RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 SIPA1L3O60292 1781 aaPredicted RBP15.35■□□□□ 0.05
SPIDR-212ENST00000519661 ASAP1Q9ULH1 1129 aa15.35■□□□□ 0.05
SPIDR-212ENST00000519661 LOC102724428A0A0B4J2F2 783 aa15.34■□□□□ 0.05
SPIDR-212ENST00000519661 SIK1P57059 783 aa15.34■□□□□ 0.05
SPIDR-212ENST00000519661 CABP4P57796 275 aa15.34■□□□□ 0.05
SPIDR-212ENST00000519661 NFATC2IPQ8NCF5 419 aa15.34■□□□□ 0.05
SPIDR-212ENST00000519661 LGR6Q9HBX8 967 aa15.34■□□□□ 0.05
SPIDR-212ENST00000519661 CCNL1Q9UK58 526 aaPredicted RBP15.34■□□□□ 0.05
SPIDR-212ENST00000519661 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
SPIDR-212ENST00000519661 UBR2Q8IWV8 1755 aa15.33■□□□□ 0.04
SPIDR-212ENST00000519661 TAF1LQ8IZX4 1826 aa15.33■□□□□ 0.04
SPIDR-212ENST00000519661 KCPQ6ZWJ8 1503 aa15.33■□□□□ 0.04
SPIDR-212ENST00000519661 ZNF827Q17R98 1081 aa15.32■□□□□ 0.04
SPIDR-212ENST00000519661 SLC4A9Q96Q91 983 aa15.32■□□□□ 0.04
SPIDR-212ENST00000519661 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
SPIDR-212ENST00000519661 KAT6BQ8WYB5 2073 aa15.32■□□□□ 0.04
SPIDR-212ENST00000519661 COL24A1Q17RW2 1714 aa15.31■□□□□ 0.04
SPIDR-212ENST00000519661 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
SPIDR-212ENST00000519661 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
SPIDR-212ENST00000519661 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
SPIDR-212ENST00000519661 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
SPIDR-212ENST00000519661 COL5A3P25940 1745 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-212ENST00000519661 RC3H1Q5TC82 1133 aaKnown RBP15.3■□□□□ 0.04
SPIDR-212ENST00000519661 VIRMAQ69YN4 1812 aaKnown RBP15.29■□□□□ 0.04
SPIDR-212ENST00000519661 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
SPIDR-212ENST00000519661 ANP32CO43423 234 aa15.29■□□□□ 0.04
SPIDR-212ENST00000519661 ITPK1Q13572 414 aa15.29■□□□□ 0.04
SPIDR-212ENST00000519661 SLC16A10Q8TF71 515 aa15.29■□□□□ 0.04
SPIDR-212ENST00000519661 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
SPIDR-212ENST00000519661 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
SPIDR-212ENST00000519661 PNISRQ8TF01 805 aaKnown RBP15.28■□□□□ 0.04
SPIDR-212ENST00000519661 RUNDC1Q96C34 613 aa15.28■□□□□ 0.04
SPIDR-212ENST00000519661 TJP1Q07157 1748 aa15.27■□□□□ 0.04
SPIDR-212ENST00000519661 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.04
SPIDR-212ENST00000519661 NEFMP07197 916 aa15.27■□□□□ 0.04
SPIDR-212ENST00000519661 ZNF790Q6PG37 636 aa15.27■□□□□ 0.04
SPIDR-212ENST00000519661 LINC00116Q8NCU8 138 aa15.27■□□□□ 0.04
SPIDR-212ENST00000519661 FLAD1Q8NFF5 587 aa15.27■□□□□ 0.04
SPIDR-212ENST00000519661 SGIP1Q9BQI5 828 aa15.27■□□□□ 0.04
SPIDR-212ENST00000519661 BABAM1Q9NWV8 329 aa15.27■□□□□ 0.04
SPIDR-212ENST00000519661 HEG1Q9ULI3 1381 aa15.26■□□□□ 0.03
SPIDR-212ENST00000519661 MAPK8IP3Q9UPT6 1336 aa15.26■□□□□ 0.03
SPIDR-212ENST00000519661 SSFA2P28290 1259 aa15.26■□□□□ 0.03
SPIDR-212ENST00000519661 TMPOP42166 694 aaKnown RBP15.26■□□□□ 0.03
SPIDR-212ENST00000519661 TEFQ10587 303 aa15.26■□□□□ 0.03
SPIDR-212ENST00000519661 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
SPIDR-212ENST00000519661 TUBGCP6Q96RT7 1819 aa15.26■□□□□ 0.03
SPIDR-212ENST00000519661 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
SPIDR-212ENST00000519661 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
SPIDR-212ENST00000519661 KCNQ4P56696 695 aa15.25■□□□□ 0.03
SPIDR-212ENST00000519661 CCDC184Q52MB2 194 aa15.25■□□□□ 0.03
SPIDR-212ENST00000519661 RTF1Q92541 710 aaKnown RBP15.25■□□□□ 0.03
SPIDR-212ENST00000519661 DLG5Q8TDM6 1919 aa15.24■□□□□ 0.03
SPIDR-212ENST00000519661 ADRA2BP18089 450 aa15.24■□□□□ 0.03
SPIDR-212ENST00000519661 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
SPIDR-212ENST00000519661 MTFR1LQ9H019 292 aa15.24■□□□□ 0.03
SPIDR-212ENST00000519661 PTGER2P43116 358 aa15.23■□□□□ 0.03
SPIDR-212ENST00000519661 TAF7Q15545 349 aaPredicted RBP15.23■□□□□ 0.03
SPIDR-212ENST00000519661 PDGFDQ9GZP0 370 aaPredicted RBP15.23■□□□□ 0.03
SPIDR-212ENST00000519661 MCM10Q7L590 875 aa15.22■□□□□ 0.03
SPIDR-212ENST00000519661 AMIGO3Q86WK7 504 aa15.22■□□□□ 0.03
SPIDR-212ENST00000519661 ZNF496Q96IT1 587 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-212ENST00000519661 TEX13AQ9BXU3 409 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-212ENST00000519661 TFCP2L1Q9NZI6 479 aa15.22■□□□□ 0.03
SPIDR-212ENST00000519661 KDM3BQ7LBC6 1761 aa15.21■□□□□ 0.03
SPIDR-212ENST00000519661 PTCD1O75127 700 aaKnown RBP15.21■□□□□ 0.03
SPIDR-212ENST00000519661 RPS6KA4O75676 772 aa15.21■□□□□ 0.03
SPIDR-212ENST00000519661 CYP19A1P11511 503 aaPredicted RBP15.21■□□□□ 0.03
SPIDR-212ENST00000519661 SLC39A6Q13433 755 aa15.21■□□□□ 0.03
SPIDR-212ENST00000519661 SPON1Q9HCB6 807 aa15.21■□□□□ 0.03
SPIDR-212ENST00000519661 TRIM35Q9UPQ4 493 aa15.21■□□□□ 0.03
SPIDR-212ENST00000519661 MYH14Q7Z406 1995 aaKnown RBP15.2■□□□□ 0.02
SPIDR-212ENST00000519661 BTBD11A6QL63 1104 aa15.2■□□□□ 0.02
SPIDR-212ENST00000519661 RIPK4P57078 832 aa15.2■□□□□ 0.02
SPIDR-212ENST00000519661 CCDC27Q2M243 656 aa15.2■□□□□ 0.02
SPIDR-212ENST00000519661 INTS5Q6P9B9 1019 aaKnown RBP15.2■□□□□ 0.02
SPIDR-212ENST00000519661 COL23A1Q86Y22 540 aaPredicted RBP15.2■□□□□ 0.02
SPIDR-212ENST00000519661 AK7Q96M32 723 aa15.2■□□□□ 0.02
SPIDR-212ENST00000519661 FMNL2Q96PY5 1086 aa15.2■□□□□ 0.02
SPIDR-212ENST00000519661 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
SPIDR-212ENST00000519661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.19■□□□□ 0.02
SPIDR-212ENST00000519661 CRKLP46109 303 aaKnown RBP15.19■□□□□ 0.02
SPIDR-212ENST00000519661 DCTN1Q14203 1278 aa15.19■□□□□ 0.02
SPIDR-212ENST00000519661 TTC5Q8N0Z6 440 aa15.19■□□□□ 0.02
SPIDR-212ENST00000519661 MRS2Q9HD23 443 aa15.19■□□□□ 0.02
SPIDR-212ENST00000519661 DNAJC10Q8IXB1 793 aa15.18■□□□□ 0.02
SPIDR-212ENST00000519661 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
SPIDR-212ENST00000519661 SOS1Q07889 1333 aaPredicted RBP15.17■□□□□ 0.02
SPIDR-212ENST00000519661 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
SPIDR-212ENST00000519661 CHL1O00533 1208 aa15.17■□□□□ 0.02
SPIDR-212ENST00000519661 RGL2O15211 777 aa15.17■□□□□ 0.02
SPIDR-212ENST00000519661 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
SPIDR-212ENST00000519661 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
SPIDR-212ENST00000519661 GNPATO15228 680 aa15.16■□□□□ 0.02
SPIDR-212ENST00000519661 KCNQ3O43525 872 aa15.16■□□□□ 0.02
SPIDR-212ENST00000519661 STARD3NLO95772 234 aa15.16■□□□□ 0.02
SPIDR-212ENST00000519661 SNRPA1P09661 255 aaKnown RBP15.16■□□□□ 0.02
SPIDR-212ENST00000519661 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
SPIDR-212ENST00000519661 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
SPIDR-212ENST00000519661 APAF1O14727 1248 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms