RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 K7ELQ4 463 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 MAP3K7O43318 606 aa6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 TERF1P54274 439 aa6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 NUCB2P80303 420 aa6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 EN1Q05925 392 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 HS1BP3Q53T59 392 aa6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 CASC1Q6TDU7 716 aa6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 SSH1Q8WYL5 1049 aa6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 NOB1Q9ULX3 412 aaKnown RBP6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 KIF24Q5T7B8 1368 aa6.15□□□□□ -1.43
HMGB3P16-201ENST00000508037 PPIP5K1Q6PFW1 1433 aa6.15□□□□□ -1.43
HMGB3P16-201ENST00000508037 ASXL2Q76L83 1435 aa6.15□□□□□ -1.43
HMGB3P16-201ENST00000508037 MROH2AA6NES4 1674 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 U2SURPO15042 1029 aaKnown RBP6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 DIAPH1O60610 1272 aaKnown RBP6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 CDC45O75419 566 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 FCHSD2O94868 740 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 LMOD3Q0VAK6 560 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 RABEP1Q15276 862 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 HDGFL2Q7Z4V5 671 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 TMEM57Q8N5G2 664 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 TNPO1Q92973 898 aaKnown RBP6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 PLEKHF1Q96S99 279 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 NBPF3Q9H094 633 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 CWC22Q9HCG8 908 aaKnown RBP6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 PIK3R4Q99570 1358 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 ARHGAP31Q2M1Z3 1444 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 UGGT1Q9NYU2 1555 aa6.14□□□□□ -1.43
HMGB3P16-201ENST00000508037 GOLGA8CPA6NN73 597 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 COL9A1P20849 921 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 MSNP26038 577 aaKnown RBP6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 RIPK4P57078 832 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 GNAI1P63096 354 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 KLHL40Q2TBA0 621 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 ZSCAN30Q86W11 494 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 PPP1R9BQ96SB3 815 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 MAP7D2Q96T17 732 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 PANK2Q9BZ23 570 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 API5Q9BZZ5 524 aaKnown RBP6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 TNNQ9UQP3 1299 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 COL3A1P02461 1466 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 GLI2P10070 1586 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 ERCC6L2Q5T890 1561 aa6.13□□□□□ -1.43
HMGB3P16-201ENST00000508037 MCM5P33992 734 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 NASPP49321 788 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 PTCH1Q13635 1447 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 NPATQ14207 1427 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 CDC42BPGQ6DT37 1551 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 MTERF4Q7Z6M4 381 aaKnown RBP6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 PNPLA6Q8IY17 1366 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 MRPL50Q8N5N7 158 aaKnown RBP6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 TSR2Q969E8 191 aaKnown RBP6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 ARXQ96QS3 562 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 TULP4Q9NRJ4 1543 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 HECW2Q9P2P5 1572 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 MLH3Q9UHC1 1453 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 RABGEF1Q9UJ41 708 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 ANKRD26Q9UPS8 1709 aa6.12□□□□□ -1.43
HMGB3P16-201ENST00000508037 ARHGEF28Q8N1W1 1705 aaKnown RBP6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 FRMPD1Q5SYB0 1578 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 CD109Q6YHK3 1445 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 YEATS2Q9ULM3 1422 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 A0A1W2PP64 1363 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 BHMG1C9JSJ3 638 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 ONECUT3O60422 494 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 OSBPP22059 807 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 ZNF445P59923 1031 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 SRPK2P78362 688 aaKnown RBP6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 CSPP1Q1MSJ5 1256 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 PROX2Q3B8N5 592 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 ANKRD45Q5TZF3 282 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 VSIG10Q8N0Z9 540 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 CERKQ8TCT0 537 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 LNPKQ9C0E8 428 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 PDCL3Q9H2J4 239 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 IFT57Q9NWB7 429 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 SLC52A1Q9NWF4 448 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 DDX49Q9Y6V7 483 aaKnown RBP6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 KIDINS220Q9ULH0 1771 aa6.11□□□□□ -1.43
HMGB3P16-201ENST00000508037 ABCC3O15438 1527 aa6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 ZBTB7BO15156 539 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 REC8O95072 547 aa6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 NFE2L2Q16236 605 aa6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 TSR1Q2NL82 804 aaKnown RBP6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 INTS3Q68E01 1043 aaKnown RBP6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 TBC1D9Q6ZT07 1266 aa6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 KCTD12Q96CX2 325 aaKnown RBP6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 HCSTQ9UBK5 93 aa6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 PIK3C2BO00750 1634 aa6.1□□□□□ -1.43
HMGB3P16-201ENST00000508037 FAM135BQ49AJ0 1406 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 POGZQ7Z3K3 1410 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 ABCC4O15439 1325 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 TRIM6-TRIM34B2RNG4 842 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 OFD1O75665 1012 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 BAG4O95429 457 aaKnown RBP6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 MBD3O95983 291 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 MCM2P49736 904 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 TMEM132EQ6IEE7 984 aa6.09□□□□□ -1.43
HMGB3P16-201ENST00000508037 RPAP2Q8IXW5 612 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms