RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 TOM1O60784 492 aa16.38■□□□□ 0.21
PVT1-203ENST00000513868 IGHDP01880 384 aa16.38■□□□□ 0.21
PVT1-203ENST00000513868 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
PVT1-203ENST00000513868 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
PVT1-203ENST00000513868 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
PVT1-203ENST00000513868 ITPRIPQ8IWB1 547 aa16.37■□□□□ 0.21
PVT1-203ENST00000513868 MRC1P22897 1456 aa16.37■□□□□ 0.21
PVT1-203ENST00000513868 WNK3Q9BYP7 1800 aa16.37■□□□□ 0.21
PVT1-203ENST00000513868 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
PVT1-203ENST00000513868 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
PVT1-203ENST00000513868 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
PVT1-203ENST00000513868 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
PVT1-203ENST00000513868 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
PVT1-203ENST00000513868 API5Q9BZZ5 524 aaKnown RBP16.36■□□□□ 0.21
PVT1-203ENST00000513868 BTG4Q9NY30 223 aa16.36■□□□□ 0.21
PVT1-203ENST00000513868 NRAPQ86VF7 1730 aa16.36■□□□□ 0.21
PVT1-203ENST00000513868 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
PVT1-203ENST00000513868 EVA1CP58658 441 aa16.35■□□□□ 0.21
PVT1-203ENST00000513868 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
PVT1-203ENST00000513868 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
PVT1-203ENST00000513868 G2E3Q7L622 706 aa16.34■□□□□ 0.21
PVT1-203ENST00000513868 PTPRCP08575 1304 aa16.34■□□□□ 0.21
PVT1-203ENST00000513868 C5P01031 1676 aa16.34■□□□□ 0.21
PVT1-203ENST00000513868 ZBTB7BO15156 539 aaPredicted RBP16.34■□□□□ 0.21
PVT1-203ENST00000513868 CCDC30Q5VVM6 783 aa16.34■□□□□ 0.21
PVT1-203ENST00000513868 HOXB7P09629 217 aa16.33■□□□□ 0.2
PVT1-203ENST00000513868 IL2RBP14784 551 aa16.33■□□□□ 0.2
PVT1-203ENST00000513868 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
PVT1-203ENST00000513868 SLC52A2Q9HAB3 445 aa16.33■□□□□ 0.2
PVT1-203ENST00000513868 INTS3Q68E01 1043 aaKnown RBP16.32■□□□□ 0.2
PVT1-203ENST00000513868 SKAP1Q86WV1 359 aa16.32■□□□□ 0.2
PVT1-203ENST00000513868 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
PVT1-203ENST00000513868 TOGARAM1Q9Y4F4 1720 aa16.32■□□□□ 0.2
PVT1-203ENST00000513868 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
PVT1-203ENST00000513868 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
PVT1-203ENST00000513868 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
PVT1-203ENST00000513868 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
PVT1-203ENST00000513868 NECTIN2Q92692 538 aa16.3■□□□□ 0.2
PVT1-203ENST00000513868 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
PVT1-203ENST00000513868 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
PVT1-203ENST00000513868 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
PVT1-203ENST00000513868 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
PVT1-203ENST00000513868 DISP2A7MBM2 1401 aa16.3■□□□□ 0.2
PVT1-203ENST00000513868 PAPPAQ13219 1627 aa16.29■□□□□ 0.2
PVT1-203ENST00000513868 GLI3P10071 1580 aa16.29■□□□□ 0.2
PVT1-203ENST00000513868 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
PVT1-203ENST00000513868 NKX1-1Q15270 411 aaPredicted RBP16.29■□□□□ 0.2
PVT1-203ENST00000513868 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
PVT1-203ENST00000513868 ITGB4P16144 1822 aa16.29■□□□□ 0.2
PVT1-203ENST00000513868 ZNF790Q6PG37 636 aa16.28■□□□□ 0.2
PVT1-203ENST00000513868 FLIIQ13045 1269 aa16.27■□□□□ 0.2
PVT1-203ENST00000513868 SLC39A6Q13433 755 aa16.27■□□□□ 0.2
PVT1-203ENST00000513868 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.2
PVT1-203ENST00000513868 USP35Q9P2H5 1018 aa16.27■□□□□ 0.2
PVT1-203ENST00000513868 PRAMEF22A3QJZ6 481 aa16.27■□□□□ 0.19
PVT1-203ENST00000513868 ADAMTS2O95450 1211 aa16.27■□□□□ 0.19
PVT1-203ENST00000513868 EIF2S2P20042 333 aaKnown RBP16.27■□□□□ 0.19
PVT1-203ENST00000513868 RWDD1Q9H446 243 aaPredicted RBP16.27■□□□□ 0.19
PVT1-203ENST00000513868 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
PVT1-203ENST00000513868 F6X3S4 739 aa16.26■□□□□ 0.19
PVT1-203ENST00000513868 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
PVT1-203ENST00000513868 PHAXQ9H814 394 aaKnown RBP16.25■□□□□ 0.19
PVT1-203ENST00000513868 CHPF2Q9P2E5 772 aa16.25■□□□□ 0.19
PVT1-203ENST00000513868 CABP4P57796 275 aa16.24■□□□□ 0.19
PVT1-203ENST00000513868 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
PVT1-203ENST00000513868 SLIT2O94813 1529 aa16.24■□□□□ 0.19
PVT1-203ENST00000513868 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
PVT1-203ENST00000513868 CERKQ8TCT0 537 aa16.24■□□□□ 0.19
PVT1-203ENST00000513868 DDX54Q8TDD1 881 aaKnown RBP16.24■□□□□ 0.19
PVT1-203ENST00000513868 PXDNLA1KZ92 1463 aa16.23■□□□□ 0.19
PVT1-203ENST00000513868 NUTM2BA6NNL0 878 aaPredicted RBP16.23■□□□□ 0.19
PVT1-203ENST00000513868 NUTM2EB1AL46 878 aaPredicted RBP16.23■□□□□ 0.19
PVT1-203ENST00000513868 FKBP5Q13451 457 aaPredicted RBP16.23■□□□□ 0.19
PVT1-203ENST00000513868 NUTM2AQ8IVF1 878 aaPredicted RBP16.23■□□□□ 0.19
PVT1-203ENST00000513868 ZNF496Q96IT1 587 aaPredicted RBP16.23■□□□□ 0.19
PVT1-203ENST00000513868 C1orf115Q9H7X2 142 aa16.23■□□□□ 0.19
PVT1-203ENST00000513868 CCT4P50991 539 aaKnown RBP16.22■□□□□ 0.19
PVT1-203ENST00000513868 SIRT2Q8IXJ6 389 aa16.22■□□□□ 0.19
PVT1-203ENST00000513868 RBM19Q9Y4C8 960 aaKnown RBP16.22■□□□□ 0.19
PVT1-203ENST00000513868 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
PVT1-203ENST00000513868 ANXA1P04083 346 aa16.21■□□□□ 0.19
PVT1-203ENST00000513868 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
PVT1-203ENST00000513868 DBF4Q9UBU7 674 aaPredicted RBP16.21■□□□□ 0.19
PVT1-203ENST00000513868 SPATA31A1Q5TZJ5 1347 aa16.21■□□□□ 0.19
PVT1-203ENST00000513868 KCPQ6ZWJ8 1503 aa16.21■□□□□ 0.19
PVT1-203ENST00000513868 JCADQ9P266 1359 aa16.21■□□□□ 0.18
PVT1-203ENST00000513868 PDIA6Q15084 440 aa16.21■□□□□ 0.18
PVT1-203ENST00000513868 PROSER3Q2NL68 480 aa16.21■□□□□ 0.18
PVT1-203ENST00000513868 SLC4A10Q6U841 1118 aa16.21■□□□□ 0.18
PVT1-203ENST00000513868 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.18
PVT1-203ENST00000513868 LRP6O75581 1613 aa16.2■□□□□ 0.18
PVT1-203ENST00000513868 ATP10DQ9P241 1426 aa16.2■□□□□ 0.18
PVT1-203ENST00000513868 MEIS3Q99687 375 aa16.2■□□□□ 0.18
PVT1-203ENST00000513868 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
PVT1-203ENST00000513868 TNS2Q63HR2 1409 aa16.19■□□□□ 0.18
PVT1-203ENST00000513868 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
PVT1-203ENST00000513868 SPATA31A5Q5VU36 1347 aa16.18■□□□□ 0.18
PVT1-203ENST00000513868 SPATA31A7Q8IWB4 1347 aa16.18■□□□□ 0.18
PVT1-203ENST00000513868 ADCY9O60503 1353 aa16.18■□□□□ 0.18
PVT1-203ENST00000513868 SNRPA1P09661 255 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms