREBRF-203ENST00000520420 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
CREBRF-203ENST00000520420 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
CREBRF-203ENST00000520420 TMPOP42166 694 aaKnown RBP16.82■□□□□ 0.28
CREBRF-203ENST00000520420 UBR3Q6ZT12 1888 aa16.82■□□□□ 0.28
CREBRF-203ENST00000520420 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
CREBRF-203ENST00000520420 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
CREBRF-203ENST00000520420 RRP7AQ9Y3A4 280 aaKnown RBP16.81■□□□□ 0.28
CREBRF-203ENST00000520420 PNPLA7Q6ZV29 1317 aa16.81■□□□□ 0.28
CREBRF-203ENST00000520420 RIPK4P57078 832 aa16.81■□□□□ 0.28
CREBRF-203ENST00000520420 THUMPD2Q9BTF0 503 aaKnown RBP16.81■□□□□ 0.28
CREBRF-203ENST00000520420 MYH14Q7Z406 1995 aaKnown RBP16.81■□□□□ 0.28
CREBRF-203ENST00000520420 LRP5O75197 1615 aa16.8■□□□□ 0.28
CREBRF-203ENST00000520420 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
CREBRF-203ENST00000520420 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
CREBRF-203ENST00000520420 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
CREBRF-203ENST00000520420 KCNQ3O43525 872 aa16.78■□□□□ 0.28
CREBRF-203ENST00000520420 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
CREBRF-203ENST00000520420 TTC5Q8N0Z6 440 aa16.78■□□□□ 0.28
CREBRF-203ENST00000520420 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
CREBRF-203ENST00000520420 AK7Q96M32 723 aa16.78■□□□□ 0.28
CREBRF-203ENST00000520420 KDM3BQ7LBC6 1761 aa16.77■□□□□ 0.28
CREBRF-203ENST00000520420 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
CREBRF-203ENST00000520420 SMIM5Q71RC9 77 aa16.77■□□□□ 0.28
CREBRF-203ENST00000520420 APAF1O14727 1248 aa16.76■□□□□ 0.27
CREBRF-203ENST00000520420 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
CREBRF-203ENST00000520420 TAF7Q15545 349 aaPredicted RBP16.76■□□□□ 0.27
CREBRF-203ENST00000520420 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
CREBRF-203ENST00000520420 TRIM35Q9UPQ4 493 aa16.76■□□□□ 0.27
CREBRF-203ENST00000520420 GNPATO15228 680 aa16.75■□□□□ 0.27
CREBRF-203ENST00000520420 COL23A1Q86Y22 540 aaPredicted RBP16.75■□□□□ 0.27
CREBRF-203ENST00000520420 MIS18AQ9NYP9 233 aa16.75■□□□□ 0.27
CREBRF-203ENST00000520420 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
CREBRF-203ENST00000520420 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
CREBRF-203ENST00000520420 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
CREBRF-203ENST00000520420 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
CREBRF-203ENST00000520420 PHF14O94880 888 aa16.74■□□□□ 0.27
CREBRF-203ENST00000520420 CRKLP46109 303 aaKnown RBP16.74■□□□□ 0.27
CREBRF-203ENST00000520420 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
CREBRF-203ENST00000520420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.73■□□□□ 0.27
CREBRF-203ENST00000520420 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
CREBRF-203ENST00000520420 MTFR1LQ9H019 292 aa16.73■□□□□ 0.27
CREBRF-203ENST00000520420 SPON1Q9HCB6 807 aa16.73■□□□□ 0.27
CREBRF-203ENST00000520420 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
CREBRF-203ENST00000520420 SSFA2P28290 1259 aa16.72■□□□□ 0.27
CREBRF-203ENST00000520420 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
CREBRF-203ENST00000520420 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
CREBRF-203ENST00000520420 COL24A1Q17RW2 1714 aa16.72■□□□□ 0.27
CREBRF-203ENST00000520420 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
CREBRF-203ENST00000520420 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
CREBRF-203ENST00000520420 INTS5Q6P9B9 1019 aaKnown RBP16.72■□□□□ 0.27
CREBRF-203ENST00000520420 MSH5O43196 834 aa16.71■□□□□ 0.27
CREBRF-203ENST00000520420 PTGER2P43116 358 aa16.71■□□□□ 0.27
CREBRF-203ENST00000520420 FLAD1Q8NFF5 587 aa16.71■□□□□ 0.27
CREBRF-203ENST00000520420 SLC16A10Q8TF71 515 aa16.71■□□□□ 0.27
CREBRF-203ENST00000520420 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
CREBRF-203ENST00000520420 RPS6KA4O75676 772 aa16.7■□□□□ 0.26
CREBRF-203ENST00000520420 FAM9BQ8IZU0 186 aa16.7■□□□□ 0.26
CREBRF-203ENST00000520420 SGIP1Q9BQI5 828 aa16.7■□□□□ 0.26
CREBRF-203ENST00000520420 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms