RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 RNMTO43148 476 aaKnown RBP17.75■□□□□ 0.43
UBE2D3-221ENST00000507845 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
UBE2D3-221ENST00000507845 RIPK4P57078 832 aa17.75■□□□□ 0.43
UBE2D3-221ENST00000507845 ACSBG1Q96GR2 724 aa17.75■□□□□ 0.43
UBE2D3-221ENST00000507845 LGR6Q9HBX8 967 aa17.75■□□□□ 0.43
UBE2D3-221ENST00000507845 MRC1P22897 1456 aa17.75■□□□□ 0.43
UBE2D3-221ENST00000507845 IL17REQ8NFR9 667 aa17.74■□□□□ 0.43
UBE2D3-221ENST00000507845 CEMIPQ8WUJ3 1361 aa17.74■□□□□ 0.43
UBE2D3-221ENST00000507845 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
UBE2D3-221ENST00000507845 KCNQ2O43526 872 aa17.73■□□□□ 0.43
UBE2D3-221ENST00000507845 PRIM1P49642 420 aaKnown RBP17.73■□□□□ 0.43
UBE2D3-221ENST00000507845 NEUROD2Q15784 382 aa17.73■□□□□ 0.43
UBE2D3-221ENST00000507845 SENP3-EIF4A1A0A087X0R7 540 aa17.72■□□□□ 0.43
UBE2D3-221ENST00000507845 TRIM37O94972 964 aa17.72■□□□□ 0.43
UBE2D3-221ENST00000507845 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
UBE2D3-221ENST00000507845 MCM10Q7L590 875 aa17.72■□□□□ 0.43
UBE2D3-221ENST00000507845 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
UBE2D3-221ENST00000507845 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
UBE2D3-221ENST00000507845 TRIM35Q9UPQ4 493 aa17.72■□□□□ 0.43
UBE2D3-221ENST00000507845 LMOD3Q0VAK6 560 aa17.71■□□□□ 0.43
UBE2D3-221ENST00000507845 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
UBE2D3-221ENST00000507845 BCL11BQ9C0K0 894 aaPredicted RBP17.7■□□□□ 0.42
UBE2D3-221ENST00000507845 PAPPAQ13219 1627 aa17.69■□□□□ 0.42
UBE2D3-221ENST00000507845 CABP4P57796 275 aa17.69■□□□□ 0.42
UBE2D3-221ENST00000507845 PIGBQ92521 554 aa17.69■□□□□ 0.42
UBE2D3-221ENST00000507845 THUMPD2Q9BTF0 503 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-221ENST00000507845 SLC52A2Q9HAB3 445 aa17.69■□□□□ 0.42
UBE2D3-221ENST00000507845 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
UBE2D3-221ENST00000507845 NFATC2IPQ8NCF5 419 aa17.68■□□□□ 0.42
UBE2D3-221ENST00000507845 RGPD3A6NKT7 1758 aaPredicted RBP17.67■□□□□ 0.42
UBE2D3-221ENST00000507845 RGPD4Q7Z3J3 1758 aa17.67■□□□□ 0.42
UBE2D3-221ENST00000507845 TEFQ10587 303 aa17.67■□□□□ 0.42
UBE2D3-221ENST00000507845 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
UBE2D3-221ENST00000507845 NGEFQ8N5V2 710 aa17.67■□□□□ 0.42
UBE2D3-221ENST00000507845 LY75O60449 1722 aa17.67■□□□□ 0.42
UBE2D3-221ENST00000507845 KDM3BQ7LBC6 1761 aa17.66■□□□□ 0.42
UBE2D3-221ENST00000507845 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
UBE2D3-221ENST00000507845 UBR2Q8IWV8 1755 aa17.66■□□□□ 0.42
UBE2D3-221ENST00000507845 WWC1Q8IX03 1113 aa17.65■□□□□ 0.42
UBE2D3-221ENST00000507845 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBE2D3-221ENST00000507845 APBA3O96018 575 aa17.63■□□□□ 0.41
UBE2D3-221ENST00000507845 TAF7Q15545 349 aaPredicted RBP17.63■□□□□ 0.41
UBE2D3-221ENST00000507845 CCDC125Q86Z20 511 aa17.63■□□□□ 0.41
UBE2D3-221ENST00000507845 ATG3Q9NT62 314 aa17.63■□□□□ 0.41
UBE2D3-221ENST00000507845 ASAP1Q9ULH1 1129 aa17.63■□□□□ 0.41
UBE2D3-221ENST00000507845 ZNF521Q96K83 1311 aa17.62■□□□□ 0.41
UBE2D3-221ENST00000507845 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
UBE2D3-221ENST00000507845 KCPQ6ZWJ8 1503 aa17.61■□□□□ 0.41
UBE2D3-221ENST00000507845 BTBD11A6QL63 1104 aa17.6■□□□□ 0.41
UBE2D3-221ENST00000507845 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
UBE2D3-221ENST00000507845 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
UBE2D3-221ENST00000507845 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
UBE2D3-221ENST00000507845 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
UBE2D3-221ENST00000507845 PALLDQ8WX93 1383 aa17.6■□□□□ 0.41
UBE2D3-221ENST00000507845 ZNF831Q5JPB2 1677 aa17.6■□□□□ 0.41
UBE2D3-221ENST00000507845 RREB1Q92766 1687 aa17.6■□□□□ 0.41
UBE2D3-221ENST00000507845 TAF1LQ8IZX4 1826 aa17.59■□□□□ 0.41
UBE2D3-221ENST00000507845 PLSCR1O15162 318 aa17.59■□□□□ 0.41
UBE2D3-221ENST00000507845 WDR63Q8IWG1 891 aa17.59■□□□□ 0.41
UBE2D3-221ENST00000507845 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
UBE2D3-221ENST00000507845 IL16Q14005 1332 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 CHL1O00533 1208 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 KCNQ3O43525 872 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 ZNF853P0CG23 659 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 BAG6P46379 1132 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 ZNF790Q6PG37 636 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 CFAP44Q96MT7 982 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.4
UBE2D3-221ENST00000507845 DEFB132Q7Z7B7 95 aa17.57■□□□□ 0.4
UBE2D3-221ENST00000507845 LAS1LQ9Y4W2 734 aaKnown RBP17.57■□□□□ 0.4
UBE2D3-221ENST00000507845 TJP1Q07157 1748 aa17.57■□□□□ 0.4
UBE2D3-221ENST00000507845 GNAI1P63096 354 aa17.56■□□□□ 0.4
UBE2D3-221ENST00000507845 EN1Q05925 392 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-221ENST00000507845 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
UBE2D3-221ENST00000507845 CAMKK2Q96RR4 588 aa17.56■□□□□ 0.4
UBE2D3-221ENST00000507845 TSPYL4Q9UJ04 414 aa17.56■□□□□ 0.4
UBE2D3-221ENST00000507845 COL5A3P25940 1745 aaPredicted RBP17.55■□□□□ 0.4
UBE2D3-221ENST00000507845 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
UBE2D3-221ENST00000507845 C5P01031 1676 aa17.55■□□□□ 0.4
UBE2D3-221ENST00000507845 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-221ENST00000507845 PROM2Q8N271 834 aa17.55■□□□□ 0.4
UBE2D3-221ENST00000507845 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
UBE2D3-221ENST00000507845 SIK1P57059 783 aa17.54■□□□□ 0.4
UBE2D3-221ENST00000507845 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-221ENST00000507845 TXNRD1Q16881 649 aa17.54■□□□□ 0.4
UBE2D3-221ENST00000507845 ZNF496Q96IT1 587 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-221ENST00000507845 SLC4A9Q96Q91 983 aa17.54■□□□□ 0.4
UBE2D3-221ENST00000507845 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-221ENST00000507845 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
UBE2D3-221ENST00000507845 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
UBE2D3-221ENST00000507845 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
UBE2D3-221ENST00000507845 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
UBE2D3-221ENST00000507845 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
UBE2D3-221ENST00000507845 SOCS7O14512 581 aa17.52■□□□□ 0.4
UBE2D3-221ENST00000507845 EIF4A1P60842 406 aaKnown RBP17.52■□□□□ 0.4
UBE2D3-221ENST00000507845 GOLGA2Q08379 1002 aa17.52■□□□□ 0.4
UBE2D3-221ENST00000507845 SLC27A3Q5K4L6 730 aa17.52■□□□□ 0.4
UBE2D3-221ENST00000507845 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms