RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 STK32BQ9NY57 414 aa29.17■■■□□ 2.26
VEGFA-217ENST00000518538 MAPK8IP3Q9UPT6 1336 aa29.17■■■□□ 2.26
VEGFA-217ENST00000518538 IL17REQ8NFR9 667 aa29.16■■■□□ 2.26
VEGFA-217ENST00000518538 SLC15A2Q16348 729 aa29.15■■■□□ 2.26
VEGFA-217ENST00000518538 CEMIPQ8WUJ3 1361 aa29.14■■■□□ 2.26
VEGFA-217ENST00000518538 LOC102724428A0A0B4J2F2 783 aa29.14■■■□□ 2.26
VEGFA-217ENST00000518538 HMGB2P26583 209 aaKnown RBP29.14■■■□□ 2.26
VEGFA-217ENST00000518538 SIK1P57059 783 aa29.14■■■□□ 2.26
VEGFA-217ENST00000518538 HTATSF1O43719 755 aaKnown RBP29.13■■■□□ 2.25
VEGFA-217ENST00000518538 ADAMTS8Q9UP79 889 aa29.13■■■□□ 2.25
VEGFA-217ENST00000518538 RTF1Q92541 710 aaKnown RBP29.12■■■□□ 2.25
VEGFA-217ENST00000518538 TEFQ10587 303 aa29.11■■■□□ 2.25
VEGFA-217ENST00000518538 NFE2L2Q16236 605 aa29.11■■■□□ 2.25
VEGFA-217ENST00000518538 ZNF827Q17R98 1081 aa29.11■■■□□ 2.25
VEGFA-217ENST00000518538 CCDC184Q52MB2 194 aa29.11■■■□□ 2.25
VEGFA-217ENST00000518538 AKT1S1Q96B36 256 aa29.11■■■□□ 2.25
VEGFA-217ENST00000518538 C5P01031 1676 aa29.11■■■□□ 2.25
VEGFA-217ENST00000518538 ZNF831Q5JPB2 1677 aa29.09■■■□□ 2.25
VEGFA-217ENST00000518538 ATP6V1AP38606 617 aa29.08■■■□□ 2.25
VEGFA-217ENST00000518538 RBM42Q9BTD8 480 aaKnown RBP29.08■■■□□ 2.25
VEGFA-217ENST00000518538 TAF1LQ8IZX4 1826 aa29.08■■■□□ 2.25
VEGFA-217ENST00000518538 MCM10Q7L590 875 aa29.07■■■□□ 2.24
VEGFA-217ENST00000518538 CCDC146Q8IYE0 955 aa29.07■■■□□ 2.24
VEGFA-217ENST00000518538 RUNDC1Q96C34 613 aa29.07■■■□□ 2.24
VEGFA-217ENST00000518538 SIPA1L3O60292 1781 aaPredicted RBP29.06■■■□□ 2.24
VEGFA-217ENST00000518538 DLG5Q8TDM6 1919 aa29.06■■■□□ 2.24
VEGFA-217ENST00000518538 SLC39A6Q13433 755 aa29.05■■■□□ 2.24
VEGFA-217ENST00000518538 ITPK1Q13572 414 aa29.05■■■□□ 2.24
VEGFA-217ENST00000518538 SLC4A9Q96Q91 983 aa29.05■■■□□ 2.24
VEGFA-217ENST00000518538 MRS2Q9HD23 443 aa29.05■■■□□ 2.24
VEGFA-217ENST00000518538 C4BP0C0L5 1744 aa29.04■■■□□ 2.24
VEGFA-217ENST00000518538 PTCD1O75127 700 aaKnown RBP29.04■■■□□ 2.24
VEGFA-217ENST00000518538 DCTN1Q14203 1278 aa29.04■■■□□ 2.24
VEGFA-217ENST00000518538 CASZ1Q86V15 1759 aa29.03■■■□□ 2.24
VEGFA-217ENST00000518538 LINC00116Q8NCU8 138 aa29.03■■■□□ 2.24
VEGFA-217ENST00000518538 TFCP2L1Q9NZI6 479 aa29.03■■■□□ 2.24
VEGFA-217ENST00000518538 QSER1Q2KHR3 1735 aa29.03■■■□□ 2.24
VEGFA-217ENST00000518538 TMPOP42166 694 aaKnown RBP29.02■■■□□ 2.24
VEGFA-217ENST00000518538 KCPQ6ZWJ8 1503 aa29.02■■■□□ 2.24
VEGFA-217ENST00000518538 RIPK4P57078 832 aa29.01■■■□□ 2.23
VEGFA-217ENST00000518538 CICQ96RK0 1608 aaPredicted RBP29.01■■■□□ 2.23
VEGFA-217ENST00000518538 TTC5Q8N0Z6 440 aa29■■■□□ 2.23
VEGFA-217ENST00000518538 PNISRQ8TF01 805 aaKnown RBP29■■■□□ 2.23
VEGFA-217ENST00000518538 TUBGCP6Q96RT7 1819 aa28.99■■■□□ 2.23
VEGFA-217ENST00000518538 UBR2Q8IWV8 1755 aa28.99■■■□□ 2.23
VEGFA-217ENST00000518538 ZNF790Q6PG37 636 aa28.99■■■□□ 2.23
VEGFA-217ENST00000518538 AK7Q96M32 723 aa28.99■■■□□ 2.23
VEGFA-217ENST00000518538 PDGFDQ9GZP0 370 aaPredicted RBP28.99■■■□□ 2.23
VEGFA-217ENST00000518538 PNPLA7Q6ZV29 1317 aa28.98■■■□□ 2.23
VEGFA-217ENST00000518538 BTBD11A6QL63 1104 aa28.98■■■□□ 2.23
VEGFA-217ENST00000518538 LMOD3Q0VAK6 560 aa28.98■■■□□ 2.23
VEGFA-217ENST00000518538 COL5A3P25940 1745 aaPredicted RBP28.97■■■□□ 2.23
VEGFA-217ENST00000518538 TJP1Q07157 1748 aa28.97■■■□□ 2.23
VEGFA-217ENST00000518538 LRP5O75197 1615 aa28.96■■■□□ 2.23
VEGFA-217ENST00000518538 RRP7AQ9Y3A4 280 aaKnown RBP28.96■■■□□ 2.23
VEGFA-217ENST00000518538 TAF7Q15545 349 aaPredicted RBP28.95■■■□□ 2.22
VEGFA-217ENST00000518538 VSIG10Q8N0Z9 540 aa28.95■■■□□ 2.22
VEGFA-217ENST00000518538 THUMPD2Q9BTF0 503 aaKnown RBP28.95■■■□□ 2.22
VEGFA-217ENST00000518538 CNTNAP4Q9C0A0 1308 aa28.94■■■□□ 2.22
VEGFA-217ENST00000518538 NEUROD2Q15784 382 aa28.93■■■□□ 2.22
VEGFA-217ENST00000518538 RC3H1Q5TC82 1133 aaKnown RBP28.93■■■□□ 2.22
VEGFA-217ENST00000518538 FLAD1Q8NFF5 587 aa28.93■■■□□ 2.22
VEGFA-217ENST00000518538 ZNF496Q96IT1 587 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-217ENST00000518538 UBR3Q6ZT12 1888 aa28.91■■■□□ 2.22
VEGFA-217ENST00000518538 GNPATO15228 680 aa28.91■■■□□ 2.22
VEGFA-217ENST00000518538 KCNQ3O43525 872 aa28.91■■■□□ 2.22
VEGFA-217ENST00000518538 DNAJC10Q8IXB1 793 aa28.91■■■□□ 2.22
VEGFA-217ENST00000518538 FMNL2Q96PY5 1086 aa28.91■■■□□ 2.22
VEGFA-217ENST00000518538 SPON1Q9HCB6 807 aa28.91■■■□□ 2.22
VEGFA-217ENST00000518538 HEG1Q9ULI3 1381 aa28.9■■■□□ 2.22
VEGFA-217ENST00000518538 APAF1O14727 1248 aa28.9■■■□□ 2.22
VEGFA-217ENST00000518538 ZBTB7AO95365 584 aa28.9■■■□□ 2.22
VEGFA-217ENST00000518538 SSFA2P28290 1259 aa28.9■■■□□ 2.22
VEGFA-217ENST00000518538 COL23A1Q86Y22 540 aaPredicted RBP28.9■■■□□ 2.22
VEGFA-217ENST00000518538 SLC16A10Q8TF71 515 aa28.9■■■□□ 2.22
VEGFA-217ENST00000518538 MTFR1LQ9H019 292 aa28.9■■■□□ 2.22
VEGFA-217ENST00000518538 CRKLP46109 303 aaKnown RBP28.89■■■□□ 2.22
VEGFA-217ENST00000518538 AMIGO3Q86WK7 504 aa28.89■■■□□ 2.22
VEGFA-217ENST00000518538 TRIM35Q9UPQ4 493 aa28.89■■■□□ 2.22
VEGFA-217ENST00000518538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.87■■■□□ 2.21
VEGFA-217ENST00000518538 PHF14O94880 888 aa28.87■■■□□ 2.21
VEGFA-217ENST00000518538 RTCBQ9Y3I0 505 aaKnown RBP28.87■■■□□ 2.21
VEGFA-217ENST00000518538 MSH5O43196 834 aa28.86■■■□□ 2.21
VEGFA-217ENST00000518538 CYP19A1P11511 503 aaPredicted RBP28.86■■■□□ 2.21
VEGFA-217ENST00000518538 MIS18AQ9NYP9 233 aa28.86■■■□□ 2.21
VEGFA-217ENST00000518538 KDM3BQ7LBC6 1761 aa28.85■■■□□ 2.21
VEGFA-217ENST00000518538 RPS6KA4O75676 772 aa28.85■■■□□ 2.21
VEGFA-217ENST00000518538 TEX13AQ9BXU3 409 aaPredicted RBP28.85■■■□□ 2.21
VEGFA-217ENST00000518538 MYH14Q7Z406 1995 aaKnown RBP28.84■■■□□ 2.21
VEGFA-217ENST00000518538 INTS5Q6P9B9 1019 aaKnown RBP28.84■■■□□ 2.21
VEGFA-217ENST00000518538 SMIM5Q71RC9 77 aa28.84■■■□□ 2.21
VEGFA-217ENST00000518538 CCDC87Q9NVE4 849 aa28.84■■■□□ 2.21
VEGFA-217ENST00000518538 ATF5Q9Y2D1 282 aaPredicted RBP28.84■■■□□ 2.21
VEGFA-217ENST00000518538 STARD3NLO95772 234 aa28.83■■■□□ 2.21
VEGFA-217ENST00000518538 ADRA2BP18089 450 aa28.83■■■□□ 2.21
VEGFA-217ENST00000518538 DIEXFQ68CQ4 756 aaKnown RBP28.83■■■□□ 2.21
VEGFA-217ENST00000518538 BABAM1Q9NWV8 329 aa28.82■■■□□ 2.2
VEGFA-217ENST00000518538 SNRPA1P09661 255 aaKnown RBP28.8■■■□□ 2.2
VEGFA-217ENST00000518538 PTGER2P43116 358 aa28.8■■■□□ 2.2
VEGFA-217ENST00000518538 TRAPPC3LQ5T215 181 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms