RNA–Protein interactions for RNA: ENST00000508929.1

ABCC3-209, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 2

Gene ABCC3, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-209ENST00000508929 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
ABCC3-209ENST00000508929 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
ABCC3-209ENST00000508929 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.46
ABCC3-209ENST00000508929 TRIM27P14373 513 aa12.15□□□□□ -0.46
ABCC3-209ENST00000508929 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
ABCC3-209ENST00000508929 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
ABCC3-209ENST00000508929 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
ABCC3-209ENST00000508929 BTG4Q9NY30 223 aa12.15□□□□□ -0.46
ABCC3-209ENST00000508929 JCADQ9P266 1359 aa12.15□□□□□ -0.46
ABCC3-209ENST00000508929 PHLPP1O60346 1717 aa12.14□□□□□ -0.47
ABCC3-209ENST00000508929 IL2RBP14784 551 aa12.14□□□□□ -0.47
ABCC3-209ENST00000508929 PHKG2P15735 406 aa12.14□□□□□ -0.47
ABCC3-209ENST00000508929 TEFQ10587 303 aa12.14□□□□□ -0.47
ABCC3-209ENST00000508929 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
ABCC3-209ENST00000508929 ZCRB1Q8TBF4 217 aaKnown RBP12.14□□□□□ -0.47
ABCC3-209ENST00000508929 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
ABCC3-209ENST00000508929 CDCA7Q9BWT1 371 aaPredicted RBP12.14□□□□□ -0.47
ABCC3-209ENST00000508929 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
ABCC3-209ENST00000508929 DDX19BQ9UMR2 479 aa12.14□□□□□ -0.47
ABCC3-209ENST00000508929 COL14A1Q05707 1796 aaKnown RBP12.14□□□□□ -0.47
ABCC3-209ENST00000508929 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
ABCC3-209ENST00000508929 HOXB7P09629 217 aa12.13□□□□□ -0.47
ABCC3-209ENST00000508929 NKX1-1Q15270 411 aaPredicted RBP12.13□□□□□ -0.47
ABCC3-209ENST00000508929 LARP1Q6PKG0 1096 aaKnown RBP12.13□□□□□ -0.47
ABCC3-209ENST00000508929 LGR6Q9HBX8 967 aa12.13□□□□□ -0.47
ABCC3-209ENST00000508929 SPATA31A6Q5VVP1 1343 aa12.12□□□□□ -0.47
ABCC3-209ENST00000508929 LRRC37A3O60309 1634 aa12.12□□□□□ -0.47
ABCC3-209ENST00000508929 SEC24BO95487 1268 aa12.12□□□□□ -0.47
ABCC3-209ENST00000508929 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
ABCC3-209ENST00000508929 MPRIPQ6WCQ1 1025 aa12.12□□□□□ -0.47
ABCC3-209ENST00000508929 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
ABCC3-209ENST00000508929 TSPYL6Q8N831 410 aa12.12□□□□□ -0.47
ABCC3-209ENST00000508929 STRN4Q9NRL3 753 aa12.12□□□□□ -0.47
ABCC3-209ENST00000508929 THRAP3Q9Y2W1 955 aaKnown RBP12.12□□□□□ -0.47
ABCC3-209ENST00000508929 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
ABCC3-209ENST00000508929 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
ABCC3-209ENST00000508929 MEGF6O75095 1541 aa12.11□□□□□ -0.47
ABCC3-209ENST00000508929 CYP27B1O15528 508 aa12.11□□□□□ -0.47
ABCC3-209ENST00000508929 NFKBIBQ15653 356 aa12.11□□□□□ -0.47
ABCC3-209ENST00000508929 SMC5Q8IY18 1101 aa12.11□□□□□ -0.47
ABCC3-209ENST00000508929 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
ABCC3-209ENST00000508929 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
ABCC3-209ENST00000508929 ERVV-2B6SEH9 535 aa12.1□□□□□ -0.47
ABCC3-209ENST00000508929 TMEM57Q8N5G2 664 aa12.1□□□□□ -0.47
ABCC3-209ENST00000508929 TBC1D32Q96NH3 1257 aa12.1□□□□□ -0.47
ABCC3-209ENST00000508929 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
ABCC3-209ENST00000508929 ZBTB40Q9NUA8 1239 aa12.1□□□□□ -0.47
ABCC3-209ENST00000508929 MIS18AQ9NYP9 233 aa12.1□□□□□ -0.47
ABCC3-209ENST00000508929 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
ABCC3-209ENST00000508929 EIF4A1P60842 406 aaKnown RBP12.09□□□□□ -0.47
ABCC3-209ENST00000508929 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
ABCC3-209ENST00000508929 ITPRIPQ8IWB1 547 aa12.09□□□□□ -0.47
ABCC3-209ENST00000508929 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
ABCC3-209ENST00000508929 SLC52A2Q9HAB3 445 aa12.09□□□□□ -0.47
ABCC3-209ENST00000508929 ELL2O00472 640 aaPredicted RBP12.08□□□□□ -0.48
ABCC3-209ENST00000508929 ADAMTS2O95450 1211 aa12.08□□□□□ -0.48
ABCC3-209ENST00000508929 BECN1Q14457 450 aa12.08□□□□□ -0.48
ABCC3-209ENST00000508929 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.48
ABCC3-209ENST00000508929 PTPRCP08575 1304 aa12.08□□□□□ -0.48
ABCC3-209ENST00000508929 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
ABCC3-209ENST00000508929 DISP2A7MBM2 1401 aa12.07□□□□□ -0.48
ABCC3-209ENST00000508929 HSPA1LP34931 641 aa12.07□□□□□ -0.48
ABCC3-209ENST00000508929 BARGINQ6ZT62 677 aa12.07□□□□□ -0.48
ABCC3-209ENST00000508929 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
ABCC3-209ENST00000508929 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
ABCC3-209ENST00000508929 SLIT2O94813 1529 aa12.06□□□□□ -0.48
ABCC3-209ENST00000508929 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
ABCC3-209ENST00000508929 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
ABCC3-209ENST00000508929 NUTM2BA6NNL0 878 aaPredicted RBP12.06□□□□□ -0.48
ABCC3-209ENST00000508929 NUTM2EB1AL46 878 aaPredicted RBP12.06□□□□□ -0.48
ABCC3-209ENST00000508929 UNC5CLQ8IV45 518 aa12.06□□□□□ -0.48
ABCC3-209ENST00000508929 NUTM2AQ8IVF1 878 aaPredicted RBP12.06□□□□□ -0.48
ABCC3-209ENST00000508929 STK31Q9BXU1 1019 aa12.06□□□□□ -0.48
ABCC3-209ENST00000508929 ABCC4O15439 1325 aa12.06□□□□□ -0.48
ABCC3-209ENST00000508929 SPATA31A1Q5TZJ5 1347 aa12.06□□□□□ -0.48
ABCC3-209ENST00000508929 SPATA31A5Q5VU36 1347 aa12.06□□□□□ -0.48
ABCC3-209ENST00000508929 SPATA31A7Q8IWB4 1347 aa12.06□□□□□ -0.48
ABCC3-209ENST00000508929 EXOC5O00471 708 aa12.05□□□□□ -0.48
ABCC3-209ENST00000508929 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
ABCC3-209ENST00000508929 CABP4P57796 275 aa12.05□□□□□ -0.48
ABCC3-209ENST00000508929 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
ABCC3-209ENST00000508929 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
ABCC3-209ENST00000508929 NFATC2IPQ8NCF5 419 aa12.05□□□□□ -0.48
ABCC3-209ENST00000508929 MRC1P22897 1456 aa12.05□□□□□ -0.48
ABCC3-209ENST00000508929 NWD2Q9ULI1 1742 aa12.04□□□□□ -0.48
ABCC3-209ENST00000508929 GIGYF1O75420 1035 aaPredicted RBP12.04□□□□□ -0.48
ABCC3-209ENST00000508929 NUCB1Q02818 461 aa12.04□□□□□ -0.48
ABCC3-209ENST00000508929 VPS72Q15906 364 aa12.04□□□□□ -0.48
ABCC3-209ENST00000508929 NGLY1Q96IV0 654 aa12.04□□□□□ -0.48
ABCC3-209ENST00000508929 HDGFL1Q5TGJ6 251 aa12.02□□□□□ -0.49
ABCC3-209ENST00000508929 INTS3Q68E01 1043 aaKnown RBP12.02□□□□□ -0.49
ABCC3-209ENST00000508929 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
ABCC3-209ENST00000508929 ANTXR1Q9H6X2 564 aa12.02□□□□□ -0.49
ABCC3-209ENST00000508929 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.49
ABCC3-209ENST00000508929 KDM3BQ7LBC6 1761 aa12.01□□□□□ -0.49
ABCC3-209ENST00000508929 ZBTB7BO15156 539 aaPredicted RBP12.01□□□□□ -0.49
ABCC3-209ENST00000508929 KCNQ3O43525 872 aa12.01□□□□□ -0.49
ABCC3-209ENST00000508929 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
ABCC3-209ENST00000508929 GSE1Q14687 1217 aa12.01□□□□□ -0.49
ABCC3-209ENST00000508929 TTC5Q8N0Z6 440 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms