RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 HMG20BQ9P0W2 317 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 R3HCC1Q9Y3T6 440 aaKnown RBP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 E9PCH4 1651 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 NPHP3Q7Z494 1330 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 TRIM6-TRIM34B2RNG4 842 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 SH2B1Q9NRF2 756 aaPredicted RBP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 MYO3AQ8NEV4 1616 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 ERLIN2O94905 339 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 TPD52L1Q16890 204 aaPredicted RBP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 ABCD1P33897 745 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 CEP128Q6ZU80 1094 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 DLG5Q8TDM6 1919 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 PPP1R12BO60237 982 aaPredicted RBP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 FRAT2O75474 233 aaPredicted RBP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 CNGB1Q14028 1251 aaPredicted RBP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 NOM1Q5C9Z4 860 aaKnown RBP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 OLFM4Q6UX06 510 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 TMTC2Q8N394 836 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 AK7Q96M32 723 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 C22orf23Q9BZE7 217 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 LMO7Q8WWI1 1683 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 CDC45O75419 566 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 UBTFL1P0CB47 393 aaPredicted RBP5.86□□□□□ -1.47
PTPN13-209ENST00000511467 KANK3Q6NY19 840 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 FAM135BQ49AJ0 1406 aa5.86□□□□□ -1.47
PTPN13-209ENST00000511467 GOLGA6L9A6NEM1 432 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 CBFA2T2O43439 604 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 TNIP1Q15025 636 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 APBB1IPQ7Z5R6 666 aaPredicted RBP5.85□□□□□ -1.47
PTPN13-209ENST00000511467 PLCD3Q8N3E9 789 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 CDC5LQ99459 802 aaKnown RBP5.85□□□□□ -1.47
PTPN13-209ENST00000511467 MED14O60244 1454 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 CALRP27797 417 aaKnown RBP5.85□□□□□ -1.47
PTPN13-209ENST00000511467 PPP2R5BQ15173 497 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 USP37Q86T82 979 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 NEXMIFQ5QGS0 1516 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 ZFYP08048 801 aaPredicted RBP5.85□□□□□ -1.47
PTPN13-209ENST00000511467 FILIP1LQ4L180 1135 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 LARP1Q6PKG0 1096 aaKnown RBP5.85□□□□□ -1.47
PTPN13-209ENST00000511467 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.85□□□□□ -1.47
PTPN13-209ENST00000511467 COL17A1Q9UMD9 1497 aaPredicted RBP5.85□□□□□ -1.47
PTPN13-209ENST00000511467 DLC1Q96QB1 1528 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 NEMFO60524 1076 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 CLUL1Q15846 466 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 CCDC73Q6ZRK6 1079 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 CCDC158Q5M9N0 1113 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 IQCDQ96DY2 449 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 TAF3Q5VWG9 929 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 TXNDC2Q86VQ3 553 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 NCAPD2Q15021 1401 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 ANKARQ7Z5J8 1434 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 RICTORQ6R327 1708 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 BECN2A8MW95 431 aa5.85□□□□□ -1.47
PTPN13-209ENST00000511467 MEX3CQ5U5Q3 659 aaKnown RBP5.85□□□□□ -1.47
PTPN13-209ENST00000511467 ADGRB3O60242 1522 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 NUMA1Q14980 2115 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 MYO1BO43795 1136 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 PLCG2P16885 1265 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 STXBP4Q6ZWJ1 553 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 POLR3AO14802 1390 aaPredicted RBP5.84□□□□□ -1.47
PTPN13-209ENST00000511467 POTEJP0CG39 1038 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 CETN2P41208 172 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 RASSF8Q8NHQ8 419 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 CLUAP1Q96AJ1 413 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 CWC15Q9P013 229 aaKnown RBP5.84□□□□□ -1.47
PTPN13-209ENST00000511467 MARCH6O60337 910 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 NOL7Q9UMY1 257 aaKnown RBP5.84□□□□□ -1.47
PTPN13-209ENST00000511467 WDR33Q9C0J8 1336 aaKnown RBP5.84□□□□□ -1.47
PTPN13-209ENST00000511467 CCDC172P0C7W6 258 aa5.84□□□□□ -1.47
PTPN13-209ENST00000511467 BMP2KQ9NSY1 1161 aaPredicted RBP5.84□□□□□ -1.47
PTPN13-209ENST00000511467 GSTO1P78417 241 aa5.84□□□□□ -1.48
PTPN13-209ENST00000511467 HAUS2Q9NVX0 235 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 MYH4Q9Y623 1939 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 ANAPC15P60006 121 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 NAP1L4Q99733 375 aaKnown RBP5.83□□□□□ -1.48
PTPN13-209ENST00000511467 AOX1Q06278 1338 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 A6NNZ2 444 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 CCDC57Q2TAC2 916 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 TUBB8Q3ZCM7 444 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 NYXQ9GZU5 481 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 STK26Q9P289 416 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 ANKRD12Q6UB98 2062 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 RIPK4P57078 832 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 SETD1AO15047 1707 aaKnown RBP5.83□□□□□ -1.48
PTPN13-209ENST00000511467 MCM5P33992 734 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 LRRC45Q96CN5 670 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 FBXO3Q9UK99 471 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 MAP3K5Q99683 1374 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 A0A0G2JS52 829 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 CYB5RLQ6IPT4 315 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 CCDC83Q8IWF9 413 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 ABTB2Q8N961 1025 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 CCDC94Q9BW85 323 aaPredicted RBP5.83□□□□□ -1.48
PTPN13-209ENST00000511467 TSPYL4Q9UJ04 414 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 ERBB4Q15303 1308 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 ERVK-7P63135 1459 aa5.83□□□□□ -1.48
PTPN13-209ENST00000511467 GNAT2P19087 354 aa5.82□□□□□ -1.48
PTPN13-209ENST00000511467 KRI1Q8N9T8 703 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms