RNA–Protein interactions for RNA: ENST00000518517.5

TPD52-208, Transcript of tumor protein D52, human

TSL 4

Gene TPD52, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPD52-208	ENST00000518517	SBF1	O95248	1867 aa		13.59	□□□□□ -0.23
TPD52-208	ENST00000518517		A0A0G2JLW4	131 aa		13.58	□□□□□ -0.24
TPD52-208	ENST00000518517	MMP10	P09238	476 aa		13.58	□□□□□ -0.24
TPD52-208	ENST00000518517	C9orf131	Q5VYM1	1079 aa		13.58	□□□□□ -0.24
TPD52-208	ENST00000518517	AMIGO3	Q86WK7	504 aa		13.58	□□□□□ -0.24
TPD52-208	ENST00000518517	L3MBTL2	Q969R5	705 aa		13.58	□□□□□ -0.24
TPD52-208	ENST00000518517	NBPF6	Q5VWK0	638 aa		13.57	□□□□□ -0.24
TPD52-208	ENST00000518517	USHBP1	Q8N6Y0	703 aa		13.57	□□□□□ -0.24
TPD52-208	ENST00000518517	SMC1B	Q8NDV3	1235 aa		13.57	□□□□□ -0.24
TPD52-208	ENST00000518517	NBPF4	Q96M43	638 aa		13.57	□□□□□ -0.24
TPD52-208	ENST00000518517	KCP	Q6ZWJ8	1503 aa		13.57	□□□□□ -0.24
TPD52-208	ENST00000518517		A0A1W2PP64	1363 aa		13.57	□□□□□ -0.24
TPD52-208	ENST00000518517	GNPAT	O15228	680 aa		13.56	□□□□□ -0.24
TPD52-208	ENST00000518517	HSPA1A	P0DMV8	641 aa	Known RBP	13.56	□□□□□ -0.24
TPD52-208	ENST00000518517	HSPA1B	P0DMV9	641 aa	Known RBP	13.56	□□□□□ -0.24
TPD52-208	ENST00000518517	RRAGC	Q9HB90	399 aa		13.56	□□□□□ -0.24
TPD52-208	ENST00000518517	CCDC87	Q9NVE4	849 aa		13.56	□□□□□ -0.24
TPD52-208	ENST00000518517	RTL1	A6NKG5	1358 aa		13.56	□□□□□ -0.24
TPD52-208	ENST00000518517	C4A	P0C0L4	1744 aa		13.56	□□□□□ -0.24
TPD52-208	ENST00000518517	NLGN1	Q8N2Q7	840 aa		13.55	□□□□□ -0.24
TPD52-208	ENST00000518517	PCDH10	Q9P2E7	1040 aa		13.55	□□□□□ -0.24
TPD52-208	ENST00000518517	C10orf71	Q711Q0	1435 aa		13.55	□□□□□ -0.24
TPD52-208	ENST00000518517	CCDC88A	Q3V6T2	1871 aa		13.55	□□□□□ -0.24
TPD52-208	ENST00000518517	LOC102724428	A0A0B4J2F2	783 aa		13.54	□□□□□ -0.24
TPD52-208	ENST00000518517	DPEP1	P16444	411 aa		13.54	□□□□□ -0.24
TPD52-208	ENST00000518517	SIK1	P57059	783 aa		13.54	□□□□□ -0.24
TPD52-208	ENST00000518517	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.54	□□□□□ -0.24
TPD52-208	ENST00000518517	LINC00116	Q8NCU8	138 aa		13.54	□□□□□ -0.24
TPD52-208	ENST00000518517	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.54	□□□□□ -0.24
TPD52-208	ENST00000518517	FBLN1	P23142	703 aa		13.53	□□□□□ -0.24
TPD52-208	ENST00000518517	TMF1	P82094	1093 aa		13.53	□□□□□ -0.24
TPD52-208	ENST00000518517	PIGB	Q92521	554 aa		13.53	□□□□□ -0.24
TPD52-208	ENST00000518517	RNF181	Q9P0P0	153 aa		13.53	□□□□□ -0.24
TPD52-208	ENST00000518517	PCNT	O95613	3336 aa		13.53	□□□□□ -0.24
TPD52-208	ENST00000518517	ATP6V1A	P38606	617 aa		13.52	□□□□□ -0.25
TPD52-208	ENST00000518517	TRAPPC3L	Q5T215	181 aa		13.52	□□□□□ -0.25
TPD52-208	ENST00000518517	PIM2	Q9P1W9	311 aa		13.52	□□□□□ -0.25
TPD52-208	ENST00000518517	PARP3	Q9Y6F1	533 aa		13.52	□□□□□ -0.25
TPD52-208	ENST00000518517	CYP27B1	O15528	508 aa		13.51	□□□□□ -0.25
TPD52-208	ENST00000518517	RRS1	Q15050	365 aa	Known RBP	13.51	□□□□□ -0.25
TPD52-208	ENST00000518517	RTCB	Q9Y3I0	505 aa	Known RBP	13.51	□□□□□ -0.25
TPD52-208	ENST00000518517	DALRD3	Q5D0E6	543 aa	Known RBP	13.5	□□□□□ -0.25
TPD52-208	ENST00000518517	TMOD3	Q9NYL9	352 aa		13.5	□□□□□ -0.25
TPD52-208	ENST00000518517	KIF20B	Q96Q89	1820 aa		13.49	□□□□□ -0.25
TPD52-208	ENST00000518517	MYCN	P04198	464 aa	Predicted RBP	13.49	□□□□□ -0.25
TPD52-208	ENST00000518517	ITPK1	Q13572	414 aa		13.49	□□□□□ -0.25
TPD52-208	ENST00000518517	PUS7	Q96PZ0	661 aa	Known RBP	13.49	□□□□□ -0.25
TPD52-208	ENST00000518517	CARD11	Q9BXL7	1154 aa		13.49	□□□□□ -0.25
TPD52-208	ENST00000518517	COL5A3	P25940	1745 aa	Predicted RBP	13.48	□□□□□ -0.25
TPD52-208	ENST00000518517	ZNF831	Q5JPB2	1677 aa		13.48	□□□□□ -0.25
TPD52-208	ENST00000518517	RFC4	P35249	363 aa		13.48	□□□□□ -0.25
TPD52-208	ENST00000518517	DCAF5	Q96JK2	942 aa		13.48	□□□□□ -0.25
TPD52-208	ENST00000518517	SPG7	Q9UQ90	795 aa		13.48	□□□□□ -0.25
TPD52-208	ENST00000518517	INSR	P06213	1382 aa		13.47	□□□□□ -0.25
TPD52-208	ENST00000518517	VEGFA	P15692	232 aa	Predicted RBP	13.47	□□□□□ -0.25
TPD52-208	ENST00000518517	NKX1-1	Q15270	411 aa	Predicted RBP	13.47	□□□□□ -0.25
TPD52-208	ENST00000518517	ASAP1	Q9ULH1	1129 aa		13.47	□□□□□ -0.25
TPD52-208	ENST00000518517	TIAM2	Q8IVF5	1701 aa		13.47	□□□□□ -0.25
TPD52-208	ENST00000518517	KCNA3	P22001	575 aa		13.46	□□□□□ -0.25
TPD52-208	ENST00000518517	HSP90AB2P	Q58FF8	381 aa		13.46	□□□□□ -0.25
TPD52-208	ENST00000518517	ARHGEF1	Q92888	912 aa	Known RBP	13.46	□□□□□ -0.25
TPD52-208	ENST00000518517	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.45	□□□□□ -0.26
TPD52-208	ENST00000518517	GYS1	P13807	737 aa		13.45	□□□□□ -0.26
TPD52-208	ENST00000518517	NEUROD1	Q13562	356 aa		13.45	□□□□□ -0.26
TPD52-208	ENST00000518517	FLT4	P35916	1363 aa		13.45	□□□□□ -0.26
TPD52-208	ENST00000518517	MYH14	Q7Z406	1995 aa	Known RBP	13.44	□□□□□ -0.26
TPD52-208	ENST00000518517	RC3H1	Q5TC82	1133 aa	Known RBP	13.44	□□□□□ -0.26
TPD52-208	ENST00000518517	KIF24	Q5T7B8	1368 aa		13.44	□□□□□ -0.26
TPD52-208	ENST00000518517	GLTPD2	A6NH11	291 aa		13.43	□□□□□ -0.26
TPD52-208	ENST00000518517	IFNL2	Q8IZJ0	200 aa		13.43	□□□□□ -0.26
TPD52-208	ENST00000518517	SIN3A	Q96ST3	1273 aa		13.43	□□□□□ -0.26
TPD52-208	ENST00000518517	RBM42	Q9BTD8	480 aa	Known RBP	13.43	□□□□□ -0.26
TPD52-208	ENST00000518517	GGNBP2	Q9H3C7	697 aa		13.43	□□□□□ -0.26
TPD52-208	ENST00000518517	ATG3	Q9NT62	314 aa		13.43	□□□□□ -0.26
TPD52-208	ENST00000518517	RPS6KA4	O75676	772 aa		13.42	□□□□□ -0.26
TPD52-208	ENST00000518517	DICER1	Q9UPY3	1922 aa	Known RBP	13.42	□□□□□ -0.26
TPD52-208	ENST00000518517	DLEC1	Q9Y238	1755 aa		13.41	□□□□□ -0.26
TPD52-208	ENST00000518517	FYB1	O15117	783 aa		13.41	□□□□□ -0.26
TPD52-208	ENST00000518517	LMNB1	P20700	586 aa		13.41	□□□□□ -0.26
TPD52-208	ENST00000518517	CNTNAP4	Q9C0A0	1308 aa		13.4	□□□□□ -0.26
TPD52-208	ENST00000518517	SLC24A1	O60721	1099 aa		13.4	□□□□□ -0.26
TPD52-208	ENST00000518517	PHKG2	P15735	406 aa		13.4	□□□□□ -0.26
TPD52-208	ENST00000518517	CHRNA5	P30532	468 aa		13.4	□□□□□ -0.26
TPD52-208	ENST00000518517	AIDA	Q96BJ3	306 aa		13.4	□□□□□ -0.26
TPD52-208	ENST00000518517	PRDM10	Q9NQV6	1147 aa		13.4	□□□□□ -0.26
TPD52-208	ENST00000518517	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.4	□□□□□ -0.26	2e-6	■□□□□ 10.8
TPD52-208	ENST00000518517	MKRN1	Q9UHC7	482 aa	Known RBP	13.4	□□□□□ -0.26
TPD52-208	ENST00000518517	AFDN	P55196	1824 aa	Known RBP	13.4	□□□□□ -0.26
TPD52-208	ENST00000518517	RASSF7	Q02833	373 aa		13.39	□□□□□ -0.27
TPD52-208	ENST00000518517	DPY19L2	Q6NUT2	758 aa		13.39	□□□□□ -0.27
TPD52-208	ENST00000518517	FOXD4L1	Q9NU39	408 aa		13.39	□□□□□ -0.27
TPD52-208	ENST00000518517	KDR	P35968	1356 aa		13.39	□□□□□ -0.27
TPD52-208	ENST00000518517	CREBZF	Q9NS37	354 aa		13.38	□□□□□ -0.27
TPD52-208	ENST00000518517	KDM6A	O15550	1401 aa	Predicted RBP	13.38	□□□□□ -0.27
TPD52-208	ENST00000518517	FOXN1	O15353	648 aa		13.37	□□□□□ -0.27
TPD52-208	ENST00000518517	PPM1G	O15355	546 aa	Predicted RBP	13.37	□□□□□ -0.27
TPD52-208	ENST00000518517	CTCF	P49711	727 aa	Predicted RBP	13.37	□□□□□ -0.27
TPD52-208	ENST00000518517	FKBP8	Q14318	412 aa		13.37	□□□□□ -0.27
TPD52-208	ENST00000518517	NCAPD2	Q15021	1401 aa		13.37	□□□□□ -0.27
TPD52-208	ENST00000518517	VIRMA	Q69YN4	1812 aa	Known RBP	13.36	□□□□□ -0.27

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