RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 TEFQ10587 303 aa27.56■■■□□ 2
TOP1MT-206ENST00000518951 NCBP3Q53F19 620 aaKnown RBP27.55■■■□□ 2
TOP1MT-206ENST00000518951 CCDC27Q2M243 656 aa27.54■■■□□ 2
TOP1MT-206ENST00000518951 WWC1Q8IX03 1113 aa27.54■■■□□ 2
TOP1MT-206ENST00000518951 APBA3O96018 575 aa27.53■■■□□ 2
TOP1MT-206ENST00000518951 ASAP1Q9ULH1 1129 aa27.53■■■□□ 2
TOP1MT-206ENST00000518951 PAPPAQ13219 1627 aa27.52■■■□□ 2
TOP1MT-206ENST00000518951 ATG3Q9NT62 314 aa27.51■■■□□ 2
TOP1MT-206ENST00000518951 SLC39A6Q13433 755 aa27.51■■□□□ 1.99
TOP1MT-206ENST00000518951 TAF7Q15545 349 aaPredicted RBP27.51■■□□□ 1.99
TOP1MT-206ENST00000518951 MIS18AQ9NYP9 233 aa27.51■■□□□ 1.99
TOP1MT-206ENST00000518951 CCDC125Q86Z20 511 aa27.5■■□□□ 1.99
TOP1MT-206ENST00000518951 LY75O60449 1722 aa27.49■■□□□ 1.99
TOP1MT-206ENST00000518951 KDM3BQ7LBC6 1761 aa27.48■■□□□ 1.99
TOP1MT-206ENST00000518951 BTBD11A6QL63 1104 aa27.48■■□□□ 1.99
TOP1MT-206ENST00000518951 DEFB132Q7Z7B7 95 aa27.48■■□□□ 1.99
TOP1MT-206ENST00000518951 NGEFQ8N5V2 710 aa27.48■■□□□ 1.99
TOP1MT-206ENST00000518951 KCNQ3O43525 872 aa27.47■■□□□ 1.99
TOP1MT-206ENST00000518951 SF3B2Q13435 895 aaKnown RBP27.47■■□□□ 1.99
TOP1MT-206ENST00000518951 ZNF521Q96K83 1311 aa27.47■■□□□ 1.99
TOP1MT-206ENST00000518951 UBR2Q8IWV8 1755 aa27.46■■□□□ 1.99
TOP1MT-206ENST00000518951 PLSCR1O15162 318 aa27.46■■□□□ 1.99
TOP1MT-206ENST00000518951 HNRNPUQ00839 825 aaKnown RBP eCLIP27.45■■□□□ 1.99
TOP1MT-206ENST00000518951 EN1Q05925 392 aaPredicted RBP27.45■■□□□ 1.99
TOP1MT-206ENST00000518951 PALLDQ8WX93 1383 aa27.45■■□□□ 1.99
TOP1MT-206ENST00000518951 RGPD3A6NKT7 1758 aaPredicted RBP27.44■■□□□ 1.98
TOP1MT-206ENST00000518951 RGPD4Q7Z3J3 1758 aa27.44■■□□□ 1.98
TOP1MT-206ENST00000518951 ZNF790Q6PG37 636 aa27.44■■□□□ 1.98
TOP1MT-206ENST00000518951 PROM2Q8N271 834 aa27.44■■□□□ 1.98
TOP1MT-206ENST00000518951 SMARCC1Q92922 1105 aaPredicted RBP27.44■■□□□ 1.98
TOP1MT-206ENST00000518951 LAS1LQ9Y4W2 734 aaKnown RBP27.44■■□□□ 1.98
TOP1MT-206ENST00000518951 KCPQ6ZWJ8 1503 aa27.43■■□□□ 1.98
TOP1MT-206ENST00000518951 ZNF853P0CG23 659 aa27.43■■□□□ 1.98
TOP1MT-206ENST00000518951 BAG6P46379 1132 aa27.43■■□□□ 1.98
TOP1MT-206ENST00000518951 CAMKK2Q96RR4 588 aa27.43■■□□□ 1.98
TOP1MT-206ENST00000518951 CHL1O00533 1208 aa27.42■■□□□ 1.98
TOP1MT-206ENST00000518951 EZH2Q15910 746 aaKnown RBP27.42■■□□□ 1.98
TOP1MT-206ENST00000518951 WDR63Q8IWG1 891 aa27.42■■□□□ 1.98
TOP1MT-206ENST00000518951 PTCD1O75127 700 aaKnown RBP27.41■■□□□ 1.98
TOP1MT-206ENST00000518951 CFAP44Q96MT7 982 aa27.41■■□□□ 1.98
TOP1MT-206ENST00000518951 SLC4A9Q96Q91 983 aa27.41■■□□□ 1.98
TOP1MT-206ENST00000518951 SPINK5Q9NQ38 1064 aaPredicted RBP27.41■■□□□ 1.98
TOP1MT-206ENST00000518951 KCNQ4P56696 695 aa27.4■■□□□ 1.98
TOP1MT-206ENST00000518951 CALD1Q05682 793 aaKnown RBP27.4■■□□□ 1.98
TOP1MT-206ENST00000518951 TSPYL4Q9UJ04 414 aa27.4■■□□□ 1.98
TOP1MT-206ENST00000518951 TXNRD1Q16881 649 aa27.39■■□□□ 1.98
TOP1MT-206ENST00000518951 RBM42Q9BTD8 480 aaKnown RBP27.39■■□□□ 1.98
TOP1MT-206ENST00000518951 IFT57Q9NWB7 429 aa27.39■■□□□ 1.98
TOP1MT-206ENST00000518951 RREB1Q92766 1687 aa27.39■■□□□ 1.97
TOP1MT-206ENST00000518951 TTC5Q8N0Z6 440 aa27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 ZNF496Q96IT1 587 aaPredicted RBP27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 BABAM1Q9NWV8 329 aa27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 IL16Q14005 1332 aa27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 LOC102724428A0A0B4J2F2 783 aa27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 SIK1P57059 783 aa27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 GNAI1P63096 354 aa27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 MBIPQ9NS73 344 aa27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 LRRC4BQ9NT99 713 aa27.38■■□□□ 1.97
TOP1MT-206ENST00000518951 TAF1LQ8IZX4 1826 aa27.36■■□□□ 1.97
TOP1MT-206ENST00000518951 ZNF831Q5JPB2 1677 aa27.36■■□□□ 1.97
TOP1MT-206ENST00000518951 SOCS7O14512 581 aa27.36■■□□□ 1.97
TOP1MT-206ENST00000518951 TJP1Q07157 1748 aa27.36■■□□□ 1.97
TOP1MT-206ENST00000518951 EIF4A1P60842 406 aaKnown RBP27.35■■□□□ 1.97
TOP1MT-206ENST00000518951 CCNL1Q9UK58 526 aaPredicted RBP27.35■■□□□ 1.97
TOP1MT-206ENST00000518951 TSR2Q969E8 191 aaKnown RBP27.34■■□□□ 1.97
TOP1MT-206ENST00000518951 ITPK1Q13572 414 aa27.33■■□□□ 1.97
TOP1MT-206ENST00000518951 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.97
TOP1MT-206ENST00000518951 CDCA7LQ96GN5 454 aa27.33■■□□□ 1.97
TOP1MT-206ENST00000518951 FMNL2Q96PY5 1086 aa27.33■■□□□ 1.97
TOP1MT-206ENST00000518951 HEG1Q9ULI3 1381 aa27.32■■□□□ 1.96
TOP1MT-206ENST00000518951 ATP6V1AP38606 617 aa27.32■■□□□ 1.96
TOP1MT-206ENST00000518951 GOLGA2Q08379 1002 aa27.32■■□□□ 1.96
TOP1MT-206ENST00000518951 C5P01031 1676 aa27.32■■□□□ 1.96
TOP1MT-206ENST00000518951 CICQ96RK0 1608 aaPredicted RBP27.32■■□□□ 1.96
TOP1MT-206ENST00000518951 KRT24Q2M2I5 525 aa27.32■■□□□ 1.96
TOP1MT-206ENST00000518951 SLC27A3Q5K4L6 730 aa27.32■■□□□ 1.96
TOP1MT-206ENST00000518951 COL5A3P25940 1745 aaPredicted RBP27.31■■□□□ 1.96
TOP1MT-206ENST00000518951 PRAMEF22A3QJZ6 481 aa27.31■■□□□ 1.96
TOP1MT-206ENST00000518951 ZBED9Q6R2W3 1325 aa27.3■■□□□ 1.96
TOP1MT-206ENST00000518951 DNAJC10Q8IXB1 793 aa27.3■■□□□ 1.96
TOP1MT-206ENST00000518951 FANCIQ9NVI1 1328 aa27.29■■□□□ 1.96
TOP1MT-206ENST00000518951 VSIG10Q8N0Z9 540 aa27.29■■□□□ 1.96
TOP1MT-206ENST00000518951 SLFN5Q08AF3 891 aa27.28■■□□□ 1.96
TOP1MT-206ENST00000518951 LINC00116Q8NCU8 138 aa27.28■■□□□ 1.96
TOP1MT-206ENST00000518951 YTHDC1Q96MU7 727 aaKnown RBP27.28■■□□□ 1.96
TOP1MT-206ENST00000518951 MYH14Q7Z406 1995 aaKnown RBP27.27■■□□□ 1.96
TOP1MT-206ENST00000518951 GIGYF1O75420 1035 aaPredicted RBP27.26■■□□□ 1.95
TOP1MT-206ENST00000518951 SNRPA1P09661 255 aaKnown RBP27.25■■□□□ 1.95
TOP1MT-206ENST00000518951 USP16Q9Y5T5 823 aa27.25■■□□□ 1.95
TOP1MT-206ENST00000518951 C4BP0C0L5 1744 aa27.25■■□□□ 1.95
TOP1MT-206ENST00000518951 E9PSI1 815 aa27.25■■□□□ 1.95
TOP1MT-206ENST00000518951 TRMT2AQ8IZ69 625 aaKnown RBP27.25■■□□□ 1.95
TOP1MT-206ENST00000518951 C8orf58Q8NAV2 365 aa27.25■■□□□ 1.95
TOP1MT-206ENST00000518951 LAMB4A4D0S4 1761 aa27.24■■□□□ 1.95
TOP1MT-206ENST00000518951 MYH16Q9H6N6 1097 aa27.24■■□□□ 1.95
TOP1MT-206ENST00000518951 CYP19A1P11511 503 aaPredicted RBP27.23■■□□□ 1.95
TOP1MT-206ENST00000518951 TSPYL6Q8N831 410 aa27.22■■□□□ 1.95
TOP1MT-206ENST00000518951 ELL2O00472 640 aaPredicted RBP27.21■■□□□ 1.95
TOP1MT-206ENST00000518951 EXOSC9Q06265 439 aaKnown RBP27.21■■□□□ 1.95
TOP1MT-206ENST00000518951 ANO8Q9HCE9 1232 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms