RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 NBPF6Q5VWK0 638 aa13.95□□□□□ -0.18
SH2D4A-202ENST00000518040 NBPF4Q96M43 638 aa13.95□□□□□ -0.18
SH2D4A-202ENST00000518040 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
SH2D4A-202ENST00000518040 C10orf71Q711Q0 1435 aa13.94□□□□□ -0.18
SH2D4A-202ENST00000518040 RGPD2P0DJD1 1756 aa13.94□□□□□ -0.18
SH2D4A-202ENST00000518040 MMP10P09238 476 aa13.93□□□□□ -0.18
SH2D4A-202ENST00000518040 AMIGO3Q86WK7 504 aa13.93□□□□□ -0.18
SH2D4A-202ENST00000518040 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
SH2D4A-202ENST00000518040 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 FCHSD2O94868 740 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 SIK1P57059 783 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 SMC1BQ8NDV3 1235 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 CCDC87Q9NVE4 849 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 A0A0G2JLW4 131 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 GNPATO15228 680 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 HTRA3P83110 453 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 C9orf131Q5VYM1 1079 aa13.91□□□□□ -0.18
SH2D4A-202ENST00000518040 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
SH2D4A-202ENST00000518040 LINC00116Q8NCU8 138 aa13.9□□□□□ -0.18
SH2D4A-202ENST00000518040 PIGBQ92521 554 aa13.9□□□□□ -0.18
SH2D4A-202ENST00000518040 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
SH2D4A-202ENST00000518040 ITGB4P16144 1822 aa13.9□□□□□ -0.18
SH2D4A-202ENST00000518040 CYP27B1O15528 508 aa13.89□□□□□ -0.19
SH2D4A-202ENST00000518040 TMF1P82094 1093 aa13.89□□□□□ -0.19
SH2D4A-202ENST00000518040 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
SH2D4A-202ENST00000518040 N4BP2Q86UW6 1770 aaPredicted RBP13.89□□□□□ -0.19
SH2D4A-202ENST00000518040 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 TRAPPC3LQ5T215 181 aa13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 KIF24Q5T7B8 1368 aa13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 MAP2P11137 1827 aaKnown RBP13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 INSRP06213 1382 aa13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 DPEP1P16444 411 aa13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 SMIM5Q71RC9 77 aa13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
SH2D4A-202ENST00000518040 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 HSPA1AP0DMV8 641 aaKnown RBP13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 HSPA1BP0DMV9 641 aaKnown RBP13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 CHRDL2Q6WN34 429 aa13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 RRAGCQ9HB90 399 aa13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 TMOD3Q9NYL9 352 aa13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 PIM2Q9P1W9 311 aa13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 SPG7Q9UQ90 795 aa13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 PARP3Q9Y6F1 533 aa13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
SH2D4A-202ENST00000518040 ARFGEF1Q9Y6D6 1849 aa13.86□□□□□ -0.19
SH2D4A-202ENST00000518040 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
SH2D4A-202ENST00000518040 FBLN1P23142 703 aa13.86□□□□□ -0.19
SH2D4A-202ENST00000518040 RRS1Q15050 365 aaKnown RBP13.86□□□□□ -0.19
SH2D4A-202ENST00000518040 BRCA1P38398 1863 aaKnown RBP13.86□□□□□ -0.19
SH2D4A-202ENST00000518040 FLT4P35916 1363 aa13.86□□□□□ -0.19
SH2D4A-202ENST00000518040 DCAF5Q96JK2 942 aa13.85□□□□□ -0.19
SH2D4A-202ENST00000518040 RNF181Q9P0P0 153 aa13.85□□□□□ -0.19
SH2D4A-202ENST00000518040 PCNTO95613 3336 aa13.85□□□□□ -0.19
SH2D4A-202ENST00000518040 ITPK1Q13572 414 aa13.85□□□□□ -0.19
SH2D4A-202ENST00000518040 DALRD3Q5D0E6 543 aaKnown RBP13.85□□□□□ -0.19
SH2D4A-202ENST00000518040 C4AP0C0L4 1744 aa13.84□□□□□ -0.19
SH2D4A-202ENST00000518040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.197e-7■■■■■ 30.9
SH2D4A-202ENST00000518040 SLC34A2O95436 690 aa13.83□□□□□ -0.2
SH2D4A-202ENST00000518040 KCNA3P22001 575 aa13.83□□□□□ -0.2
SH2D4A-202ENST00000518040 RFC4P35249 363 aa13.83□□□□□ -0.2
SH2D4A-202ENST00000518040 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
SH2D4A-202ENST00000518040 RC3H1Q5TC82 1133 aaKnown RBP13.83□□□□□ -0.2
SH2D4A-202ENST00000518040 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
SH2D4A-202ENST00000518040 GYS1P13807 737 aa13.82□□□□□ -0.2
SH2D4A-202ENST00000518040 VEGFAP15692 232 aaPredicted RBP13.82□□□□□ -0.2
SH2D4A-202ENST00000518040 FYB1O15117 783 aa13.81□□□□□ -0.2
SH2D4A-202ENST00000518040 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
SH2D4A-202ENST00000518040 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
SH2D4A-202ENST00000518040 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
SH2D4A-202ENST00000518040 SIN3AQ96ST3 1273 aa13.8□□□□□ -0.2
SH2D4A-202ENST00000518040 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
SH2D4A-202ENST00000518040 CNTNAP4Q9C0A0 1308 aa13.8□□□□□ -0.2
SH2D4A-202ENST00000518040 NCAPD2Q15021 1401 aa13.8□□□□□ -0.2
SH2D4A-202ENST00000518040 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
SH2D4A-202ENST00000518040 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
SH2D4A-202ENST00000518040 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
SH2D4A-202ENST00000518040 GLTPD2A6NH11 291 aa13.79□□□□□ -0.2
SH2D4A-202ENST00000518040 KDRP35968 1356 aa13.78□□□□□ -0.2
SH2D4A-202ENST00000518040 TONSLQ96HA7 1378 aa13.78□□□□□ -0.2
SH2D4A-202ENST00000518040 SBF1O95248 1867 aa13.77□□□□□ -0.2
SH2D4A-202ENST00000518040 PHKG2P15735 406 aa13.77□□□□□ -0.21
SH2D4A-202ENST00000518040 KDM6AO15550 1401 aaPredicted RBP13.76□□□□□ -0.21
SH2D4A-202ENST00000518040 LMNB1P20700 586 aa13.76□□□□□ -0.21
SH2D4A-202ENST00000518040 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
SH2D4A-202ENST00000518040 ERVV-2B6SEH9 535 aa13.75□□□□□ -0.21
SH2D4A-202ENST00000518040 TESK2Q96S53 571 aa13.75□□□□□ -0.21
SH2D4A-202ENST00000518040 PRDM10Q9NQV6 1147 aa13.75□□□□□ -0.21
SH2D4A-202ENST00000518040 PCDH10Q9P2E7 1040 aa13.75□□□□□ -0.21
SH2D4A-202ENST00000518040 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
SH2D4A-202ENST00000518040 COL5A3P25940 1745 aaPredicted RBP13.74□□□□□ -0.21
SH2D4A-202ENST00000518040 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
SH2D4A-202ENST00000518040 DPY19L2Q6NUT2 758 aa13.73□□□□□ -0.21
SH2D4A-202ENST00000518040 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
SH2D4A-202ENST00000518040 CHRNA5P30532 468 aa13.72□□□□□ -0.21
SH2D4A-202ENST00000518040 SLC4A9Q96Q91 983 aa13.72□□□□□ -0.21
SH2D4A-202ENST00000518040 KIF20BQ96Q89 1820 aa13.72□□□□□ -0.21
SH2D4A-202ENST00000518040 WASHC2AQ641Q2 1341 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms