RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ITPK1Q13572 414 aa18.19■□□□□ 0.5
SNF8-206ENST00000509989 RALBP1Q15311 655 aa18.19■□□□□ 0.5
SNF8-206ENST00000509989 UBR3Q6ZT12 1888 aa18.19■□□□□ 0.5
SNF8-206ENST00000509989 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
SNF8-206ENST00000509989 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
SNF8-206ENST00000509989 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
SNF8-206ENST00000509989 CABP4P57796 275 aa18.18■□□□□ 0.5
SNF8-206ENST00000509989 MRC1P22897 1456 aa18.18■□□□□ 0.5
SNF8-206ENST00000509989 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
SNF8-206ENST00000509989 TJP1Q07157 1748 aa18.18■□□□□ 0.5
SNF8-206ENST00000509989 HSP90AB1P08238 724 aaKnown RBP18.17■□□□□ 0.5
SNF8-206ENST00000509989 LINC00116Q8NCU8 138 aa18.17■□□□□ 0.5
SNF8-206ENST00000509989 IL17REQ8NFR9 667 aa18.17■□□□□ 0.5
SNF8-206ENST00000509989 PRKRIP1Q9H875 184 aaPredicted RBP18.17■□□□□ 0.5
SNF8-206ENST00000509989 NUDCQ9Y266 331 aa18.17■□□□□ 0.5
SNF8-206ENST00000509989 LOC102724428A0A0B4J2F2 783 aa18.16■□□□□ 0.5
SNF8-206ENST00000509989 SIK1P57059 783 aa18.16■□□□□ 0.5
SNF8-206ENST00000509989 SLC39A6Q13433 755 aa18.16■□□□□ 0.5
SNF8-206ENST00000509989 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
SNF8-206ENST00000509989 MYBBP1AQ9BQG0 1328 aaKnown RBP18.16■□□□□ 0.5
SNF8-206ENST00000509989 CCDC184Q52MB2 194 aa18.15■□□□□ 0.5
SNF8-206ENST00000509989 SMARCC1Q92922 1105 aaPredicted RBP18.15■□□□□ 0.5
SNF8-206ENST00000509989 SLC52A2Q9HAB3 445 aa18.15■□□□□ 0.5
SNF8-206ENST00000509989 MAP3K5Q99683 1374 aa18.15■□□□□ 0.5
SNF8-206ENST00000509989 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
SNF8-206ENST00000509989 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
SNF8-206ENST00000509989 ZNF831Q5JPB2 1677 aa18.14■□□□□ 0.49
SNF8-206ENST00000509989 UBR2Q8IWV8 1755 aa18.14■□□□□ 0.49
SNF8-206ENST00000509989 COL24A1Q17RW2 1714 aa18.13■□□□□ 0.49
SNF8-206ENST00000509989 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
SNF8-206ENST00000509989 FCHSD2O94868 740 aa18.13■□□□□ 0.49
SNF8-206ENST00000509989 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
SNF8-206ENST00000509989 DCTN1Q14203 1278 aa18.13■□□□□ 0.49
SNF8-206ENST00000509989 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
SNF8-206ENST00000509989 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
SNF8-206ENST00000509989 TFCP2L1Q9NZI6 479 aa18.12■□□□□ 0.49
SNF8-206ENST00000509989 GNAT3A8MTJ3 354 aa18.11■□□□□ 0.49
SNF8-206ENST00000509989 PTGER2P43116 358 aa18.11■□□□□ 0.49
SNF8-206ENST00000509989 MCM10Q7L590 875 aa18.11■□□□□ 0.49
SNF8-206ENST00000509989 GAS2L2Q8NHY3 880 aa18.11■□□□□ 0.49
SNF8-206ENST00000509989 KCNQ3O43525 872 aa18.1■□□□□ 0.49
SNF8-206ENST00000509989 SGIP1Q9BQI5 828 aa18.09■□□□□ 0.49
SNF8-206ENST00000509989 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
SNF8-206ENST00000509989 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.49
SNF8-206ENST00000509989 CCDC146Q8IYE0 955 aa18.08■□□□□ 0.48
SNF8-206ENST00000509989 SPON1Q9HCB6 807 aa18.08■□□□□ 0.48
SNF8-206ENST00000509989 PHF14O94880 888 aa18.07■□□□□ 0.48
SNF8-206ENST00000509989 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
SNF8-206ENST00000509989 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
SNF8-206ENST00000509989 MSL1Q68DK7 614 aa18.06■□□□□ 0.48
SNF8-206ENST00000509989 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
SNF8-206ENST00000509989 MSH5O43196 834 aa18.05■□□□□ 0.48
SNF8-206ENST00000509989 AK7Q96M32 723 aa18.05■□□□□ 0.48
SNF8-206ENST00000509989 MTFR1LQ9H019 292 aa18.05■□□□□ 0.48
SNF8-206ENST00000509989 ADAMTS8Q9UP79 889 aa18.05■□□□□ 0.48
SNF8-206ENST00000509989 GNPATO15228 680 aa18.04■□□□□ 0.48
SNF8-206ENST00000509989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
SNF8-206ENST00000509989 ZNF496Q96IT1 587 aaPredicted RBP18.03■□□□□ 0.48
SNF8-206ENST00000509989 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
SNF8-206ENST00000509989 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
SNF8-206ENST00000509989 KDM3BQ7LBC6 1761 aa18.03■□□□□ 0.48
SNF8-206ENST00000509989 SENP3-EIF4A1A0A087X0R7 540 aa18.02■□□□□ 0.48
SNF8-206ENST00000509989 TEFQ10587 303 aa18.02■□□□□ 0.48
SNF8-206ENST00000509989 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
SNF8-206ENST00000509989 PRAMEF22A3QJZ6 481 aa18.01■□□□□ 0.47
SNF8-206ENST00000509989 CRKLP46109 303 aaKnown RBP18.01■□□□□ 0.47
SNF8-206ENST00000509989 INTS5Q6P9B9 1019 aaKnown RBP18.01■□□□□ 0.47
SNF8-206ENST00000509989 ZNF790Q6PG37 636 aa18■□□□□ 0.47
SNF8-206ENST00000509989 CNTNAP4Q9C0A0 1308 aa17.99■□□□□ 0.47
SNF8-206ENST00000509989 BTBD11A6QL63 1104 aa17.99■□□□□ 0.47
SNF8-206ENST00000509989 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
SNF8-206ENST00000509989 PPP1R1BQ9UD71 204 aaPredicted RBP17.99■□□□□ 0.47
SNF8-206ENST00000509989 MAPK8IP3Q9UPT6 1336 aa17.98■□□□□ 0.47
SNF8-206ENST00000509989 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
SNF8-206ENST00000509989 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
SNF8-206ENST00000509989 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
SNF8-206ENST00000509989 SLC16A10Q8TF71 515 aa17.98■□□□□ 0.47
SNF8-206ENST00000509989 RTF1Q92541 710 aaKnown RBP17.98■□□□□ 0.47
SNF8-206ENST00000509989 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
SNF8-206ENST00000509989 HEG1Q9ULI3 1381 aa17.97■□□□□ 0.47
SNF8-206ENST00000509989 RPS6KA4O75676 772 aa17.97■□□□□ 0.47
SNF8-206ENST00000509989 SSFA2P28290 1259 aa17.97■□□□□ 0.47
SNF8-206ENST00000509989 RIPK4P57078 832 aa17.97■□□□□ 0.47
SNF8-206ENST00000509989 WDR43Q15061 677 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNF8-206ENST00000509989 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
SNF8-206ENST00000509989 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
SNF8-206ENST00000509989 HTATSF1O43719 755 aaKnown RBP17.96■□□□□ 0.47
SNF8-206ENST00000509989 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
SNF8-206ENST00000509989 ARXQ96QS3 562 aa17.96■□□□□ 0.47
SNF8-206ENST00000509989 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
SNF8-206ENST00000509989 RTCBQ9Y3I0 505 aaKnown RBP17.96■□□□□ 0.47
SNF8-206ENST00000509989 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
SNF8-206ENST00000509989 TRIM35Q9UPQ4 493 aa17.95■□□□□ 0.46
SNF8-206ENST00000509989 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
SNF8-206ENST00000509989 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
SNF8-206ENST00000509989 RUNDC1Q96C34 613 aa17.94■□□□□ 0.46
SNF8-206ENST00000509989 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
SNF8-206ENST00000509989 USP16Q9Y5T5 823 aa17.94■□□□□ 0.46
SNF8-206ENST00000509989 ANP32CO43423 234 aa17.93■□□□□ 0.46
SNF8-206ENST00000509989 NEFMP07197 916 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms