RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 FCHSD2O94868 740 aa22.59■■□□□ 1.21
CLDND1-219ENST00000508659 NFATC2IPQ8NCF5 419 aa22.59■■□□□ 1.21
CLDND1-219ENST00000508659 QSER1Q2KHR3 1735 aa22.59■■□□□ 1.21
CLDND1-219ENST00000508659 C4BP0C0L5 1744 aa22.58■■□□□ 1.21
CLDND1-219ENST00000508659 RNMTO43148 476 aaKnown RBP22.58■■□□□ 1.21
CLDND1-219ENST00000508659 ZBTB7AO95365 584 aa22.58■■□□□ 1.21
CLDND1-219ENST00000508659 SLC52A2Q9HAB3 445 aa22.58■■□□□ 1.21
CLDND1-219ENST00000508659 PNPLA7Q6ZV29 1317 aa22.57■■□□□ 1.2
CLDND1-219ENST00000508659 GNAT3A8MTJ3 354 aa22.57■■□□□ 1.2
CLDND1-219ENST00000508659 NEFMP07197 916 aa22.57■■□□□ 1.2
CLDND1-219ENST00000508659 ATP6V1AP38606 617 aa22.57■■□□□ 1.2
CLDND1-219ENST00000508659 AK7Q96M32 723 aa22.57■■□□□ 1.2
CLDND1-219ENST00000508659 RBM42Q9BTD8 480 aaKnown RBP22.57■■□□□ 1.2
CLDND1-219ENST00000508659 LGR6Q9HBX8 967 aa22.57■■□□□ 1.2
CLDND1-219ENST00000508659 PHACTR3Q96KR7 559 aa22.56■■□□□ 1.2
CLDND1-219ENST00000508659 MTFR1LQ9H019 292 aa22.56■■□□□ 1.2
CLDND1-219ENST00000508659 TAF1LQ8IZX4 1826 aa22.56■■□□□ 1.2
CLDND1-219ENST00000508659 TUBGCP6Q96RT7 1819 aa22.56■■□□□ 1.2
CLDND1-219ENST00000508659 PRKRIP1Q9H875 184 aaPredicted RBP22.55■■□□□ 1.2
CLDND1-219ENST00000508659 LINC00116Q8NCU8 138 aa22.54■■□□□ 1.2
CLDND1-219ENST00000508659 PPP1R1BQ9UD71 204 aaPredicted RBP22.54■■□□□ 1.2
CLDND1-219ENST00000508659 ITPK1Q13572 414 aa22.53■■□□□ 1.2
CLDND1-219ENST00000508659 ZNF831Q5JPB2 1677 aa22.52■■□□□ 1.2
CLDND1-219ENST00000508659 PTCD1O75127 700 aaKnown RBP22.52■■□□□ 1.2
CLDND1-219ENST00000508659 TEFQ10587 303 aa22.52■■□□□ 1.2
CLDND1-219ENST00000508659 MSH5O43196 834 aa22.51■■□□□ 1.19
CLDND1-219ENST00000508659 PNNQ9H307 717 aaKnown RBP22.51■■□□□ 1.19
CLDND1-219ENST00000508659 ATF5Q9Y2D1 282 aaPredicted RBP22.51■■□□□ 1.19
CLDND1-219ENST00000508659 MAPK8IP3Q9UPT6 1336 aa22.51■■□□□ 1.19
CLDND1-219ENST00000508659 VIRMAQ69YN4 1812 aaKnown RBP22.5■■□□□ 1.19
CLDND1-219ENST00000508659 RTF1Q92541 710 aaKnown RBP22.5■■□□□ 1.19
CLDND1-219ENST00000508659 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
CLDND1-219ENST00000508659 FLAD1Q8NFF5 587 aa22.49■■□□□ 1.19
CLDND1-219ENST00000508659 SLC16A10Q8TF71 515 aa22.49■■□□□ 1.19
CLDND1-219ENST00000508659 SLC4A9Q96Q91 983 aa22.49■■□□□ 1.19
CLDND1-219ENST00000508659 CICQ96RK0 1608 aaPredicted RBP22.49■■□□□ 1.19
CLDND1-219ENST00000508659 GNPATO15228 680 aa22.48■■□□□ 1.19
CLDND1-219ENST00000508659 PHF14O94880 888 aa22.48■■□□□ 1.19
CLDND1-219ENST00000508659 IL17REQ8NFR9 667 aa22.48■■□□□ 1.19
CLDND1-219ENST00000508659 COL5A3P25940 1745 aaPredicted RBP22.48■■□□□ 1.19
CLDND1-219ENST00000508659 KCPQ6ZWJ8 1503 aa22.47■■□□□ 1.19
CLDND1-219ENST00000508659 SSFA2P28290 1259 aa22.47■■□□□ 1.19
CLDND1-219ENST00000508659 PTGER2P43116 358 aa22.47■■□□□ 1.19
CLDND1-219ENST00000508659 SLC39A6Q13433 755 aa22.47■■□□□ 1.19
CLDND1-219ENST00000508659 WDR43Q15061 677 aaKnown RBP eCLIP22.47■■□□□ 1.19
CLDND1-219ENST00000508659 TTC5Q8N0Z6 440 aa22.47■■□□□ 1.19
CLDND1-219ENST00000508659 COL23A1Q86Y22 540 aaPredicted RBP22.46■■□□□ 1.19
CLDND1-219ENST00000508659 PLEKHF1Q96S99 279 aa22.46■■□□□ 1.19
CLDND1-219ENST00000508659 CNTNAP4Q9C0A0 1308 aa22.46■■□□□ 1.19
CLDND1-219ENST00000508659 TJP1Q07157 1748 aa22.45■■□□□ 1.19
CLDND1-219ENST00000508659 UBR3Q6ZT12 1888 aa22.45■■□□□ 1.19
CLDND1-219ENST00000508659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.45■■□□□ 1.18
CLDND1-219ENST00000508659 SIPA1L3O60292 1781 aaPredicted RBP22.44■■□□□ 1.18
CLDND1-219ENST00000508659 POLD1P28340 1107 aa22.44■■□□□ 1.18
CLDND1-219ENST00000508659 MCM10Q7L590 875 aa22.44■■□□□ 1.18
CLDND1-219ENST00000508659 HTATSF1O43719 755 aaKnown RBP22.43■■□□□ 1.18
CLDND1-219ENST00000508659 AMIGO3Q86WK7 504 aa22.43■■□□□ 1.18
CLDND1-219ENST00000508659 SGIP1Q9BQI5 828 aa22.43■■□□□ 1.18
CLDND1-219ENST00000508659 UBR2Q8IWV8 1755 aa22.43■■□□□ 1.18
CLDND1-219ENST00000508659 NFE2L2Q16236 605 aa22.42■■□□□ 1.18
CLDND1-219ENST00000508659 RTCBQ9Y3I0 505 aaKnown RBP22.42■■□□□ 1.18
CLDND1-219ENST00000508659 BTBD11A6QL63 1104 aa22.41■■□□□ 1.18
CLDND1-219ENST00000508659 RC3H1Q5TC82 1133 aaKnown RBP22.41■■□□□ 1.18
CLDND1-219ENST00000508659 ZNF790Q6PG37 636 aa22.41■■□□□ 1.18
CLDND1-219ENST00000508659 CRKLP46109 303 aaKnown RBP22.4■■□□□ 1.18
CLDND1-219ENST00000508659 DCTN1Q14203 1278 aa22.4■■□□□ 1.18
CLDND1-219ENST00000508659 MSL1Q68DK7 614 aa22.4■■□□□ 1.18
CLDND1-219ENST00000508659 DNAJC10Q8IXB1 793 aa22.4■■□□□ 1.18
CLDND1-219ENST00000508659 ANP32CO43423 234 aa22.39■■□□□ 1.17
CLDND1-219ENST00000508659 SMIM5Q71RC9 77 aa22.39■■□□□ 1.17
CLDND1-219ENST00000508659 VSIG10Q8N0Z9 540 aa22.39■■□□□ 1.17
CLDND1-219ENST00000508659 ARXQ96QS3 562 aa22.39■■□□□ 1.17
CLDND1-219ENST00000508659 COL24A1Q17RW2 1714 aa22.38■■□□□ 1.17
CLDND1-219ENST00000508659 ADRA2BP18089 450 aa22.38■■□□□ 1.17
CLDND1-219ENST00000508659 TRAPPC3LQ5T215 181 aa22.37■■□□□ 1.17
CLDND1-219ENST00000508659 CCDC146Q8IYE0 955 aa22.37■■□□□ 1.17
CLDND1-219ENST00000508659 ZNF496Q96IT1 587 aaPredicted RBP22.37■■□□□ 1.17
CLDND1-219ENST00000508659 HEG1Q9ULI3 1381 aa22.37■■□□□ 1.17
CLDND1-219ENST00000508659 RPS6KA4O75676 772 aa22.36■■□□□ 1.17
CLDND1-219ENST00000508659 FMNL2Q96PY5 1086 aa22.36■■□□□ 1.17
CLDND1-219ENST00000508659 CCDC87Q9NVE4 849 aa22.36■■□□□ 1.17
CLDND1-219ENST00000508659 DLG5Q8TDM6 1919 aa22.34■■□□□ 1.17
CLDND1-219ENST00000508659 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-219ENST00000508659 LMOD3Q0VAK6 560 aa22.34■■□□□ 1.17
CLDND1-219ENST00000508659 RUNDC1Q96C34 613 aa22.34■■□□□ 1.17
CLDND1-219ENST00000508659 FHDC1Q9C0D6 1143 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-219ENST00000508659 ADAMTS8Q9UP79 889 aa22.34■■□□□ 1.17
CLDND1-219ENST00000508659 RFC4P35249 363 aa22.33■■□□□ 1.17
CLDND1-219ENST00000508659 RIPK4P57078 832 aa22.33■■□□□ 1.17
CLDND1-219ENST00000508659 KLHL34Q8N239 644 aa22.33■■□□□ 1.17
CLDND1-219ENST00000508659 C4AP0C0L4 1744 aa22.33■■□□□ 1.17
CLDND1-219ENST00000508659 STARD3NLO95772 234 aa22.32■■□□□ 1.16
CLDND1-219ENST00000508659 TMPOP42166 694 aaKnown RBP22.32■■□□□ 1.16
CLDND1-219ENST00000508659 TAF7Q15545 349 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-219ENST00000508659 INTS5Q6P9B9 1019 aaKnown RBP22.32■■□□□ 1.16
CLDND1-219ENST00000508659 ARHGEF1Q92888 912 aaKnown RBP22.32■■□□□ 1.16
CLDND1-219ENST00000508659 THUMPD2Q9BTF0 503 aaKnown RBP22.32■■□□□ 1.16
CLDND1-219ENST00000508659 MYH14Q7Z406 1995 aaKnown RBP22.31■■□□□ 1.16
CLDND1-219ENST00000508659 KCNQ3O43525 872 aa22.31■■□□□ 1.16
CLDND1-219ENST00000508659 PNISRQ8TF01 805 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms