RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 NCOA4Q13772 614 aa9.15□□□□□ -0.94
CALCOCO2-212ENST00000509014 CTC1Q2NKJ3 1217 aa9.15□□□□□ -0.94
CALCOCO2-212ENST00000509014 CC2D2BQ6DHV5 1058 aa9.15□□□□□ -0.94
CALCOCO2-212ENST00000509014 Q6ZVU0 165 aa9.15□□□□□ -0.94
CALCOCO2-212ENST00000509014 CCDC97Q96F63 343 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-212ENST00000509014 SERPINA10Q9UK55 444 aa9.15□□□□□ -0.94
CALCOCO2-212ENST00000509014 MEIOBQ8N635 442 aa9.14□□□□□ -0.95
CALCOCO2-212ENST00000509014 OSBPL3Q9H4L5 887 aa9.14□□□□□ -0.95
CALCOCO2-212ENST00000509014 HECW2Q9P2P5 1572 aa9.13□□□□□ -0.95
CALCOCO2-212ENST00000509014 WFS1O76024 890 aa9.13□□□□□ -0.95
CALCOCO2-212ENST00000509014 KDF1Q8NAX2 398 aaPredicted RBP9.13□□□□□ -0.95
CALCOCO2-212ENST00000509014 ADGRL1O94910 1474 aa9.13□□□□□ -0.95
CALCOCO2-212ENST00000509014 LZTS3O60299 673 aaPredicted RBP9.12□□□□□ -0.95
CALCOCO2-212ENST00000509014 ADH1AP07327 375 aa9.11□□□□□ -0.95
CALCOCO2-212ENST00000509014 LMOD1P29536 600 aaPredicted RBP9.11□□□□□ -0.95
CALCOCO2-212ENST00000509014 USP4Q13107 963 aa9.11□□□□□ -0.95
CALCOCO2-212ENST00000509014 EML3Q32P44 896 aa9.11□□□□□ -0.95
CALCOCO2-212ENST00000509014 BMP1P13497 986 aa9.1□□□□□ -0.95
CALCOCO2-212ENST00000509014 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
CALCOCO2-212ENST00000509014 KANK4Q5T7N3 995 aaPredicted RBP9.1□□□□□ -0.95
CALCOCO2-212ENST00000509014 TRIM46Q7Z4K8 759 aa9.1□□□□□ -0.95
CALCOCO2-212ENST00000509014 AGBL1Q96MI9 1066 aa9.1□□□□□ -0.95
CALCOCO2-212ENST00000509014 MYCP01106 439 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-212ENST00000509014 PCDHGA11Q9Y5H2 935 aa9.09□□□□□ -0.95
CALCOCO2-212ENST00000509014 GLI2P10070 1586 aa9.08□□□□□ -0.96
CALCOCO2-212ENST00000509014 RFX1P22670 979 aa9.08□□□□□ -0.96
CALCOCO2-212ENST00000509014 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
CALCOCO2-212ENST00000509014 SIRT1Q96EB6 747 aa9.08□□□□□ -0.96
CALCOCO2-212ENST00000509014 MKRN1Q9UHC7 482 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-212ENST00000509014 NOD1Q9Y239 953 aa9.08□□□□□ -0.96
CALCOCO2-212ENST00000509014 CUL7Q14999 1698 aa9.07□□□□□ -0.96
CALCOCO2-212ENST00000509014 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.07□□□□□ -0.96
CALCOCO2-212ENST00000509014 CLDN10P78369 228 aa9.07□□□□□ -0.96
CALCOCO2-212ENST00000509014 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
CALCOCO2-212ENST00000509014 LINC00528Q8N1L1 170 aa9.07□□□□□ -0.96
CALCOCO2-212ENST00000509014 KIAA1024Q9UPX6 916 aa9.07□□□□□ -0.96
CALCOCO2-212ENST00000509014 COL17A1Q9UMD9 1497 aaPredicted RBP9.07□□□□□ -0.96
CALCOCO2-212ENST00000509014 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 STAU1O95793 577 aaKnown RBP9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 PTGIRP43119 386 aa9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 GTF2IP78347 998 aa9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 RELBQ01201 579 aa9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 NFX1Q12986 1120 aaKnown RBP9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 CYP2U1Q7Z449 544 aa9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 ARID3AQ99856 593 aa9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 ATP13A2Q9NQ11 1180 aa9.06□□□□□ -0.96
CALCOCO2-212ENST00000509014 KIAA0586Q9BVV6 1533 aa9.05□□□□□ -0.96
CALCOCO2-212ENST00000509014 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
CALCOCO2-212ENST00000509014 MAP3K4Q9Y6R4 1608 aa9.05□□□□□ -0.96
CALCOCO2-212ENST00000509014 ZBTB7BO15156 539 aaPredicted RBP9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 DKK1O94907 266 aa9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 SCNN1DP51172 638 aa9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 CRTC2Q53ET0 693 aaPredicted RBP9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 TRIM50Q86XT4 487 aa9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 OGFOD1Q8N543 542 aa9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 ESF1Q9H501 851 aaKnown RBP9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 VRTNQ9H8Y1 702 aa9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 ARHGEF10LQ9HCE6 1279 aa9.04□□□□□ -0.96
CALCOCO2-212ENST00000509014 SPINT1O43278 529 aa9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 GNRH1P01148 92 aa9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 SNRPBP14678 240 aaKnown RBP9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 CDCA8Q53HL2 280 aa9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 C6orf118Q5T5N4 469 aa9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 PURBQ96QR8 312 aaKnown RBP9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 ETNK1Q9HBU6 452 aa9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 RAB6BQ9NRW1 208 aa9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 ABCC2Q92887 1545 aa9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 ASXL2Q76L83 1435 aa9.03□□□□□ -0.96
CALCOCO2-212ENST00000509014 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 TMEM229AB2RXF0 380 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 IL2RAP01589 272 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 RASA1P20936 1047 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 PTK7Q13308 1070 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 ZFP42Q96MM3 310 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 DNAAF2Q9NVR5 837 aaKnown RBP9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 STK17AQ9UEE5 414 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 PLB1Q6P1J6 1458 aa9.02□□□□□ -0.97
CALCOCO2-212ENST00000509014 FAM196BA6NMK8 535 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L10C9JJH3 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L12C9JPN9 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L21D6R901 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 UPP2O95045 317 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 BMP2P12643 396 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 PTPRGP23470 1445 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 ATP1A2P50993 1020 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 CLN3Q13286 438 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 SIX5Q8N196 739 aa9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 ZNF594Q96JF6 807 aaPredicted RBP9.01□□□□□ -0.97
CALCOCO2-212ENST00000509014 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms